RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 OCC1Q8TAD7 63 aa8.65□□□□□ -1.02
VPS18-203ENST00000558855 RPL39LQ96EH5 51 aaKnown RBP8.65□□□□□ -1.02
VPS18-203ENST00000558855 SMIM12Q96EX1 92 aa8.65□□□□□ -1.02
VPS18-203ENST00000558855 CNFNQ9BYD5 112 aa8.65□□□□□ -1.02
VPS18-203ENST00000558855 NIT2Q9NQR4 276 aa8.65□□□□□ -1.02
VPS18-203ENST00000558855 GAS8-AS1O95177 125 aa8.64□□□□□ -1.03
VPS18-203ENST00000558855 DGAT2L7PQ6IED9 249 aa8.64□□□□□ -1.03
VPS18-203ENST00000558855 Q6ZNX1 250 aa8.64□□□□□ -1.03
VPS18-203ENST00000558855 C15orf56Q8N910 161 aa8.64□□□□□ -1.03
VPS18-203ENST00000558855 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.64□□□□□ -1.03
VPS18-203ENST00000558855 PGLYRP4Q96LB8 373 aa8.64□□□□□ -1.03
VPS18-203ENST00000558855 A0A1B0GUV1 79 aa8.63□□□□□ -1.03
VPS18-203ENST00000558855 F2Z2F3 143 aa8.63□□□□□ -1.03
VPS18-203ENST00000558855 H7C1H1 209 aa8.63□□□□□ -1.03
VPS18-203ENST00000558855 TRGC1P0CF51 173 aa8.63□□□□□ -1.03
VPS18-203ENST00000558855 CIRBPQ14011 172 aaKnown RBP8.63□□□□□ -1.03
VPS18-203ENST00000558855 RPP21Q9H633 154 aaKnown RBP8.63□□□□□ -1.03
VPS18-203ENST00000558855 hDV102S1A0JD36 115 aa8.62□□□□□ -1.03
VPS18-203ENST00000558855 AMTP48728 403 aa8.62□□□□□ -1.03
VPS18-203ENST00000558855 CNBPP62633 177 aaKnown RBP8.62□□□□□ -1.03
VPS18-203ENST00000558855 SLC51BQ86UW2 128 aa8.62□□□□□ -1.03
VPS18-203ENST00000558855 MT1HL1P0DM35 61 aa8.61□□□□□ -1.03
VPS18-203ENST00000558855 TWIST1Q15672 202 aa8.61□□□□□ -1.03
VPS18-203ENST00000558855 EIF5AL1Q6IS14 154 aaKnown RBP8.61□□□□□ -1.03
VPS18-203ENST00000558855 WDR73Q6P4I2 378 aa8.61□□□□□ -1.03
VPS18-203ENST00000558855 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.6□□□□□ -1.03
VPS18-203ENST00000558855 IGKV3OR2-268A0A0C4DH90 116 aa8.6□□□□□ -1.03
VPS18-203ENST00000558855 IGKV2-29A2NJV5 120 aaPredicted RBP8.6□□□□□ -1.03
VPS18-203ENST00000558855 XKRY2A2RUG3 117 aa8.6□□□□□ -1.03
VPS18-203ENST00000558855 GAGE12HA6NDE8 117 aa8.6□□□□□ -1.03
VPS18-203ENST00000558855 TEX46H3BTG2 121 aa8.6□□□□□ -1.03
VPS18-203ENST00000558855 OXTP01178 125 aa8.6□□□□□ -1.03
VPS18-203ENST00000558855 COTL1Q14019 142 aa8.6□□□□□ -1.03
VPS18-203ENST00000558855 ALKAL2Q6UX46 152 aa8.6□□□□□ -1.03
VPS18-203ENST00000558855 TRAV8-4A0A0B4J246 113 aa8.59□□□□□ -1.03
VPS18-203ENST00000558855 HIGD2BQ4VC39 106 aa8.59□□□□□ -1.03
VPS18-203ENST00000558855 CLRN3Q8NCR9 226 aa8.59□□□□□ -1.03
VPS18-203ENST00000558855 SPACA4Q8TDM5 124 aa8.59□□□□□ -1.03
VPS18-203ENST00000558855 A0A087WYN8 130 aa8.58□□□□□ -1.04
VPS18-203ENST00000558855 FAM231BA6NCW3 169 aa8.58□□□□□ -1.04
VPS18-203ENST00000558855 hCG_2014768A0A024R1R8 64 aa8.57□□□□□ -1.04
VPS18-203ENST00000558855 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
VPS18-203ENST00000558855 UBE2L6O14933 153 aa8.57□□□□□ -1.04
VPS18-203ENST00000558855 BIN3Q9NQY0 253 aa8.57□□□□□ -1.04
VPS18-203ENST00000558855 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
VPS18-203ENST00000558855 GATCO43716 136 aaKnown RBP8.56□□□□□ -1.04
VPS18-203ENST00000558855 PRSS3P2Q8NHM4 247 aa8.56□□□□□ -1.04
VPS18-203ENST00000558855 LYPD6BQ8NI32 183 aa8.56□□□□□ -1.04
VPS18-203ENST00000558855 CHCHD10Q8WYQ3 142 aaPredicted RBP8.56□□□□□ -1.04
VPS18-203ENST00000558855 TSHBP01222 138 aa8.55□□□□□ -1.04
VPS18-203ENST00000558855 FGF6P10767 208 aa8.55□□□□□ -1.04
VPS18-203ENST00000558855 RPS10P46783 165 aaKnown RBP8.55□□□□□ -1.04
VPS18-203ENST00000558855 FOXI1Q12951 378 aa8.55□□□□□ -1.04
VPS18-203ENST00000558855 FAM231DQ6ZW35 169 aa8.55□□□□□ -1.04
VPS18-203ENST00000558855 RNF185Q96GF1 192 aa8.55□□□□□ -1.04
VPS18-203ENST00000558855 TMEM250H0YL14 139 aa8.54□□□□□ -1.04
VPS18-203ENST00000558855 CEBPGP53567 150 aa8.54□□□□□ -1.04
VPS18-203ENST00000558855 COX6A2Q02221 97 aa8.54□□□□□ -1.04
VPS18-203ENST00000558855 ODF1Q14990 250 aa8.54□□□□□ -1.04
VPS18-203ENST00000558855 RNASEKQ6P5S7 137 aaKnown RBP8.54□□□□□ -1.04
VPS18-203ENST00000558855 LINC00526Q96FQ7 95 aa8.54□□□□□ -1.04
VPS18-203ENST00000558855 TMEM242Q9NWH2 141 aa8.54□□□□□ -1.04
VPS18-203ENST00000558855 PLAC8Q9NZF1 115 aa8.54□□□□□ -1.04
VPS18-203ENST00000558855 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
VPS18-203ENST00000558855 PHOX2AO14813 284 aa8.53□□□□□ -1.04
VPS18-203ENST00000558855 APCSP02743 223 aa8.53□□□□□ -1.04
VPS18-203ENST00000558855 ESDP10768 282 aa8.53□□□□□ -1.04
VPS18-203ENST00000558855 TAGLN2P37802 199 aaKnown RBP8.53□□□□□ -1.04
VPS18-203ENST00000558855 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
VPS18-203ENST00000558855 A0A096LNI7 61 aa8.52□□□□□ -1.05
VPS18-203ENST00000558855 GVQW2A0A096LPI5 108 aaPredicted RBP8.52□□□□□ -1.05
VPS18-203ENST00000558855 SMKR1H3BMG3 65 aa8.52□□□□□ -1.05
VPS18-203ENST00000558855 NCR2O95944 276 aa8.52□□□□□ -1.05
VPS18-203ENST00000558855 SERTAD4-AS1Q5TG53 156 aa8.52□□□□□ -1.05
VPS18-203ENST00000558855 AKAP14Q86UN6 197 aa8.52□□□□□ -1.05
VPS18-203ENST00000558855 IGKV2-24A0A0C4DH68 120 aa8.51□□□□□ -1.05
VPS18-203ENST00000558855 A8MWL6 223 aa8.51□□□□□ -1.05
VPS18-203ENST00000558855 AMMECR1LQ6DCA0 310 aa8.51□□□□□ -1.05
VPS18-203ENST00000558855 LINC01551Q86U37 167 aa8.51□□□□□ -1.05
VPS18-203ENST00000558855 LRP2P98164 4655 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.5□□□□□ -1.05
VPS18-203ENST00000558855 LINC00959A0A1B0GUT2 108 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 HIGD1CA8MV81 97 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 CCL25O15444 150 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 SRP19P09132 144 aaKnown RBP8.5□□□□□ -1.05
VPS18-203ENST00000558855 RAB4AP20338 218 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 PMCHP20382 165 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 XCL1P47992 114 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 POLR2KP53803 58 aaKnown RBP8.5□□□□□ -1.05
VPS18-203ENST00000558855 BLOC1S1P78537 153 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 CT83Q5H943 113 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 AMN1Q8IY45 258 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 OR5A1Q8NGJ0 315 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 SMIM7Q9BQ49 75 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 PLA2G2DQ9UNK4 145 aa8.5□□□□□ -1.05
VPS18-203ENST00000558855 H7C423 109 aa8.49□□□□□ -1.05
VPS18-203ENST00000558855 I3L3M4 83 aa8.49□□□□□ -1.05
VPS18-203ENST00000558855 MAJINQ3KP22 176 aa8.49□□□□□ -1.05
VPS18-203ENST00000558855 V9GYV3 84 aa8.49□□□□□ -1.05
VPS18-203ENST00000558855 A0A1B0GVG6 124 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms