RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 LINC00612Q8N6U2 182 aa9.2□□□□□ -0.94
SMAD3-207ENST00000558763 KIR2DL5BQ8NHK3 375 aa9.2□□□□□ -0.94
SMAD3-207ENST00000558763 FAM104AQ969W3 186 aa9.2□□□□□ -0.94
SMAD3-207ENST00000558763 DNAJC30Q96LL9 226 aa9.2□□□□□ -0.94
SMAD3-207ENST00000558763 LINC01549A6NIU2 74 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 F8VRH5 84 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 DPM2O94777 84 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 GAGE12BA1L429 117 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 A8MZ25 164 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 GAGE7O76087 117 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 GAGE12FP0CL80 117 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 GAGE12GP0CL81 117 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 GAGE12IP0CL82 117 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 COX8AP10176 69 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 G0S2P27469 103 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 DEFB135Q30KP9 77 aa9.19□□□□□ -0.94
SMAD3-207ENST00000558763 IGKV2D-26A0A0A0MRZ7 120 aa9.18□□□□□ -0.94
SMAD3-207ENST00000558763 PRSS29PA6NIE9 313 aa9.18□□□□□ -0.94
SMAD3-207ENST00000558763 K7EQD1 137 aa9.18□□□□□ -0.94
SMAD3-207ENST00000558763 ZC2HC1BQ5TFG8 222 aa9.18□□□□□ -0.94
SMAD3-207ENST00000558763 SLC25A29Q8N8R3 303 aa9.18□□□□□ -0.94
SMAD3-207ENST00000558763 TMEM141Q96I45 108 aa9.18□□□□□ -0.94
SMAD3-207ENST00000558763 CHCHD7Q9BUK0 85 aa9.18□□□□□ -0.94
SMAD3-207ENST00000558763 HNRNPA3P51991 378 aaKnown RBP9.17□□□□□ -0.94
SMAD3-207ENST00000558763 SLC25A34Q6PIV7 304 aa9.17□□□□□ -0.94
SMAD3-207ENST00000558763 MRPL52Q86TS9 123 aaKnown RBP9.17□□□□□ -0.94
SMAD3-207ENST00000558763 MRAPQ8TCY5 172 aa9.17□□□□□ -0.94
SMAD3-207ENST00000558763 MRPS16Q9Y3D3 137 aaKnown RBP9.17□□□□□ -0.94
SMAD3-207ENST00000558763 IGLV4-69A0A075B6H9 119 aa9.17□□□□□ -0.94
SMAD3-207ENST00000558763 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
SMAD3-207ENST00000558763 TCTAP57738 103 aa9.17□□□□□ -0.94
SMAD3-207ENST00000558763 OPRPNQ99935 248 aaPredicted RBP9.17□□□□□ -0.94
SMAD3-207ENST00000558763 CHTOPQ9Y3Y2 248 aaKnown RBP9.17□□□□□ -0.94
SMAD3-207ENST00000558763 IGHV3-38A0A0C4DH36 116 aa9.16□□□□□ -0.94
SMAD3-207ENST00000558763 PLNP26678 52 aa9.16□□□□□ -0.94
SMAD3-207ENST00000558763 C2orf91Q6ZV80 131 aa9.16□□□□□ -0.94
SMAD3-207ENST00000558763 TRBV7-3A0A075B6L6 115 aa9.15□□□□□ -0.94
SMAD3-207ENST00000558763 TRGV2A0A075B6R0 118 aa9.15□□□□□ -0.94
SMAD3-207ENST00000558763 SMIM9A6NGZ8 99 aa9.15□□□□□ -0.94
SMAD3-207ENST00000558763 BOD1L2Q8IYS8 172 aa9.15□□□□□ -0.94
SMAD3-207ENST00000558763 PHLDA1Q8WV24 401 aaPredicted RBP9.15□□□□□ -0.94
SMAD3-207ENST00000558763 C2orf88Q9BSF0 95 aa9.15□□□□□ -0.94
SMAD3-207ENST00000558763 CST9LQ9H4G1 147 aa9.15□□□□□ -0.94
SMAD3-207ENST00000558763 IGLV4-3A0A075B6K6 122 aa9.15□□□□□ -0.95
SMAD3-207ENST00000558763 M0R143 59 aa9.15□□□□□ -0.95
SMAD3-207ENST00000558763 EMP1P54849 157 aa9.15□□□□□ -0.95
SMAD3-207ENST00000558763 UBE2D3P61077 147 aa9.15□□□□□ -0.95
SMAD3-207ENST00000558763 UBE2D2P62837 147 aa9.15□□□□□ -0.95
SMAD3-207ENST00000558763 FHL2Q14192 279 aa9.15□□□□□ -0.95
SMAD3-207ENST00000558763 PMVKQ15126 192 aa9.15□□□□□ -0.95
SMAD3-207ENST00000558763 PCP2Q8IVA1 136 aa9.15□□□□□ -0.95
SMAD3-207ENST00000558763 ZNRF2Q8NHG8 242 aa9.15□□□□□ -0.95
SMAD3-207ENST00000558763 PYGO1Q9Y3Y4 419 aa9.15□□□□□ -0.95
SMAD3-207ENST00000558763 SBSPONQ8IVN8 264 aa9.14□□□□□ -0.95
SMAD3-207ENST00000558763 RETNQ9HD89 108 aa9.14□□□□□ -0.95
SMAD3-207ENST00000558763 TRBV6-4A0A1B0GX49 114 aa9.13□□□□□ -0.95
SMAD3-207ENST00000558763 CIDEAO60543 219 aa9.13□□□□□ -0.95
SMAD3-207ENST00000558763 LINC00694P0DN24 101 aa9.13□□□□□ -0.95
SMAD3-207ENST00000558763 LOC100131303A0A0U1RQF7 123 aa9.13□□□□□ -0.95
SMAD3-207ENST00000558763 C11orf86A6NJI1 115 aa9.13□□□□□ -0.95
SMAD3-207ENST00000558763 DLEU1O43261 78 aa9.13□□□□□ -0.95
SMAD3-207ENST00000558763 LBHQ53QV2 105 aaPredicted RBP9.13□□□□□ -0.95
SMAD3-207ENST00000558763 NTM-AS1Q6ZSK4 140 aa9.13□□□□□ -0.95
SMAD3-207ENST00000558763 Q8NAQ8 132 aa9.13□□□□□ -0.95
SMAD3-207ENST00000558763 TTTY13Q9BZ97 58 aa9.13□□□□□ -0.95
SMAD3-207ENST00000558763 UBE2D4Q9Y2X8 147 aa9.13□□□□□ -0.95
SMAD3-207ENST00000558763 PRKDCP78527 4128 aaKnown RBP9.12□□□□□ -0.95
SMAD3-207ENST00000558763 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-207ENST00000558763 IGKV2-29A2NJV5 120 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-207ENST00000558763 NMUP48645 174 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 RPL36AP83881 106 aaKnown RBP9.12□□□□□ -0.95
SMAD3-207ENST00000558763 COTL1Q14019 142 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 CEMP1Q6PRD7 247 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-207ENST00000558763 RPL36ALQ969Q0 106 aaKnown RBP9.12□□□□□ -0.95
SMAD3-207ENST00000558763 AMELXQ99217 191 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 TENM3Q9P273 2699 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 IGHV4-28A0A0C4DH34 117 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 GAGE12JA6NER3 117 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 GAGE1Q13065 139 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 GAGE4Q13068 117 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 GAGE5Q13069 117 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 GAGE13Q4V321 117 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 OR11H2Q8NH07 326 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 RNF183Q96D59 192 aa9.12□□□□□ -0.95
SMAD3-207ENST00000558763 DEFB130BP0DP73 79 aa9.11□□□□□ -0.95
SMAD3-207ENST00000558763 DEFB130AP0DP74 79 aa9.11□□□□□ -0.95
SMAD3-207ENST00000558763 COL7A1Q02388 2944 aa9.1□□□□□ -0.95
SMAD3-207ENST00000558763 NPSP0C0P6 89 aa9.1□□□□□ -0.95
SMAD3-207ENST00000558763 FAM222AQ5U5X8 452 aa9.1□□□□□ -0.95
SMAD3-207ENST00000558763 DAZ4Q86SG3 579 aaKnown RBP9.1□□□□□ -0.95
SMAD3-207ENST00000558763 NFE4Q86UQ8 179 aa9.1□□□□□ -0.95
SMAD3-207ENST00000558763 DAZ3Q9NR90 486 aaKnown RBP9.1□□□□□ -0.95
SMAD3-207ENST00000558763 TRGV4A0A0C4DH28 118 aa9.1□□□□□ -0.95
SMAD3-207ENST00000558763 DEFB4AO15263 64 aa9.1□□□□□ -0.95
SMAD3-207ENST00000558763 SPANXA1Q9NS26 97 aa9.1□□□□□ -0.95
SMAD3-207ENST00000558763 LYRM9A8MSI8 78 aa9.09□□□□□ -0.95
SMAD3-207ENST00000558763 CRYBA4P53673 196 aa9.09□□□□□ -0.95
SMAD3-207ENST00000558763 Q6ZUT4 128 aa9.09□□□□□ -0.95
SMAD3-207ENST00000558763 HINT1P49773 126 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms