RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 GCHFRP30047 84 aa4.07□□□□□ -1.76
LRRC28-207ENST00000558500 SULT1A2P50226 295 aa4.07□□□□□ -1.76
LRRC28-207ENST00000558500 COX8CQ7Z4L0 72 aa4.07□□□□□ -1.76
LRRC28-207ENST00000558500 Q86TA4 180 aa4.07□□□□□ -1.76
LRRC28-207ENST00000558500 FER1L6-AS1Q8NA97 138 aa4.07□□□□□ -1.76
LRRC28-207ENST00000558500 DIRC1Q969H9 104 aa4.07□□□□□ -1.76
LRRC28-207ENST00000558500 SDHCQ99643 169 aaPredicted RBP4.07□□□□□ -1.76
LRRC28-207ENST00000558500 PLA2G10O15496 165 aa4.06□□□□□ -1.76
LRRC28-207ENST00000558500 SIX6O95475 246 aa4.06□□□□□ -1.76
LRRC28-207ENST00000558500 IL7P13232 177 aa4.06□□□□□ -1.76
LRRC28-207ENST00000558500 CDC34P49427 236 aaPredicted RBP4.06□□□□□ -1.76
LRRC28-207ENST00000558500 LRRC37A5PQ49AS3 106 aa4.06□□□□□ -1.76
LRRC28-207ENST00000558500 C1orf137Q5JT78 98 aa4.06□□□□□ -1.76
LRRC28-207ENST00000558500 FAM162BQ5T6X4 162 aa4.06□□□□□ -1.76
LRRC28-207ENST00000558500 OR10AG1Q8NH19 301 aa4.06□□□□□ -1.76
LRRC28-207ENST00000558500 TMEM243Q9BU79 118 aa4.06□□□□□ -1.76
LRRC28-207ENST00000558500 SMIM3Q9BZL3 60 aa4.06□□□□□ -1.76
LRRC28-207ENST00000558500 NUDT15Q9NV35 164 aa4.06□□□□□ -1.76
LRRC28-207ENST00000558500 HSPB11Q9Y547 144 aa4.06□□□□□ -1.76
LRRC28-207ENST00000558500 IGKV3OR2-268A0A0C4DH90 116 aa4.05□□□□□ -1.76
LRRC28-207ENST00000558500 A0A1W2PNN7 141 aa4.05□□□□□ -1.76
LRRC28-207ENST00000558500 H0Y9J4 135 aa4.05□□□□□ -1.76
LRRC28-207ENST00000558500 IGLV7-43P04211 117 aa4.05□□□□□ -1.76
LRRC28-207ENST00000558500 KRTAP1-4P0C5Y4 121 aa4.05□□□□□ -1.76
LRRC28-207ENST00000558500 ZNF674Q2M3X9 581 aa4.05□□□□□ -1.76
LRRC28-207ENST00000558500 SUMO4Q6EEV6 95 aa4.05□□□□□ -1.76
LRRC28-207ENST00000558500 CHCHD10Q8WYQ3 142 aaPredicted RBP4.05□□□□□ -1.76
LRRC28-207ENST00000558500 CARD19Q96LW7 228 aa4.05□□□□□ -1.76
LRRC28-207ENST00000558500 ZNF471Q9BX82 626 aaPredicted RBP4.05□□□□□ -1.76
LRRC28-207ENST00000558500 WFDC1Q9HC57 220 aa4.05□□□□□ -1.76
LRRC28-207ENST00000558500 TMEM167BQ9NRX6 74 aa4.05□□□□□ -1.76
LRRC28-207ENST00000558500 ZFP30Q9Y2G7 519 aa4.05□□□□□ -1.76
LRRC28-207ENST00000558500 TRAV1-1A0A0B4J248 108 aa4.04□□□□□ -1.76
LRRC28-207ENST00000558500 A0A1W2PRE2 83 aa4.04□□□□□ -1.76
LRRC28-207ENST00000558500 PEX7O00628 323 aa4.04□□□□□ -1.76
LRRC28-207ENST00000558500 LYRM1O43325 122 aa4.04□□□□□ -1.76
LRRC28-207ENST00000558500 RPL12P30050 165 aaKnown RBP4.04□□□□□ -1.76
LRRC28-207ENST00000558500 AMTP48728 403 aa4.04□□□□□ -1.76
LRRC28-207ENST00000558500 LINC00526Q96FQ7 95 aa4.04□□□□□ -1.76
LRRC28-207ENST00000558500 MUC21A0A140T8X8 626 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 M0QY20 66 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 UBE2L6O14933 153 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 SNAI2O43623 268 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 CXorf1O96002 111 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 SMIM17P0DL12 118 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 RPL13AP40429 203 aaKnown RBP4.03□□□□□ -1.76
LRRC28-207ENST00000558500 UBE2D1P51668 147 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 SYCNQ0VAF6 134 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 GAGE2BQ13066 116 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 C9orf116Q5BN46 136 aaPredicted RBP4.03□□□□□ -1.76
LRRC28-207ENST00000558500 SPANXN1Q5VSR9 72 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 PET117Q6UWS5 81 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 HIST1H2BAQ96A08 127 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 PGLYRP4Q96LB8 373 aa4.03□□□□□ -1.76
LRRC28-207ENST00000558500 LOC107984640A0A0U1RRK4 108 aa4.02□□□□□ -1.77
LRRC28-207ENST00000558500 VCYO14598 125 aa4.02□□□□□ -1.77
LRRC28-207ENST00000558500 CXCL1P09341 107 aa4.02□□□□□ -1.77
LRRC28-207ENST00000558500 NKX2-5P52952 324 aaPredicted RBP4.02□□□□□ -1.77
LRRC28-207ENST00000558500 DEFA3P59666 94 aa4.02□□□□□ -1.77
LRRC28-207ENST00000558500 CYCSP99999 105 aaKnown RBP4.02□□□□□ -1.77
LRRC28-207ENST00000558500 PHF5AQ7RTV0 110 aaKnown RBP4.02□□□□□ -1.77
LRRC28-207ENST00000558500 PPP1R1CQ8WVI7 109 aa4.02□□□□□ -1.77
LRRC28-207ENST00000558500 TMEM18Q96B42 140 aa4.02□□□□□ -1.77
LRRC28-207ENST00000558500 AP1S3Q96PC3 154 aa4.02□□□□□ -1.77
LRRC28-207ENST00000558500 MED28Q9H204 178 aa4.02□□□□□ -1.77
LRRC28-207ENST00000558500 IGHV1-58A0A0C4DH39 117 aa4.01□□□□□ -1.77
LRRC28-207ENST00000558500 MPC2O95563 127 aa4.01□□□□□ -1.77
LRRC28-207ENST00000558500 TSPAN13O95857 204 aa4.01□□□□□ -1.77
LRRC28-207ENST00000558500 LTAP01374 205 aa4.01□□□□□ -1.77
LRRC28-207ENST00000558500 OR5AL1P0C617 328 aa4.01□□□□□ -1.77
LRRC28-207ENST00000558500 UBE2G2P60604 165 aa4.01□□□□□ -1.77
LRRC28-207ENST00000558500 SSTP61278 116 aa4.01□□□□□ -1.77
LRRC28-207ENST00000558500 UBE2G1P62253 170 aa4.01□□□□□ -1.77
LRRC28-207ENST00000558500 EIF5AP63241 154 aaKnown RBP4.01□□□□□ -1.77
LRRC28-207ENST00000558500 FMC1Q96HJ9 113 aa4.01□□□□□ -1.77
LRRC28-207ENST00000558500 ACTR3CQ9C0K3 210 aaPredicted RBP4.01□□□□□ -1.77
LRRC28-207ENST00000558500 A0A087WZ39 114 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 CCDC160A6NGH7 325 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 FAM74A7A6NL05 159 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 MBP02144 154 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 MGPP08493 103 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 PET100P0DJ07 73 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 BCL2P10415 239 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 FGF6P10767 208 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 ATP6V0CP27449 155 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 XCL1P47992 114 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 H2BFSP57053 126 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 COTL1Q14019 142 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 AMMECR1LQ6DCA0 310 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 RASL11AQ6T310 242 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 KRTAP11-1Q8IUC1 163 aa4□□□□□ -1.77
LRRC28-207ENST00000558500 PSMG3Q9BT73 122 aaPredicted RBP4□□□□□ -1.77
LRRC28-207ENST00000558500 NKX6-2Q9C056 277 aaPredicted RBP4□□□□□ -1.77
LRRC28-207ENST00000558500 CARHSP1Q9Y2V2 147 aaKnown RBP4□□□□□ -1.77
LRRC28-207ENST00000558500 FAM240BA0A1B0GVZ2 78 aa3.99□□□□□ -1.77
LRRC28-207ENST00000558500 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.99□□□□□ -1.77
LRRC28-207ENST00000558500 SERF2P84101 59 aa3.99□□□□□ -1.77
LRRC28-207ENST00000558500 MEF2BQ02080 365 aaPredicted RBP3.99□□□□□ -1.77
LRRC28-207ENST00000558500 ISOC2Q96AB3 205 aa3.99□□□□□ -1.77
LRRC28-207ENST00000558500 NIT2Q9NQR4 276 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms