RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 IGLV10-54A0A075B6I4 117 aa8.78□□□□□ -1
SNRPA1-204ENST00000558020 hDV102S1A0JD36 115 aa8.78□□□□□ -1
SNRPA1-204ENST00000558020 KRTAP10-4P60372 401 aaPredicted RBP8.78□□□□□ -1
SNRPA1-204ENST00000558020 COTL1Q14019 142 aa8.78□□□□□ -1
SNRPA1-204ENST00000558020 TWIST1Q15672 202 aa8.78□□□□□ -1
SNRPA1-204ENST00000558020 KRTAP26-1Q6PEX3 210 aa8.78□□□□□ -1
SNRPA1-204ENST00000558020 AMTP48728 403 aa8.77□□□□□ -1.01
SNRPA1-204ENST00000558020 CNBPP62633 177 aaKnown RBP8.77□□□□□ -1.01
SNRPA1-204ENST00000558020 CFAP161Q6P656 301 aa8.77□□□□□ -1.01
SNRPA1-204ENST00000558020 SDIM1Q6ZPB5 146 aa8.77□□□□□ -1.01
SNRPA1-204ENST00000558020 SMIM15Q7Z3B0 74 aa8.77□□□□□ -1.01
SNRPA1-204ENST00000558020 IGHV3-64A0A075B6Q5 118 aa8.76□□□□□ -1.01
SNRPA1-204ENST00000558020 BCL2P10415 239 aa8.76□□□□□ -1.01
SNRPA1-204ENST00000558020 C20orf203Q8NBC4 194 aa8.76□□□□□ -1.01
SNRPA1-204ENST00000558020 NUDT10Q8NFP7 164 aa8.76□□□□□ -1.01
SNRPA1-204ENST00000558020 NUDT11Q96G61 164 aa8.76□□□□□ -1.01
SNRPA1-204ENST00000558020 TRBV20OR9-2A0A075B6H5 130 aa8.75□□□□□ -1.01
SNRPA1-204ENST00000558020 CTRLP40313 264 aa8.75□□□□□ -1.01
SNRPA1-204ENST00000558020 TEX261Q6UWH6 196 aa8.75□□□□□ -1.01
SNRPA1-204ENST00000558020 SLC51BQ86UW2 128 aa8.75□□□□□ -1.01
SNRPA1-204ENST00000558020 IGLV4-60A0A075B6I1 120 aa8.74□□□□□ -1.01
SNRPA1-204ENST00000558020 RNF185Q96GF1 192 aa8.74□□□□□ -1.01
SNRPA1-204ENST00000558020 CNFNQ9BYD5 112 aa8.74□□□□□ -1.01
SNRPA1-204ENST00000558020 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
SNRPA1-204ENST00000558020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.74□□□□□ -1.01
SNRPA1-204ENST00000558020 AMMECR1LQ6DCA0 310 aa8.73□□□□□ -1.01
SNRPA1-204ENST00000558020 H7C423 109 aa8.72□□□□□ -1.01
SNRPA1-204ENST00000558020 NCR2O95944 276 aa8.72□□□□□ -1.01
SNRPA1-204ENST00000558020 GATD1Q8NB37 220 aa8.72□□□□□ -1.01
SNRPA1-204ENST00000558020 OCC1Q8TAD7 63 aa8.72□□□□□ -1.01
SNRPA1-204ENST00000558020 CIRBPQ14011 172 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-204ENST00000558020 RNASE7Q9H1E1 156 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-204ENST00000558020 GAGE12HA6NDE8 117 aa8.7□□□□□ -1.02
SNRPA1-204ENST00000558020 A8MWL6 223 aa8.7□□□□□ -1.02
SNRPA1-204ENST00000558020 RNASEKQ6P5S7 137 aaKnown RBP8.7□□□□□ -1.02
SNRPA1-204ENST00000558020 GFRA4Q9GZZ7 299 aa8.7□□□□□ -1.02
SNRPA1-204ENST00000558020 TRAV26-2A0A0B4J265 109 aa8.69□□□□□ -1.02
SNRPA1-204ENST00000558020 IGKV3OR2-268A0A0C4DH90 116 aa8.69□□□□□ -1.02
SNRPA1-204ENST00000558020 A0A1B0GVG6 124 aa8.69□□□□□ -1.02
SNRPA1-204ENST00000558020 TMEM250H0YL14 139 aa8.69□□□□□ -1.02
SNRPA1-204ENST00000558020 PANO1I0J062 215 aa8.69□□□□□ -1.02
SNRPA1-204ENST00000558020 RPS10P46783 165 aaKnown RBP8.69□□□□□ -1.02
SNRPA1-204ENST00000558020 BLOC1S1P78537 153 aa8.69□□□□□ -1.02
SNRPA1-204ENST00000558020 Q6ZRU5 148 aa8.69□□□□□ -1.02
SNRPA1-204ENST00000558020 BORCS7Q96B45 105 aa8.69□□□□□ -1.02
SNRPA1-204ENST00000558020 BTF3L4Q96K17 158 aa8.69□□□□□ -1.02
SNRPA1-204ENST00000558020 FAM210AQ96ND0 272 aa8.69□□□□□ -1.02
SNRPA1-204ENST00000558020 A0A087WYN8 130 aa8.68□□□□□ -1.02
SNRPA1-204ENST00000558020 K7EN84 100 aa8.68□□□□□ -1.02
SNRPA1-204ENST00000558020 GATCO43716 136 aaKnown RBP8.68□□□□□ -1.02
SNRPA1-204ENST00000558020 APCSP02743 223 aa8.68□□□□□ -1.02
SNRPA1-204ENST00000558020 PMCHP20382 165 aa8.68□□□□□ -1.02
SNRPA1-204ENST00000558020 C7orf33Q8WU49 177 aa8.68□□□□□ -1.02
SNRPA1-204ENST00000558020 TMEM101Q96IK0 257 aa8.68□□□□□ -1.02
SNRPA1-204ENST00000558020 PLA2G2DQ9UNK4 145 aa8.68□□□□□ -1.02
SNRPA1-204ENST00000558020 SDHAF1A6NFY7 115 aa8.67□□□□□ -1.02
SNRPA1-204ENST00000558020 I3L3M4 83 aa8.67□□□□□ -1.02
SNRPA1-204ENST00000558020 SLPIP03973 132 aa8.67□□□□□ -1.02
SNRPA1-204ENST00000558020 ZNF25P17030 456 aaPredicted RBP8.67□□□□□ -1.02
SNRPA1-204ENST00000558020 SPACA4Q8TDM5 124 aa8.67□□□□□ -1.02
SNRPA1-204ENST00000558020 GTSF1Q8WW33 167 aa8.67□□□□□ -1.02
SNRPA1-204ENST00000558020 CHCHD10Q8WYQ3 142 aaPredicted RBP8.67□□□□□ -1.02
SNRPA1-204ENST00000558020 RPL39LQ96EH5 51 aaKnown RBP8.67□□□□□ -1.02
SNRPA1-204ENST00000558020 PKIGQ9Y2B9 76 aa8.67□□□□□ -1.02
SNRPA1-204ENST00000558020 LRP1Q07954 4544 aaKnown RBP8.66□□□□□ -1.02
SNRPA1-204ENST00000558020 FGF6P10767 208 aa8.66□□□□□ -1.02
SNRPA1-204ENST00000558020 FAM231DQ6ZW35 169 aa8.66□□□□□ -1.02
SNRPA1-204ENST00000558020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.65□□□□□ -1.02
SNRPA1-204ENST00000558020 IGKV2-29A2NJV5 120 aaPredicted RBP8.65□□□□□ -1.02
SNRPA1-204ENST00000558020 NDUFS6O75380 124 aaKnown RBP8.65□□□□□ -1.02
SNRPA1-204ENST00000558020 CHTF8P0CG12 524 aa8.65□□□□□ -1.02
SNRPA1-204ENST00000558020 HNRNPA3P51991 378 aaKnown RBP8.65□□□□□ -1.02
SNRPA1-204ENST00000558020 FOXA3P55318 350 aaPredicted RBP8.65□□□□□ -1.02
SNRPA1-204ENST00000558020 COX6A2Q02221 97 aa8.65□□□□□ -1.02
SNRPA1-204ENST00000558020 CT83Q5H943 113 aa8.65□□□□□ -1.02
SNRPA1-204ENST00000558020 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
SNRPA1-204ENST00000558020 ST20Q9HBF5 79 aa8.65□□□□□ -1.02
SNRPA1-204ENST00000558020 PLAC8Q9NZF1 115 aa8.65□□□□□ -1.02
SNRPA1-204ENST00000558020 TRBV6-5A0A0K0K1A5 114 aa8.64□□□□□ -1.03
SNRPA1-204ENST00000558020 CEBPGP53567 150 aa8.64□□□□□ -1.03
SNRPA1-204ENST00000558020 HIGD2BQ4VC39 106 aa8.64□□□□□ -1.03
SNRPA1-204ENST00000558020 OR5A1Q8NGJ0 315 aa8.64□□□□□ -1.03
SNRPA1-204ENST00000558020 LINC00474Q9P2X8 69 aa8.64□□□□□ -1.03
SNRPA1-204ENST00000558020 GVQW2A0A096LPI5 108 aaPredicted RBP8.63□□□□□ -1.03
SNRPA1-204ENST00000558020 A0A1B0GUT8 65 aa8.63□□□□□ -1.03
SNRPA1-204ENST00000558020 MAJINQ3KP22 176 aa8.63□□□□□ -1.03
SNRPA1-204ENST00000558020 MRAP2Q96G30 205 aa8.63□□□□□ -1.03
SNRPA1-204ENST00000558020 EIF5A2Q9GZV4 153 aaKnown RBP8.63□□□□□ -1.03
SNRPA1-204ENST00000558020 FAM231BA6NCW3 169 aa8.62□□□□□ -1.03
SNRPA1-204ENST00000558020 XCL1P47992 114 aa8.62□□□□□ -1.03
SNRPA1-204ENST00000558020 SMAGPQ0VAQ4 97 aa8.62□□□□□ -1.03
SNRPA1-204ENST00000558020 SS18Q15532 418 aa8.62□□□□□ -1.03
SNRPA1-204ENST00000558020 ALKAL2Q6UX46 152 aa8.62□□□□□ -1.03
SNRPA1-204ENST00000558020 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
SNRPA1-204ENST00000558020 IGKV2-24A0A0C4DH68 120 aa8.61□□□□□ -1.03
SNRPA1-204ENST00000558020 PPP1R17O96001 155 aa8.61□□□□□ -1.03
SNRPA1-204ENST00000558020 FOXI1Q12951 378 aa8.61□□□□□ -1.03
SNRPA1-204ENST00000558020 PRSS3P2Q8NHM4 247 aa8.61□□□□□ -1.03
SNRPA1-204ENST00000558020 LYPD6BQ8NI32 183 aa8.61□□□□□ -1.03
SNRPA1-204ENST00000558020 TSKUQ8WUA8 353 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms