RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 FAM229AH3BQW9 127 aa10.92□□□□□ -0.66
NEDD4-212ENST00000557845 COTL1Q14019 142 aa10.92□□□□□ -0.66
NEDD4-212ENST00000557845 C14orf177Q52M58 125 aa10.92□□□□□ -0.66
NEDD4-212ENST00000557845 C20orf203Q8NBC4 194 aa10.92□□□□□ -0.66
NEDD4-212ENST00000557845 HLA-DQA1P01909 254 aa10.91□□□□□ -0.66
NEDD4-212ENST00000557845 REG3AQ06141 175 aa10.91□□□□□ -0.66
NEDD4-212ENST00000557845 KRTAP26-1Q6PEX3 210 aa10.91□□□□□ -0.66
NEDD4-212ENST00000557845 TEX261Q6UWH6 196 aa10.91□□□□□ -0.66
NEDD4-212ENST00000557845 RPL39LQ96EH5 51 aaKnown RBP10.91□□□□□ -0.66
NEDD4-212ENST00000557845 OSTCQ9NRP0 149 aa10.91□□□□□ -0.66
NEDD4-212ENST00000557845 IGLV4-60A0A075B6I1 120 aa10.9□□□□□ -0.66
NEDD4-212ENST00000557845 USP17L23D6RBM5 183 aa10.9□□□□□ -0.66
NEDD4-212ENST00000557845 INAFM2P0DMQ5 153 aa10.9□□□□□ -0.66
NEDD4-212ENST00000557845 AMTP48728 403 aa10.9□□□□□ -0.66
NEDD4-212ENST00000557845 TSKUQ8WUA8 353 aa10.9□□□□□ -0.66
NEDD4-212ENST00000557845 BORCS7Q96B45 105 aa10.9□□□□□ -0.66
NEDD4-212ENST00000557845 GFRA4Q9GZZ7 299 aa10.9□□□□□ -0.66
NEDD4-212ENST00000557845 UBE2L6O14933 153 aa10.89□□□□□ -0.67
NEDD4-212ENST00000557845 TRAV8-4A0A0B4J246 113 aa10.88□□□□□ -0.67
NEDD4-212ENST00000557845 FAM231BA6NCW3 169 aa10.88□□□□□ -0.67
NEDD4-212ENST00000557845 HIGD1CA8MV81 97 aa10.88□□□□□ -0.67
NEDD4-212ENST00000557845 TMEM241Q24JQ0 296 aa10.88□□□□□ -0.67
NEDD4-212ENST00000557845 FAM74A3Q4VXF1 159 aa10.88□□□□□ -0.67
NEDD4-212ENST00000557845 IGLV10-54A0A075B6I4 117 aa10.87□□□□□ -0.67
NEDD4-212ENST00000557845 A0A1B0GUT8 65 aa10.87□□□□□ -0.67
NEDD4-212ENST00000557845 VPS13BQ7Z7G8 4022 aa10.87□□□□□ -0.67
NEDD4-212ENST00000557845 C9JQL5 133 aa10.86□□□□□ -0.67
NEDD4-212ENST00000557845 NCR2O95944 276 aa10.86□□□□□ -0.67
NEDD4-212ENST00000557845 PRSS1P07477 247 aa10.86□□□□□ -0.67
NEDD4-212ENST00000557845 ISOC2Q96AB3 205 aa10.86□□□□□ -0.67
NEDD4-212ENST00000557845 TMEM191AQ9H0A3 160 aa10.86□□□□□ -0.67
NEDD4-212ENST00000557845 V9GYV3 84 aa10.86□□□□□ -0.67
NEDD4-212ENST00000557845 TRBV6-5A0A0K0K1A5 114 aa10.85□□□□□ -0.67
NEDD4-212ENST00000557845 SDHAF1A6NFY7 115 aa10.85□□□□□ -0.67
NEDD4-212ENST00000557845 RPL23P62829 140 aaKnown RBP10.85□□□□□ -0.67
NEDD4-212ENST00000557845 PEA15Q15121 130 aa10.85□□□□□ -0.67
NEDD4-212ENST00000557845 DGAT2L7PQ6IED9 249 aa10.85□□□□□ -0.67
NEDD4-212ENST00000557845 GAS8-AS1O95177 125 aa10.84□□□□□ -0.67
NEDD4-212ENST00000557845 RAB4AP20338 218 aa10.84□□□□□ -0.67
NEDD4-212ENST00000557845 SRSF3P84103 164 aaKnown RBP10.84□□□□□ -0.67
NEDD4-212ENST00000557845 CLRN3Q8NCR9 226 aa10.84□□□□□ -0.67
NEDD4-212ENST00000557845 NUP35Q8NFH5 326 aa10.84□□□□□ -0.67
NEDD4-212ENST00000557845 RNF185Q96GF1 192 aa10.84□□□□□ -0.67
NEDD4-212ENST00000557845 H7C423 109 aa10.83□□□□□ -0.68
NEDD4-212ENST00000557845 I3L3M4 83 aa10.83□□□□□ -0.68
NEDD4-212ENST00000557845 APCSP02743 223 aa10.83□□□□□ -0.68
NEDD4-212ENST00000557845 PMCHP20382 165 aa10.83□□□□□ -0.68
NEDD4-212ENST00000557845 SCXQ7RTU7 201 aa10.83□□□□□ -0.68
NEDD4-212ENST00000557845 CHAC1Q9BUX1 264 aa10.83□□□□□ -0.68
NEDD4-212ENST00000557845 SMDT1Q9H4I9 107 aa10.83□□□□□ -0.68
NEDD4-212ENST00000557845 NAT8Q9UHE5 227 aa10.83□□□□□ -0.68
NEDD4-212ENST00000557845 RIGQ13278 110 aa10.82□□□□□ -0.68
NEDD4-212ENST00000557845 ADIRFQ15847 76 aa10.82□□□□□ -0.68
NEDD4-212ENST00000557845 AMMECR1LQ6DCA0 310 aa10.82□□□□□ -0.68
NEDD4-212ENST00000557845 AMN1Q8IY45 258 aa10.82□□□□□ -0.68
NEDD4-212ENST00000557845 ST20Q9HBF5 79 aa10.82□□□□□ -0.68
NEDD4-212ENST00000557845 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.81□□□□□ -0.68
NEDD4-212ENST00000557845 IGKV2-29A2NJV5 120 aaPredicted RBP10.81□□□□□ -0.68
NEDD4-212ENST00000557845 RNASEKQ6P5S7 137 aaKnown RBP10.81□□□□□ -0.68
NEDD4-212ENST00000557845 LINC00528Q8N1L1 170 aa10.81□□□□□ -0.68
NEDD4-212ENST00000557845 C9orf163Q8N9P6 203 aa10.81□□□□□ -0.68
NEDD4-212ENST00000557845 CIRBP-AS1Q8TBR5 109 aa10.81□□□□□ -0.68
NEDD4-212ENST00000557845 MRAP2Q96G30 205 aa10.81□□□□□ -0.68
NEDD4-212ENST00000557845 NAT8BQ9UHF3 227 aa10.81□□□□□ -0.68
NEDD4-212ENST00000557845 PLA2G1BP04054 148 aaKnown RBP10.8□□□□□ -0.68
NEDD4-212ENST00000557845 FGF6P10767 208 aa10.8□□□□□ -0.68
NEDD4-212ENST00000557845 RPS10P46783 165 aaKnown RBP10.8□□□□□ -0.68
NEDD4-212ENST00000557845 POLR2KP53803 58 aaKnown RBP10.8□□□□□ -0.68
NEDD4-212ENST00000557845 IGKV3OR2-268A0A0C4DH90 116 aa10.79□□□□□ -0.68
NEDD4-212ENST00000557845 TSHBP01222 138 aa10.79□□□□□ -0.68
NEDD4-212ENST00000557845 SMIM27A0A1W2PRY6 76 aa10.78□□□□□ -0.68
NEDD4-212ENST00000557845 hDV102S1A0JD36 115 aa10.78□□□□□ -0.68
NEDD4-212ENST00000557845 ESDP10768 282 aa10.78□□□□□ -0.68
NEDD4-212ENST00000557845 SRRM2Q9UQ35 2752 aaKnown RBP10.77□□□□□ -0.68
NEDD4-212ENST00000557845 TRBV27A0A0K0K1C4 114 aa10.77□□□□□ -0.69
NEDD4-212ENST00000557845 GAGE12HA6NDE8 117 aa10.77□□□□□ -0.69
NEDD4-212ENST00000557845 ZNF25P17030 456 aaPredicted RBP10.77□□□□□ -0.69
NEDD4-212ENST00000557845 TMEM242Q9NWH2 141 aa10.77□□□□□ -0.69
NEDD4-212ENST00000557845 SMKR1H3BMG3 65 aa10.76□□□□□ -0.69
NEDD4-212ENST00000557845 CNBPP62633 177 aaKnown RBP10.76□□□□□ -0.69
NEDD4-212ENST00000557845 SDIM1Q6ZPB5 146 aa10.76□□□□□ -0.69
NEDD4-212ENST00000557845 TMEM101Q96IK0 257 aa10.76□□□□□ -0.69
NEDD4-212ENST00000557845 BTF3L4Q96K17 158 aa10.76□□□□□ -0.69
NEDD4-212ENST00000557845 VCYO14598 125 aa10.75□□□□□ -0.69
NEDD4-212ENST00000557845 PPP1R17O96001 155 aa10.75□□□□□ -0.69
NEDD4-212ENST00000557845 SLPIP03973 132 aa10.75□□□□□ -0.69
NEDD4-212ENST00000557845 CFAP161Q6P656 301 aa10.75□□□□□ -0.69
NEDD4-212ENST00000557845 OR5A1Q8NGJ0 315 aa10.75□□□□□ -0.69
NEDD4-212ENST00000557845 CHCHD10Q8WYQ3 142 aaPredicted RBP10.75□□□□□ -0.69
NEDD4-212ENST00000557845 AP5S1Q9NUS5 200 aa10.75□□□□□ -0.69
NEDD4-212ENST00000557845 CAMPP49913 170 aa10.74□□□□□ -0.69
NEDD4-212ENST00000557845 FAM104BQ5XKR9 115 aa10.74□□□□□ -0.69
NEDD4-212ENST00000557845 NRACQ8N912 160 aa10.74□□□□□ -0.69
NEDD4-212ENST00000557845 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.73□□□□□ -0.69
NEDD4-212ENST00000557845 A0A1B0GW15 77 aa10.73□□□□□ -0.69
NEDD4-212ENST00000557845 SUMO2P61956 95 aaKnown RBP10.73□□□□□ -0.69
NEDD4-212ENST00000557845 MRPL51Q4U2R6 128 aaKnown RBP10.73□□□□□ -0.69
NEDD4-212ENST00000557845 C15orf56Q8N910 161 aa10.73□□□□□ -0.69
NEDD4-212ENST00000557845 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.73□□□□□ -0.69
NEDD4-212ENST00000557845 C7orf77A4D0Y5 90 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms