RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 HTN1P15515 57 aa8.65□□□□□ -1.03
VIPAS39-211ENST00000557658 C10orf99Q6UWK7 81 aa8.65□□□□□ -1.03
VIPAS39-211ENST00000557658 SVIPQ8NHG7 77 aa8.65□□□□□ -1.03
VIPAS39-211ENST00000557658 IGHV4-30-2A0A087WSY4 118 aa8.64□□□□□ -1.03
VIPAS39-211ENST00000557658 H7C423 109 aa8.64□□□□□ -1.03
VIPAS39-211ENST00000557658 NDUFV3P56181 108 aaKnown RBP8.64□□□□□ -1.03
VIPAS39-211ENST00000557658 PROK1P58294 105 aa8.64□□□□□ -1.03
VIPAS39-211ENST00000557658 LY6DQ14210 128 aa8.64□□□□□ -1.03
VIPAS39-211ENST00000557658 TTC32Q5I0X7 151 aa8.64□□□□□ -1.03
VIPAS39-211ENST00000557658 CELSR1Q9NYQ6 3014 aa8.64□□□□□ -1.03
VIPAS39-211ENST00000557658 NHLRC4P0CG21 123 aaPredicted RBP8.64□□□□□ -1.03
VIPAS39-211ENST00000557658 RBMY1A1P0DJD3 496 aaKnown RBP8.64□□□□□ -1.03
VIPAS39-211ENST00000557658 RBMY1CP0DJD4 496 aa8.64□□□□□ -1.03
VIPAS39-211ENST00000557658 RBMY1FQ15415 496 aaKnown RBP8.64□□□□□ -1.03
VIPAS39-211ENST00000557658 AVPP01185 164 aa8.63□□□□□ -1.03
VIPAS39-211ENST00000557658 ATP5J2P56134 94 aa8.63□□□□□ -1.03
VIPAS39-211ENST00000557658 NPC2P61916 151 aa8.63□□□□□ -1.03
VIPAS39-211ENST00000557658 TMEM61Q8N0U2 210 aa8.63□□□□□ -1.03
VIPAS39-211ENST00000557658 C15orf53Q8NAA6 179 aa8.63□□□□□ -1.03
VIPAS39-211ENST00000557658 CHCHD7Q9BUK0 85 aa8.63□□□□□ -1.03
VIPAS39-211ENST00000557658 UBE2D4Q9Y2X8 147 aa8.63□□□□□ -1.03
VIPAS39-211ENST00000557658 TIMM17BO60830 172 aa8.63□□□□□ -1.03
VIPAS39-211ENST00000557658 IGHV4-59P01825 116 aa8.63□□□□□ -1.03
VIPAS39-211ENST00000557658 IFITM1P13164 125 aa8.63□□□□□ -1.03
VIPAS39-211ENST00000557658 KNCNA6PVL3 124 aa8.62□□□□□ -1.03
VIPAS39-211ENST00000557658 A8MZ25 164 aa8.62□□□□□ -1.03
VIPAS39-211ENST00000557658 NACAE9PAV3 2078 aa8.62□□□□□ -1.03
VIPAS39-211ENST00000557658 B4DSR2 109 aa8.62□□□□□ -1.03
VIPAS39-211ENST00000557658 LST1O00453 97 aa8.62□□□□□ -1.03
VIPAS39-211ENST00000557658 PIK3CD-AS1Q5SR53 167 aa8.62□□□□□ -1.03
VIPAS39-211ENST00000557658 CLEC2BQ92478 149 aa8.62□□□□□ -1.03
VIPAS39-211ENST00000557658 DUX5Q96PT3 197 aa8.62□□□□□ -1.03
VIPAS39-211ENST00000557658 DUX3Q96PT4 197 aa8.62□□□□□ -1.03
VIPAS39-211ENST00000557658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.61□□□□□ -1.03
VIPAS39-211ENST00000557658 IGKV2-29A2NJV5 120 aaPredicted RBP8.61□□□□□ -1.03
VIPAS39-211ENST00000557658 GNLYP22749 145 aa8.61□□□□□ -1.03
VIPAS39-211ENST00000557658 ZNF415Q09FC8 603 aa8.61□□□□□ -1.03
VIPAS39-211ENST00000557658 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
VIPAS39-211ENST00000557658 HOXD3P31249 432 aaPredicted RBP8.61□□□□□ -1.03
VIPAS39-211ENST00000557658 DEFB112Q30KQ8 113 aa8.61□□□□□ -1.03
VIPAS39-211ENST00000557658 Q6ZSV7 163 aa8.61□□□□□ -1.03
VIPAS39-211ENST00000557658 SS18L2Q9UHA2 77 aa8.61□□□□□ -1.03
VIPAS39-211ENST00000557658 CSPG4Q6UVK1 2322 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 B5MCH6 92 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 LINC00467Q9BRT7 94 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 GAGE7O76087 117 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 GAGE12FP0CL80 117 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 GAGE12GP0CL81 117 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 GAGE12IP0CL82 117 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 DEFB131AP59861 70 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 GAGE4Q13068 117 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 Q6ZSN1 163 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 DNAJC30Q96LL9 226 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 Q9UF83 564 aa8.6□□□□□ -1.03
VIPAS39-211ENST00000557658 FAM240AA0A1B0GVK7 77 aa8.59□□□□□ -1.03
VIPAS39-211ENST00000557658 NDUFA1O15239 70 aa8.59□□□□□ -1.03
VIPAS39-211ENST00000557658 CIRBPQ14011 172 aaKnown RBP8.59□□□□□ -1.03
VIPAS39-211ENST00000557658 DEFB121Q5J5C9 76 aa8.59□□□□□ -1.03
VIPAS39-211ENST00000557658 A8MTW9 85 aa8.59□□□□□ -1.03
VIPAS39-211ENST00000557658 TIRAPP58753 221 aa8.59□□□□□ -1.03
VIPAS39-211ENST00000557658 CDKN2A-AS1Q9UH64 79 aa8.58□□□□□ -1.04
VIPAS39-211ENST00000557658 IGHV3-53P01767 116 aa8.58□□□□□ -1.04
VIPAS39-211ENST00000557658 DAND5Q8N907 189 aa8.58□□□□□ -1.04
VIPAS39-211ENST00000557658 UBE2E2Q96LR5 201 aa8.58□□□□□ -1.04
VIPAS39-211ENST00000557658 IGLV5-45A0A087WSX0 123 aa8.57□□□□□ -1.04
VIPAS39-211ENST00000557658 IGHV3-38A0A0C4DH36 116 aa8.57□□□□□ -1.04
VIPAS39-211ENST00000557658 PRM2P04554 102 aa8.57□□□□□ -1.04
VIPAS39-211ENST00000557658 DGAT2L7PQ6IED9 249 aa8.57□□□□□ -1.04
VIPAS39-211ENST00000557658 TMEM101Q96IK0 257 aa8.57□□□□□ -1.04
VIPAS39-211ENST00000557658 RBMY1BA6NDE4 496 aaKnown RBP8.57□□□□□ -1.04
VIPAS39-211ENST00000557658 RBMY1EA6NEQ0 496 aaKnown RBP8.57□□□□□ -1.04
VIPAS39-211ENST00000557658 RBMY1DP0C7P1 496 aaKnown RBP8.57□□□□□ -1.04
VIPAS39-211ENST00000557658 VPS13CQ709C8 3753 aa8.57□□□□□ -1.04
VIPAS39-211ENST00000557658 CCDC179H3BU77 68 aa8.56□□□□□ -1.04
VIPAS39-211ENST00000557658 CREBBPQ92793 2442 aa8.55□□□□□ -1.04
VIPAS39-211ENST00000557658 SPG11Q96JI7 2443 aa8.55□□□□□ -1.04
VIPAS39-211ENST00000557658 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
VIPAS39-211ENST00000557658 COPS9Q8WXC6 57 aa8.55□□□□□ -1.04
VIPAS39-211ENST00000557658 LINC01587Q99440 93 aa8.55□□□□□ -1.04
VIPAS39-211ENST00000557658 CITED2Q99967 270 aaPredicted RBP8.55□□□□□ -1.04
VIPAS39-211ENST00000557658 HERVK_113P63121 156 aa8.55□□□□□ -1.04
VIPAS39-211ENST00000557658 BEAN1Q3B7T3 259 aa8.54□□□□□ -1.04
VIPAS39-211ENST00000557658 C11orf72Q8NBR9 251 aa8.54□□□□□ -1.04
VIPAS39-211ENST00000557658 Q9H8V8 135 aa8.54□□□□□ -1.04
VIPAS39-211ENST00000557658 IGLV5-39A0A0G2JS06 123 aa8.54□□□□□ -1.04
VIPAS39-211ENST00000557658 RS1O15537 224 aa8.54□□□□□ -1.04
VIPAS39-211ENST00000557658 SLURP1P55000 103 aa8.54□□□□□ -1.04
VIPAS39-211ENST00000557658 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.54□□□□□ -1.04
VIPAS39-211ENST00000557658 LINC01356Q8N9X3 169 aa8.54□□□□□ -1.04
VIPAS39-211ENST00000557658 PRORYQ9H606 182 aa8.54□□□□□ -1.04
VIPAS39-211ENST00000557658 VPREB3Q9UKI3 123 aa8.54□□□□□ -1.04
VIPAS39-211ENST00000557658 COX7A2LO14548 114 aa8.53□□□□□ -1.04
VIPAS39-211ENST00000557658 DSCR9P59020 149 aa8.53□□□□□ -1.04
VIPAS39-211ENST00000557658 COX6A2Q02221 97 aa8.53□□□□□ -1.04
VIPAS39-211ENST00000557658 IGHV3OR16-12A0A075B7B8 117 aa8.53□□□□□ -1.04
VIPAS39-211ENST00000557658 ZNF702PQ9H963 129 aa8.53□□□□□ -1.04
VIPAS39-211ENST00000557658 COL12A1Q99715 3063 aa8.52□□□□□ -1.05
VIPAS39-211ENST00000557658 TRBV7-7A0A0K0K1E9 115 aa8.52□□□□□ -1.05
VIPAS39-211ENST00000557658 INSP01308 110 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms