RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 SMIM2Q9BVW6 85 aa9.64□□□□□ -0.87
SUPT16H-208ENST00000557652 DNAH1Q9P2D7 4330 aa9.63□□□□□ -0.87
SUPT16H-208ENST00000557652 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
SUPT16H-208ENST00000557652 SMKR1H3BMG3 65 aa9.63□□□□□ -0.87
SUPT16H-208ENST00000557652 AMTP48728 403 aa9.63□□□□□ -0.87
SUPT16H-208ENST00000557652 Q6ZR54 194 aa9.63□□□□□ -0.87
SUPT16H-208ENST00000557652 NIT1Q86X76 327 aa9.63□□□□□ -0.87
SUPT16H-208ENST00000557652 WFDC10BQ8IUB3 73 aa9.63□□□□□ -0.87
SUPT16H-208ENST00000557652 MAP1LC3AQ9H492 121 aa9.63□□□□□ -0.87
SUPT16H-208ENST00000557652 GAS8-AS1O95177 125 aa9.62□□□□□ -0.87
SUPT16H-208ENST00000557652 NPYP01303 97 aa9.62□□□□□ -0.87
SUPT16H-208ENST00000557652 LAGE3Q14657 143 aa9.62□□□□□ -0.87
SUPT16H-208ENST00000557652 NTM-AS1Q6ZSK4 140 aa9.62□□□□□ -0.87
SUPT16H-208ENST00000557652 CBLN2Q8IUK8 224 aa9.62□□□□□ -0.87
SUPT16H-208ENST00000557652 MRPL18Q9H0U6 180 aaKnown RBP9.62□□□□□ -0.87
SUPT16H-208ENST00000557652 NXT2Q9NPJ8 142 aaKnown RBP9.62□□□□□ -0.87
SUPT16H-208ENST00000557652 TRAPPC1Q9Y5R8 145 aa9.62□□□□□ -0.87
SUPT16H-208ENST00000557652 DNAH6Q9C0G6 4158 aa9.62□□□□□ -0.87
SUPT16H-208ENST00000557652 A0A087WX48 190 aa9.61□□□□□ -0.87
SUPT16H-208ENST00000557652 A0A1B0GUV1 79 aa9.61□□□□□ -0.87
SUPT16H-208ENST00000557652 FCER1GP30273 86 aa9.61□□□□□ -0.87
SUPT16H-208ENST00000557652 FABP9Q0Z7S8 132 aa9.61□□□□□ -0.87
SUPT16H-208ENST00000557652 TMEM18Q96B42 140 aa9.61□□□□□ -0.87
SUPT16H-208ENST00000557652 CHCHD5Q9BSY4 110 aa9.61□□□□□ -0.87
SUPT16H-208ENST00000557652 UBE2L6O14933 153 aa9.6□□□□□ -0.87
SUPT16H-208ENST00000557652 ATP6V1G1O75348 118 aa9.6□□□□□ -0.87
SUPT16H-208ENST00000557652 TSHBP01222 138 aa9.6□□□□□ -0.87
SUPT16H-208ENST00000557652 ESDP10768 282 aa9.6□□□□□ -0.87
SUPT16H-208ENST00000557652 ZNF25P17030 456 aaPredicted RBP9.6□□□□□ -0.87
SUPT16H-208ENST00000557652 G0S2P27469 103 aa9.6□□□□□ -0.87
SUPT16H-208ENST00000557652 RAB5AP20339 215 aa9.59□□□□□ -0.87
SUPT16H-208ENST00000557652 NFE4Q86UQ8 179 aa9.59□□□□□ -0.87
SUPT16H-208ENST00000557652 Q8N8P6 123 aa9.59□□□□□ -0.87
SUPT16H-208ENST00000557652 ALKBH7Q9BT30 221 aaPredicted RBP9.59□□□□□ -0.87
SUPT16H-208ENST00000557652 LINC01549A6NIU2 74 aa9.58□□□□□ -0.88
SUPT16H-208ENST00000557652 TMEM262E9PQX1 116 aa9.58□□□□□ -0.88
SUPT16H-208ENST00000557652 IGLV2-18A0A075B6J9 118 aa9.57□□□□□ -0.88
SUPT16H-208ENST00000557652 TRAV8-3A0A0A6YYJ7 113 aa9.57□□□□□ -0.88
SUPT16H-208ENST00000557652 IBA57-AS1B1ANH7 110 aa9.57□□□□□ -0.88
SUPT16H-208ENST00000557652 Q0VG73 95 aa9.57□□□□□ -0.88
SUPT16H-208ENST00000557652 KIAA1644Q3SXP7 199 aa9.57□□□□□ -0.88
SUPT16H-208ENST00000557652 ORMDL2Q53FV1 153 aa9.57□□□□□ -0.88
SUPT16H-208ENST00000557652 MRPL52Q86TS9 123 aaKnown RBP9.57□□□□□ -0.88
SUPT16H-208ENST00000557652 CSDC2Q9Y534 153 aaKnown RBP9.57□□□□□ -0.88
SUPT16H-208ENST00000557652 KMT2CQ8NEZ4 4911 aaKnown RBP9.56□□□□□ -0.88
SUPT16H-208ENST00000557652 KMT2AQ03164 3969 aa9.56□□□□□ -0.88
SUPT16H-208ENST00000557652 COLCA2A8K830 154 aa9.56□□□□□ -0.88
SUPT16H-208ENST00000557652 TIMM21Q9BVV7 248 aa9.56□□□□□ -0.88
SUPT16H-208ENST00000557652 COX11Q9Y6N1 276 aa9.56□□□□□ -0.88
SUPT16H-208ENST00000557652 SACSQ9NZJ4 4579 aa9.55□□□□□ -0.88
SUPT16H-208ENST00000557652 RAB5BP61020 215 aa9.55□□□□□ -0.88
SUPT16H-208ENST00000557652 RBX1P62877 108 aa9.55□□□□□ -0.88
SUPT16H-208ENST00000557652 C1orf134Q5TEV5 83 aa9.55□□□□□ -0.88
SUPT16H-208ENST00000557652 AMMECR1LQ6DCA0 310 aa9.55□□□□□ -0.88
SUPT16H-208ENST00000557652 C6orf223Q8N319 242 aa9.55□□□□□ -0.88
SUPT16H-208ENST00000557652 C20orf203Q8NBC4 194 aa9.55□□□□□ -0.88
SUPT16H-208ENST00000557652 RMI2Q96E14 147 aa9.55□□□□□ -0.88
SUPT16H-208ENST00000557652 LINC01546A6NGU7 62 aa9.54□□□□□ -0.88
SUPT16H-208ENST00000557652 IGHV3-30P01768 117 aa9.54□□□□□ -0.88
SUPT16H-208ENST00000557652 IGHV3-33P01772 117 aa9.54□□□□□ -0.88
SUPT16H-208ENST00000557652 NPSP0C0P6 89 aa9.54□□□□□ -0.88
SUPT16H-208ENST00000557652 IGHV3-30-3P0DP02 117 aa9.54□□□□□ -0.88
SUPT16H-208ENST00000557652 IGHV3-30-5P0DP03 117 aa9.54□□□□□ -0.88
SUPT16H-208ENST00000557652 GAGE6Q13070 117 aa9.54□□□□□ -0.88
SUPT16H-208ENST00000557652 MPV17L2Q567V2 206 aa9.54□□□□□ -0.88
SUPT16H-208ENST00000557652 PRSS3P2Q8NHM4 247 aa9.54□□□□□ -0.88
SUPT16H-208ENST00000557652 TMEM101Q96IK0 257 aa9.54□□□□□ -0.88
SUPT16H-208ENST00000557652 LOC389332A0A1B0GUA5 103 aa9.53□□□□□ -0.88
SUPT16H-208ENST00000557652 CRPP02741 224 aa9.53□□□□□ -0.88
SUPT16H-208ENST00000557652 FGF6P10767 208 aa9.53□□□□□ -0.88
SUPT16H-208ENST00000557652 MIAQ16674 131 aa9.53□□□□□ -0.88
SUPT16H-208ENST00000557652 LINC00336Q6ZUF6 198 aa9.53□□□□□ -0.88
SUPT16H-208ENST00000557652 TM2D2Q9BX73 214 aa9.53□□□□□ -0.88
SUPT16H-208ENST00000557652 KRTAP1-5Q9BYS1 174 aa9.53□□□□□ -0.88
SUPT16H-208ENST00000557652 SPANXA1Q9NS26 97 aa9.53□□□□□ -0.88
SUPT16H-208ENST00000557652 PRR34Q9NV39 138 aa9.53□□□□□ -0.88
SUPT16H-208ENST00000557652 M0R2N4 97 aa9.52□□□□□ -0.89
SUPT16H-208ENST00000557652 ANGP03950 147 aaKnown RBP9.52□□□□□ -0.89
SUPT16H-208ENST00000557652 IFI27P40305 119 aaPredicted RBP9.52□□□□□ -0.89
SUPT16H-208ENST00000557652 DGAT2L7PQ6IED9 249 aa9.52□□□□□ -0.89
SUPT16H-208ENST00000557652 OR5A1Q8NGJ0 315 aa9.52□□□□□ -0.89
SUPT16H-208ENST00000557652 C18orf32Q8TCD1 76 aa9.52□□□□□ -0.89
SUPT16H-208ENST00000557652 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.51□□□□□ -0.89
SUPT16H-208ENST00000557652 TRAV8-4A0A0B4J246 113 aa9.51□□□□□ -0.89
SUPT16H-208ENST00000557652 IGKV2-29A2NJV5 120 aaPredicted RBP9.51□□□□□ -0.89
SUPT16H-208ENST00000557652 CCL25O15444 150 aa9.51□□□□□ -0.89
SUPT16H-208ENST00000557652 RNASEKQ6P5S7 137 aaKnown RBP9.51□□□□□ -0.89
SUPT16H-208ENST00000557652 FA2HQ7L5A8 372 aa9.51□□□□□ -0.89
SUPT16H-208ENST00000557652 AP5S1Q9NUS5 200 aa9.51□□□□□ -0.89
SUPT16H-208ENST00000557652 KLK12Q9UKR0 248 aa9.51□□□□□ -0.89
SUPT16H-208ENST00000557652 CYSLTR1Q9Y271 337 aa9.51□□□□□ -0.89
SUPT16H-208ENST00000557652 PYGO1Q9Y3Y4 419 aa9.51□□□□□ -0.89
SUPT16H-208ENST00000557652 TRGC2P03986 189 aa9.5□□□□□ -0.89
SUPT16H-208ENST00000557652 Q8N976 141 aa9.5□□□□□ -0.89
SUPT16H-208ENST00000557652 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
SUPT16H-208ENST00000557652 SCO1O75880 301 aa9.49□□□□□ -0.89
SUPT16H-208ENST00000557652 MRPS36P82909 103 aaKnown RBP9.49□□□□□ -0.89
SUPT16H-208ENST00000557652 PAPPA-AS1Q5QFB9 102 aa9.49□□□□□ -0.89
SUPT16H-208ENST00000557652 UBE2WQ96B02 151 aa9.49□□□□□ -0.89
SUPT16H-208ENST00000557652 IGLV4-60A0A075B6I1 120 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms