RNA–Protein interactions for RNA: ENST00000557478.5

NEDD1-212, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-212ENST00000557478 ZNF727A8MUV8 499 aa11.48□□□□□ -0.57
NEDD1-212ENST00000557478 AMTP48728 403 aa11.48□□□□□ -0.57
NEDD1-212ENST00000557478 REG3AQ06141 175 aa11.48□□□□□ -0.57
NEDD1-212ENST00000557478 GTSF1Q8WW33 167 aa11.48□□□□□ -0.57
NEDD1-212ENST00000557478 PLA2G1BP04054 148 aaKnown RBP11.47□□□□□ -0.57
NEDD1-212ENST00000557478 LINC01551Q86U37 167 aa11.47□□□□□ -0.57
NEDD1-212ENST00000557478 TSKUQ8WUA8 353 aa11.47□□□□□ -0.57
NEDD1-212ENST00000557478 SMDT1Q9H4I9 107 aa11.47□□□□□ -0.57
NEDD1-212ENST00000557478 OSTCQ9NRP0 149 aa11.47□□□□□ -0.57
NEDD1-212ENST00000557478 HLA-DQA1P01909 254 aa11.46□□□□□ -0.57
NEDD1-212ENST00000557478 GATD1Q8NB37 220 aa11.46□□□□□ -0.57
NEDD1-212ENST00000557478 A0A1B0GUT8 65 aa11.45□□□□□ -0.58
NEDD1-212ENST00000557478 USP17L23D6RBM5 183 aa11.45□□□□□ -0.58
NEDD1-212ENST00000557478 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
NEDD1-212ENST00000557478 FAM30AQ9NZY2 134 aa11.45□□□□□ -0.58
NEDD1-212ENST00000557478 PPP1R17O96001 155 aa11.44□□□□□ -0.58
NEDD1-212ENST00000557478 CHAC1Q9BUX1 264 aa11.44□□□□□ -0.58
NEDD1-212ENST00000557478 TRBV6-5A0A0K0K1A5 114 aa11.43□□□□□ -0.58
NEDD1-212ENST00000557478 HIGD1CA8MV81 97 aa11.43□□□□□ -0.58
NEDD1-212ENST00000557478 TMEM241Q24JQ0 296 aa11.43□□□□□ -0.58
NEDD1-212ENST00000557478 C20orf203Q8NBC4 194 aa11.43□□□□□ -0.58
NEDD1-212ENST00000557478 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
NEDD1-212ENST00000557478 VPS13BQ7Z7G8 4022 aa11.43□□□□□ -0.58
NEDD1-212ENST00000557478 SRRM2Q9UQ35 2752 aaKnown RBP11.43□□□□□ -0.58
NEDD1-212ENST00000557478 I3L3M4 83 aa11.42□□□□□ -0.58
NEDD1-212ENST00000557478 APCSP02743 223 aa11.42□□□□□ -0.58
NEDD1-212ENST00000557478 SRP19P09132 144 aaKnown RBP11.42□□□□□ -0.58
NEDD1-212ENST00000557478 ZNF25P17030 456 aaPredicted RBP11.42□□□□□ -0.58
NEDD1-212ENST00000557478 RIGQ13278 110 aa11.42□□□□□ -0.58
NEDD1-212ENST00000557478 PEA15Q15121 130 aa11.42□□□□□ -0.58
NEDD1-212ENST00000557478 AMMECR1LQ6DCA0 310 aa11.42□□□□□ -0.58
NEDD1-212ENST00000557478 CFAP161Q6P656 301 aa11.42□□□□□ -0.58
NEDD1-212ENST00000557478 MRAP2Q96G30 205 aa11.42□□□□□ -0.58
NEDD1-212ENST00000557478 SDHAF1A6NFY7 115 aa11.41□□□□□ -0.58
NEDD1-212ENST00000557478 AP5S1Q9NUS5 200 aa11.41□□□□□ -0.58
NEDD1-212ENST00000557478 FAT1Q14517 4588 aa11.4□□□□□ -0.58
NEDD1-212ENST00000557478 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.4□□□□□ -0.58
NEDD1-212ENST00000557478 TRAV26-2A0A0B4J265 109 aa11.4□□□□□ -0.58
NEDD1-212ENST00000557478 PMCHP20382 165 aa11.4□□□□□ -0.58
NEDD1-212ENST00000557478 SMAGPQ0VAQ4 97 aa11.4□□□□□ -0.58
NEDD1-212ENST00000557478 CLPSL2Q6UWE3 100 aa11.4□□□□□ -0.58
NEDD1-212ENST00000557478 ST20Q9HBF5 79 aa11.4□□□□□ -0.58
NEDD1-212ENST00000557478 IGLV4-60A0A075B6I1 120 aa11.39□□□□□ -0.59
NEDD1-212ENST00000557478 A0A1B0GW15 77 aa11.39□□□□□ -0.59
NEDD1-212ENST00000557478 KRTAP26-1Q6PEX3 210 aa11.39□□□□□ -0.59
NEDD1-212ENST00000557478 C9orf163Q8N9P6 203 aa11.39□□□□□ -0.59
NEDD1-212ENST00000557478 TMEM101Q96IK0 257 aa11.39□□□□□ -0.59
NEDD1-212ENST00000557478 BTF3L4Q96K17 158 aa11.39□□□□□ -0.59
NEDD1-212ENST00000557478 NAT8BQ9UHF3 227 aa11.39□□□□□ -0.59
NEDD1-212ENST00000557478 PRSS1P07477 247 aa11.38□□□□□ -0.59
NEDD1-212ENST00000557478 CNBPP62633 177 aaKnown RBP11.38□□□□□ -0.59
NEDD1-212ENST00000557478 SCXQ7RTU7 201 aa11.38□□□□□ -0.59
NEDD1-212ENST00000557478 LINC00528Q8N1L1 170 aa11.38□□□□□ -0.59
NEDD1-212ENST00000557478 NAT8Q9UHE5 227 aa11.38□□□□□ -0.59
NEDD1-212ENST00000557478 HAMPP81172 84 aa11.37□□□□□ -0.59
NEDD1-212ENST00000557478 ISOC2Q96AB3 205 aa11.37□□□□□ -0.59
NEDD1-212ENST00000557478 RPL39LQ96EH5 51 aaKnown RBP11.37□□□□□ -0.59
NEDD1-212ENST00000557478 V9GYV3 84 aa11.37□□□□□ -0.59
NEDD1-212ENST00000557478 IGLV10-54A0A075B6I4 117 aa11.36□□□□□ -0.59
NEDD1-212ENST00000557478 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
NEDD1-212ENST00000557478 hDV102S1A0JD36 115 aa11.36□□□□□ -0.59
NEDD1-212ENST00000557478 RNASEKQ6P5S7 137 aaKnown RBP11.36□□□□□ -0.59
NEDD1-212ENST00000557478 DEFB104AQ8WTQ1 72 aa11.36□□□□□ -0.59
NEDD1-212ENST00000557478 DNAH8Q96JB1 4490 aa11.36□□□□□ -0.59
NEDD1-212ENST00000557478 A0A1B0GVG6 124 aa11.35□□□□□ -0.59
NEDD1-212ENST00000557478 PPP1R2P9O14990 202 aa11.35□□□□□ -0.59
NEDD1-212ENST00000557478 S100A8P05109 93 aa11.35□□□□□ -0.59
NEDD1-212ENST00000557478 FGF6P10767 208 aa11.35□□□□□ -0.59
NEDD1-212ENST00000557478 RAB4AP20338 218 aa11.35□□□□□ -0.59
NEDD1-212ENST00000557478 LINC01620Q4KN68 170 aa11.35□□□□□ -0.59
NEDD1-212ENST00000557478 VCYO14598 125 aa11.34□□□□□ -0.59
NEDD1-212ENST00000557478 TCAPO15273 167 aa11.34□□□□□ -0.59
NEDD1-212ENST00000557478 RPL23P62829 140 aaKnown RBP11.34□□□□□ -0.59
NEDD1-212ENST00000557478 ADIRFQ15847 76 aa11.34□□□□□ -0.59
NEDD1-212ENST00000557478 NUP35Q8NFH5 326 aa11.34□□□□□ -0.59
NEDD1-212ENST00000557478 CIRBP-AS1Q8TBR5 109 aa11.34□□□□□ -0.59
NEDD1-212ENST00000557478 IGHV3-64A0A075B6Q5 118 aa11.33□□□□□ -0.6
NEDD1-212ENST00000557478 LINC00862A6NCI5 91 aa11.33□□□□□ -0.6
NEDD1-212ENST00000557478 OR5A1Q8NGJ0 315 aa11.33□□□□□ -0.6
NEDD1-212ENST00000557478 KIR2DL4Q99706 377 aa11.33□□□□□ -0.6
NEDD1-212ENST00000557478 PKIGQ9Y2B9 76 aa11.33□□□□□ -0.6
NEDD1-212ENST00000557478 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
NEDD1-212ENST00000557478 SMIM27A0A1W2PRY6 76 aa11.32□□□□□ -0.6
NEDD1-212ENST00000557478 ESDP10768 282 aa11.32□□□□□ -0.6
NEDD1-212ENST00000557478 POLR2KP53803 58 aaKnown RBP11.32□□□□□ -0.6
NEDD1-212ENST00000557478 MRPL52Q86TS9 123 aaKnown RBP11.32□□□□□ -0.6
NEDD1-212ENST00000557478 RNF185Q96GF1 192 aa11.32□□□□□ -0.6
NEDD1-212ENST00000557478 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.31□□□□□ -0.6
NEDD1-212ENST00000557478 IGKV2-29A2NJV5 120 aaPredicted RBP11.31□□□□□ -0.6
NEDD1-212ENST00000557478 F8W036 122 aa11.31□□□□□ -0.6
NEDD1-212ENST00000557478 CCL25O15444 150 aa11.31□□□□□ -0.6
NEDD1-212ENST00000557478 FCER1GP30273 86 aa11.31□□□□□ -0.6
NEDD1-212ENST00000557478 AMN1Q8IY45 258 aa11.31□□□□□ -0.6
NEDD1-212ENST00000557478 TMEM18Q96B42 140 aa11.31□□□□□ -0.6
NEDD1-212ENST00000557478 C7orf77A4D0Y5 90 aa11.3□□□□□ -0.6
NEDD1-212ENST00000557478 GAGE12HA6NDE8 117 aa11.3□□□□□ -0.6
NEDD1-212ENST00000557478 SDIM1Q6ZPB5 146 aa11.3□□□□□ -0.6
NEDD1-212ENST00000557478 CHCHD10Q8WYQ3 142 aaPredicted RBP11.3□□□□□ -0.6
NEDD1-212ENST00000557478 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
NEDD1-212ENST00000557478 CSDC2Q9Y534 153 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms