RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 M0QY20 66 aa9.29□□□□□ -0.92
VPS33B-206ENST00000557358 CRPP02741 224 aa9.29□□□□□ -0.92
VPS33B-206ENST00000557358 CAMPP49913 170 aa9.29□□□□□ -0.92
VPS33B-206ENST00000557358 FRZBQ92765 325 aa9.29□□□□□ -0.92
VPS33B-206ENST00000557358 NIT2Q9NQR4 276 aa9.29□□□□□ -0.92
VPS33B-206ENST00000557358 PKHD1P08F94 4074 aa9.28□□□□□ -0.92
VPS33B-206ENST00000557358 IGHV1-24A0A0C4DH33 117 aa9.28□□□□□ -0.92
VPS33B-206ENST00000557358 KLK12Q9UKR0 248 aa9.28□□□□□ -0.92
VPS33B-206ENST00000557358 COX19Q49B96 90 aa9.27□□□□□ -0.93
VPS33B-206ENST00000557358 GATD1Q8NB37 220 aa9.27□□□□□ -0.93
VPS33B-206ENST00000557358 UBE2WQ96B02 151 aa9.27□□□□□ -0.93
VPS33B-206ENST00000557358 TMEM191AQ9H0A3 160 aa9.27□□□□□ -0.93
VPS33B-206ENST00000557358 IGKV2D-24A0A075B6R9 120 aa9.26□□□□□ -0.93
VPS33B-206ENST00000557358 UBE2L6O14933 153 aa9.26□□□□□ -0.93
VPS33B-206ENST00000557358 ANGP03950 147 aaKnown RBP9.26□□□□□ -0.93
VPS33B-206ENST00000557358 KRTAP10-2P60368 255 aa9.26□□□□□ -0.93
VPS33B-206ENST00000557358 COTL1Q14019 142 aa9.26□□□□□ -0.93
VPS33B-206ENST00000557358 COLCA2A8K830 154 aa9.25□□□□□ -0.93
VPS33B-206ENST00000557358 CDK2AP2O75956 126 aa9.25□□□□□ -0.93
VPS33B-206ENST00000557358 HLA-DQA1P01909 254 aa9.25□□□□□ -0.93
VPS33B-206ENST00000557358 NTN5Q8WTR8 489 aaPredicted RBP9.25□□□□□ -0.93
VPS33B-206ENST00000557358 TMEM243Q9BU79 118 aa9.25□□□□□ -0.93
VPS33B-206ENST00000557358 GNB1LQ9BYB4 327 aa9.25□□□□□ -0.93
VPS33B-206ENST00000557358 PKD1P98161 4303 aa9.24□□□□□ -0.93
VPS33B-206ENST00000557358 MT-ND6P03923 174 aa9.24□□□□□ -0.93
VPS33B-206ENST00000557358 IQCJQ1A5X6 159 aa9.24□□□□□ -0.93
VPS33B-206ENST00000557358 TMEM136Q6ZRR5 245 aa9.24□□□□□ -0.93
VPS33B-206ENST00000557358 Q8N3U1 123 aa9.24□□□□□ -0.93
VPS33B-206ENST00000557358 C1orf43Q9BWL3 253 aa9.24□□□□□ -0.93
VPS33B-206ENST00000557358 IGLV5-52A0A0A0MRZ9 124 aa9.23□□□□□ -0.93
VPS33B-206ENST00000557358 GAGE6Q13070 117 aa9.23□□□□□ -0.93
VPS33B-206ENST00000557358 FAM104BQ5XKR9 115 aa9.23□□□□□ -0.93
VPS33B-206ENST00000557358 AMN1Q8IY45 258 aa9.23□□□□□ -0.93
VPS33B-206ENST00000557358 DNAH11Q96DT5 4516 aa9.22□□□□□ -0.93
VPS33B-206ENST00000557358 RAB5AP20339 215 aa9.22□□□□□ -0.93
VPS33B-206ENST00000557358 AMTP48728 403 aa9.22□□□□□ -0.93
VPS33B-206ENST00000557358 MIAQ16674 131 aa9.22□□□□□ -0.93
VPS33B-206ENST00000557358 MPV17L2Q567V2 206 aa9.22□□□□□ -0.93
VPS33B-206ENST00000557358 Q8N814 137 aa9.22□□□□□ -0.93
VPS33B-206ENST00000557358 TRAV26-2A0A0B4J265 109 aa9.21□□□□□ -0.94
VPS33B-206ENST00000557358 LRCOL1A6NCL2 159 aa9.21□□□□□ -0.94
VPS33B-206ENST00000557358 NCR2O95944 276 aa9.21□□□□□ -0.94
VPS33B-206ENST00000557358 PPP1R17O96001 155 aa9.21□□□□□ -0.94
VPS33B-206ENST00000557358 RAB4AP20338 218 aa9.21□□□□□ -0.94
VPS33B-206ENST00000557358 GCSHP23434 173 aa9.21□□□□□ -0.94
VPS33B-206ENST00000557358 RPS10P46783 165 aaKnown RBP9.21□□□□□ -0.94
VPS33B-206ENST00000557358 C14orf177Q52M58 125 aa9.21□□□□□ -0.94
VPS33B-206ENST00000557358 NTM-AS1Q6ZSK4 140 aa9.21□□□□□ -0.94
VPS33B-206ENST00000557358 Q8N976 141 aa9.21□□□□□ -0.94
VPS33B-206ENST00000557358 RNF185Q96GF1 192 aa9.21□□□□□ -0.94
VPS33B-206ENST00000557358 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.94
VPS33B-206ENST00000557358 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.94
VPS33B-206ENST00000557358 APCSP02743 223 aa9.2□□□□□ -0.94
VPS33B-206ENST00000557358 RBX1P62877 108 aa9.2□□□□□ -0.94
VPS33B-206ENST00000557358 MRPL51Q4U2R6 128 aaKnown RBP9.2□□□□□ -0.94
VPS33B-206ENST00000557358 MRAP2Q96G30 205 aa9.2□□□□□ -0.94
VPS33B-206ENST00000557358 ST20Q9HBF5 79 aa9.2□□□□□ -0.94
VPS33B-206ENST00000557358 PMCHP20382 165 aa9.19□□□□□ -0.94
VPS33B-206ENST00000557358 AMMECR1LQ6DCA0 310 aa9.19□□□□□ -0.94
VPS33B-206ENST00000557358 DYNC1H1Q14204 4646 aaKnown RBP9.19□□□□□ -0.94
VPS33B-206ENST00000557358 A0A1B0GUV1 79 aa9.18□□□□□ -0.94
VPS33B-206ENST00000557358 SDHAF1A6NFY7 115 aa9.18□□□□□ -0.94
VPS33B-206ENST00000557358 I3L3M4 83 aa9.18□□□□□ -0.94
VPS33B-206ENST00000557358 FABP9Q0Z7S8 132 aa9.18□□□□□ -0.94
VPS33B-206ENST00000557358 LINC00269Q8N2A0 174 aa9.18□□□□□ -0.94
VPS33B-206ENST00000557358 BAALCQ8WXS3 180 aa9.18□□□□□ -0.94
VPS33B-206ENST00000557358 D6R8Y8 96 aa9.17□□□□□ -0.94
VPS33B-206ENST00000557358 PPBPP02775 128 aa9.17□□□□□ -0.94
VPS33B-206ENST00000557358 CKS2P33552 79 aa9.17□□□□□ -0.94
VPS33B-206ENST00000557358 RPL39LQ96EH5 51 aaKnown RBP9.17□□□□□ -0.94
VPS33B-206ENST00000557358 KIAA1109Q2LD37 5005 aa9.16□□□□□ -0.94
VPS33B-206ENST00000557358 TRAV8-4A0A0B4J246 113 aa9.16□□□□□ -0.94
VPS33B-206ENST00000557358 SMKR1H3BMG3 65 aa9.16□□□□□ -0.94
VPS33B-206ENST00000557358 H7C423 109 aa9.16□□□□□ -0.94
VPS33B-206ENST00000557358 LECT2O14960 151 aa9.16□□□□□ -0.94
VPS33B-206ENST00000557358 TRGC2P03986 189 aa9.16□□□□□ -0.94
VPS33B-206ENST00000557358 FUSP35637 526 aaKnown RBP eCLIP9.16□□□□□ -0.94
VPS33B-206ENST00000557358 REG3AQ06141 175 aa9.16□□□□□ -0.94
VPS33B-206ENST00000557358 KIAA1644Q3SXP7 199 aa9.16□□□□□ -0.94
VPS33B-206ENST00000557358 ENHOQ6UWT2 76 aa9.16□□□□□ -0.94
VPS33B-206ENST00000557358 ORMDL3Q8N138 153 aa9.16□□□□□ -0.94
VPS33B-206ENST00000557358 MAPKAPK5-AS1Q8N8E1 139 aa9.16□□□□□ -0.94
VPS33B-206ENST00000557358 TRBV6-5A0A0K0K1A5 114 aa9.15□□□□□ -0.94
VPS33B-206ENST00000557358 SMAGPQ0VAQ4 97 aa9.15□□□□□ -0.94
VPS33B-206ENST00000557358 RNASEKQ6P5S7 137 aaKnown RBP9.15□□□□□ -0.94
VPS33B-206ENST00000557358 CLPSL2Q6UWE3 100 aa9.15□□□□□ -0.94
VPS33B-206ENST00000557358 TMEM101Q96IK0 257 aa9.15□□□□□ -0.94
VPS33B-206ENST00000557358 PRELID3AQ96N28 172 aa9.15□□□□□ -0.94
VPS33B-206ENST00000557358 PRR34Q9NV39 138 aa9.15□□□□□ -0.94
VPS33B-206ENST00000557358 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.14□□□□□ -0.95
VPS33B-206ENST00000557358 DEFB104AQ8WTQ1 72 aa9.14□□□□□ -0.95
VPS33B-206ENST00000557358 VCYO14598 125 aa9.13□□□□□ -0.95
VPS33B-206ENST00000557358 GAS8-AS1O95177 125 aa9.13□□□□□ -0.95
VPS33B-206ENST00000557358 TNFRSF6BO95407 300 aa9.13□□□□□ -0.95
VPS33B-206ENST00000557358 NPYP01303 97 aa9.13□□□□□ -0.95
VPS33B-206ENST00000557358 FCER1GP30273 86 aa9.13□□□□□ -0.95
VPS33B-206ENST00000557358 NRACQ8N912 160 aa9.13□□□□□ -0.95
VPS33B-206ENST00000557358 KIR2DL4Q99706 377 aa9.13□□□□□ -0.95
VPS33B-206ENST00000557358 ALKBH7Q9BT30 221 aaPredicted RBP9.13□□□□□ -0.95
VPS33B-206ENST00000557358 TMEM70Q9BUB7 260 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms