RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, human

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSEN1-222	ENST00000557356	UBE2L6	O14933	153 aa		5.27	□□□□□ -1.57
PSEN1-222	ENST00000557356	CRP	P02741	224 aa		5.27	□□□□□ -1.57
PSEN1-222	ENST00000557356	ANG	P03950	147 aa	Known RBP	5.27	□□□□□ -1.57
PSEN1-222	ENST00000557356	S100A6	P06703	90 aa		5.27	□□□□□ -1.57
PSEN1-222	ENST00000557356	SMIM6	P0DI80	62 aa		5.27	□□□□□ -1.57
PSEN1-222	ENST00000557356	GATD1	Q8NB37	220 aa		5.27	□□□□□ -1.57
PSEN1-222	ENST00000557356	TRBV6-5	A0A0K0K1A5	114 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	PMCH	P20382	165 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	LOR	P23490	312 aa	Predicted RBP	5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	AMT	P48728	403 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	SMAGP	Q0VAQ4	97 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	MIA	Q16674	131 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	NTM-AS1	Q6ZSK4	140 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356		Q8N976	141 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	NUP35	Q8NFH5	326 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	UBE2W	Q96B02	151 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	ANAPC16	Q96DE5	110 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	YPEL4	Q96NS1	127 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	C1orf43	Q9BWL3	253 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	CTDSP1	Q9GZU7	261 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	ST20	Q9HBF5	79 aa		5.26	□□□□□ -1.57
PSEN1-222	ENST00000557356	IGKV2D-24	A0A075B6R9	120 aa		5.25	□□□□□ -1.57
PSEN1-222	ENST00000557356	TRAV8-4	A0A0B4J246	113 aa		5.25	□□□□□ -1.57
PSEN1-222	ENST00000557356		I3L3M4	83 aa		5.25	□□□□□ -1.57
PSEN1-222	ENST00000557356	VCY	O14598	125 aa		5.25	□□□□□ -1.57
PSEN1-222	ENST00000557356	TCAP	O15273	167 aa		5.25	□□□□□ -1.57
PSEN1-222	ENST00000557356	CDK2AP2	O75956	126 aa		5.25	□□□□□ -1.57
PSEN1-222	ENST00000557356	C14orf177	Q52M58	125 aa		5.25	□□□□□ -1.57
PSEN1-222	ENST00000557356	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.25	□□□□□ -1.57
PSEN1-222	ENST00000557356	ALMS1	Q8TCU4	4167 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	LYST	Q99698	3801 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	LRCOL1	A6NCL2	159 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	SDHAF1	A6NFY7	115 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	PPBP	P02775	128 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	RAB4A	P20338	218 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	AKR1D1	P51857	326 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	RBX1	P62877	108 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	HBB	P68871	147 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	GAGE6	Q13070	117 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	MPV17L2	Q567V2	206 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	FAM104B	Q5XKR9	115 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	AMMECR1L	Q6DCA0	310 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	ATP5L2	Q7Z4Y8	100 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	BTF3L4	Q96K17	158 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	C12orf57	Q99622	126 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	PRR34	Q9NV39	138 aa		5.24	□□□□□ -1.57
PSEN1-222	ENST00000557356	TRAV26-2	A0A0B4J265	109 aa		5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356	TRBV27	A0A0K0K1C4	114 aa		5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356	APCS	P02743	223 aa		5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356	ZNF25	P17030	456 aa	Predicted RBP	5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356	GCSH	P23434	173 aa		5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356	AMN1	Q8IY45	258 aa		5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356		Q8N814	137 aa		5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356	TMEM18	Q96B42	140 aa		5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356	TMEM101	Q96IK0	257 aa		5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356	KIR2DL4	Q99706	377 aa		5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356	C20orf78	Q9BR46	151 aa		5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356	RYR3	Q15413	4870 aa		5.23	□□□□□ -1.57
PSEN1-222	ENST00000557356	RYR2	Q92736	4967 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	TRBV24-1	A0A075B6N3	115 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	IGLV5-52	A0A0A0MRZ9	124 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	PHOX2A	O14813	284 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	FCER1G	P30273	86 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	CKS2	P33552	79 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	CAMP	P49913	170 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	POLR2K	P53803	58 aa	Known RBP	5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	KRTAP10-2	P60368	255 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	SUMO2	P61956	95 aa	Known RBP	5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	SNRPE	P62304	92 aa	Known RBP	5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	REG3A	Q06141	175 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	ENHO	Q6UWT2	76 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	LINC00269	Q8N2A0	174 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356		Q8N3U1	123 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	RPL39L	Q96EH5	51 aa	Known RBP	5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	RNF185	Q96GF1	192 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	IMMP2L	Q96T52	175 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	TMEM70	Q9BUB7	260 aa		5.22	□□□□□ -1.57
PSEN1-222	ENST00000557356	S100P	P25815	95 aa		5.21	□□□□□ -1.58
PSEN1-222	ENST00000557356	RPS10	P46783	165 aa	Known RBP	5.21	□□□□□ -1.58
PSEN1-222	ENST00000557356	RPL32	P62910	135 aa	Known RBP	5.21	□□□□□ -1.58
PSEN1-222	ENST00000557356	FABP9	Q0Z7S8	132 aa		5.21	□□□□□ -1.58
PSEN1-222	ENST00000557356	DGAT2L7P	Q6IED9	249 aa		5.21	□□□□□ -1.58
PSEN1-222	ENST00000557356	BAALC	Q8WXS3	180 aa		5.21	□□□□□ -1.58
PSEN1-222	ENST00000557356	DNAH1	Q9P2D7	4330 aa		5.21	□□□□□ -1.58
PSEN1-222	ENST00000557356	PLEC	Q15149	4684 aa	Known RBP	5.2	□□□□□ -1.58
PSEN1-222	ENST00000557356	TRAV9-1	A0A075B6T8	112 aa		5.2	□□□□□ -1.58
PSEN1-222	ENST00000557356	FGF6	P10767	208 aa		5.2	□□□□□ -1.58
PSEN1-222	ENST00000557356	CTAG1A	P78358	180 aa		5.2	□□□□□ -1.58
PSEN1-222	ENST00000557356	MRPL51	Q4U2R6	128 aa	Known RBP	5.2	□□□□□ -1.58
PSEN1-222	ENST00000557356	MRPL54	Q6P161	138 aa	Known RBP	5.2	□□□□□ -1.58
PSEN1-222	ENST00000557356	RNASEK	Q6P5S7	137 aa	Known RBP	5.2	□□□□□ -1.58
PSEN1-222	ENST00000557356	CFAP161	Q6P656	301 aa		5.2	□□□□□ -1.58
PSEN1-222	ENST00000557356	C20orf203	Q8NBC4	194 aa		5.2	□□□□□ -1.58
PSEN1-222	ENST00000557356	OR5A1	Q8NGJ0	315 aa		5.2	□□□□□ -1.58
PSEN1-222	ENST00000557356	LAMTOR2	Q9Y2Q5	125 aa		5.2	□□□□□ -1.58
PSEN1-222	ENST00000557356	IGLV4-60	A0A075B6I1	120 aa		5.19	□□□□□ -1.58
PSEN1-222	ENST00000557356		A0A1B0GXF2	115 aa		5.19	□□□□□ -1.58
PSEN1-222	ENST00000557356	CCL25	O15444	150 aa		5.19	□□□□□ -1.58
PSEN1-222	ENST00000557356	ESD	P10768	282 aa		5.19	□□□□□ -1.58
PSEN1-222	ENST00000557356	S100A2	P29034	98 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms