RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, humanhuman

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-223ENST00000557320 USP9YO00507 2555 aaPredicted RBP11.18□□□□□ -0.62
PAPOLA-223ENST00000557320 A0A087WWL8 130 aa11.18□□□□□ -0.62
PAPOLA-223ENST00000557320 IGLV1-44P01699 117 aa11.18□□□□□ -0.62
PAPOLA-223ENST00000557320 IGHV1-8P0DP01 117 aa11.18□□□□□ -0.62
PAPOLA-223ENST00000557320 ADAMTSL4-AS1Q5T5F5 129 aa11.18□□□□□ -0.62
PAPOLA-223ENST00000557320 TIMM17AQ99595 171 aa11.18□□□□□ -0.62
PAPOLA-223ENST00000557320 IGHV3-30-3P0DP02 117 aa11.17□□□□□ -0.62
PAPOLA-223ENST00000557320 EDN2P20800 178 aa11.17□□□□□ -0.62
PAPOLA-223ENST00000557320 IGHV4-4A0A075B6R2 117 aa11.17□□□□□ -0.62
PAPOLA-223ENST00000557320 NXPH4O95158 308 aa11.17□□□□□ -0.62
PAPOLA-223ENST00000557320 INAFM2P0DMQ5 153 aa11.17□□□□□ -0.62
PAPOLA-223ENST00000557320 NUP37Q8NFH4 326 aa11.17□□□□□ -0.62
PAPOLA-223ENST00000557320 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
PAPOLA-223ENST00000557320 DCANP1Q8TF63 244 aa11.16□□□□□ -0.62
PAPOLA-223ENST00000557320 USP17L23D6RBM5 183 aa11.15□□□□□ -0.62
PAPOLA-223ENST00000557320 IGF1P05019 195 aa11.15□□□□□ -0.62
PAPOLA-223ENST00000557320 TMEM61Q8N0U2 210 aa11.15□□□□□ -0.62
PAPOLA-223ENST00000557320 C16orf92Q96LL3 132 aa11.15□□□□□ -0.62
PAPOLA-223ENST00000557320 TMEM243Q9BU79 118 aa11.15□□□□□ -0.62
PAPOLA-223ENST00000557320 V9GYY9 64 aa11.15□□□□□ -0.62
PAPOLA-223ENST00000557320 BAHCC1Q9P281 2608 aa11.15□□□□□ -0.62
PAPOLA-223ENST00000557320 FAM236DA0A1B0GTK5 79 aa11.15□□□□□ -0.63
PAPOLA-223ENST00000557320 GNRH2O43555 120 aa11.15□□□□□ -0.63
PAPOLA-223ENST00000557320 FAM236CP0DP71 79 aa11.15□□□□□ -0.63
PAPOLA-223ENST00000557320 HIST2H2BCQ6DN03 193 aa11.14□□□□□ -0.63
PAPOLA-223ENST00000557320 PTPN13Q12923 2485 aa11.13□□□□□ -0.63
PAPOLA-223ENST00000557320 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
PAPOLA-223ENST00000557320 A8MZ25 164 aa11.13□□□□□ -0.63
PAPOLA-223ENST00000557320 GPHB5Q86YW7 130 aa11.13□□□□□ -0.63
PAPOLA-223ENST00000557320 TRAV21A0A0B4J279 112 aa11.13□□□□□ -0.63
PAPOLA-223ENST00000557320 MIAQ16674 131 aa11.13□□□□□ -0.63
PAPOLA-223ENST00000557320 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.13□□□□□ -0.63
PAPOLA-223ENST00000557320 TACC2O95359 2948 aa11.12□□□□□ -0.63
PAPOLA-223ENST00000557320 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.12□□□□□ -0.63
PAPOLA-223ENST00000557320 PRR9Q5T870 116 aa11.12□□□□□ -0.63
PAPOLA-223ENST00000557320 COL12A1Q99715 3063 aa11.12□□□□□ -0.63
PAPOLA-223ENST00000557320 RNF223E7ERA6 249 aa11.12□□□□□ -0.63
PAPOLA-223ENST00000557320 FAM223AQ8IWN6 122 aa11.12□□□□□ -0.63
PAPOLA-223ENST00000557320 CTSGP08311 255 aa11.11□□□□□ -0.63
PAPOLA-223ENST00000557320 RNASE13Q5GAN3 156 aaKnown RBP11.11□□□□□ -0.63
PAPOLA-223ENST00000557320 C20orf197Q8N268 126 aa11.11□□□□□ -0.63
PAPOLA-223ENST00000557320 ZNF625Q96I27 306 aaPredicted RBP11.11□□□□□ -0.63
PAPOLA-223ENST00000557320 FANCD2OSQ96PS1 177 aa11.11□□□□□ -0.63
PAPOLA-223ENST00000557320 HOXD3P31249 432 aaPredicted RBP11.11□□□□□ -0.63
PAPOLA-223ENST00000557320 BRK1Q8WUW1 75 aa11.11□□□□□ -0.63
PAPOLA-223ENST00000557320 Q9HAA7 133 aa11.11□□□□□ -0.63
PAPOLA-223ENST00000557320 IGKV3-7A0A075B6H7 116 aa11.11□□□□□ -0.63
PAPOLA-223ENST00000557320 BUB1B-PAK6H3BSN5 160 aa11.11□□□□□ -0.63
PAPOLA-223ENST00000557320 RPL11P62913 178 aaKnown RBP11.11□□□□□ -0.63
PAPOLA-223ENST00000557320 SUMO4Q6EEV6 95 aa11.1□□□□□ -0.63
PAPOLA-223ENST00000557320 A0A1W2PPR1 153 aa11.1□□□□□ -0.63
PAPOLA-223ENST00000557320 COX7A2LO14548 114 aa11.1□□□□□ -0.63
PAPOLA-223ENST00000557320 NBR2O15453 112 aa11.1□□□□□ -0.63
PAPOLA-223ENST00000557320 BSPH1Q075Z2 132 aa11.1□□□□□ -0.63
PAPOLA-223ENST00000557320 ASH1LQ9NR48 2969 aaKnown RBP11.1□□□□□ -0.63
PAPOLA-223ENST00000557320 UTP20O75691 2785 aaKnown RBP11.1□□□□□ -0.63
PAPOLA-223ENST00000557320 ANKHD1Q8IWZ3 2542 aaKnown RBP11.09□□□□□ -0.63
PAPOLA-223ENST00000557320 IGLV3-9A0A075B6K5 115 aa11.09□□□□□ -0.63
PAPOLA-223ENST00000557320 DEFB1P60022 68 aa11.09□□□□□ -0.63
PAPOLA-223ENST00000557320 FHL2Q14192 279 aa11.09□□□□□ -0.63
PAPOLA-223ENST00000557320 SPTAN1Q13813 2472 aaKnown RBP11.09□□□□□ -0.63
PAPOLA-223ENST00000557320 BUB3O43684 328 aa11.09□□□□□ -0.63
PAPOLA-223ENST00000557320 CD28P10747 220 aa11.09□□□□□ -0.63
PAPOLA-223ENST00000557320 POLR2KP53803 58 aaKnown RBP11.09□□□□□ -0.63
PAPOLA-223ENST00000557320 IGLV11-55A0A075B6I3 123 aa11.08□□□□□ -0.64
PAPOLA-223ENST00000557320 A0A0J9YX75 114 aa11.08□□□□□ -0.64
PAPOLA-223ENST00000557320 ADGRG4Q8IZF6 3080 aa11.08□□□□□ -0.64
PAPOLA-223ENST00000557320 C14orf132Q9NPU4 83 aa11.08□□□□□ -0.64
PAPOLA-223ENST00000557320 NBPF19A0A087WUL8 3843 aa11.07□□□□□ -0.64
PAPOLA-223ENST00000557320 GHRHP01286 108 aa11.07□□□□□ -0.64
PAPOLA-223ENST00000557320 C1orf195Q5TG92 126 aa11.07□□□□□ -0.64
PAPOLA-223ENST00000557320 RBMY1BA6NDE4 496 aaKnown RBP11.07□□□□□ -0.64
PAPOLA-223ENST00000557320 RBMY1EA6NEQ0 496 aaKnown RBP11.07□□□□□ -0.64
PAPOLA-223ENST00000557320 F8W735 103 aaPredicted RBP11.07□□□□□ -0.64
PAPOLA-223ENST00000557320 RBMY1DP0C7P1 496 aaKnown RBP11.07□□□□□ -0.64
PAPOLA-223ENST00000557320 RBMY1A1P0DJD3 496 aaKnown RBP11.07□□□□□ -0.64
PAPOLA-223ENST00000557320 RBMY1CP0DJD4 496 aa11.07□□□□□ -0.64
PAPOLA-223ENST00000557320 RBMY1FQ15415 496 aaKnown RBP11.07□□□□□ -0.64
PAPOLA-223ENST00000557320 LITAFQ99732 161 aa11.07□□□□□ -0.64
PAPOLA-223ENST00000557320 UPK3BQ9BT76 320 aa11.06□□□□□ -0.64
PAPOLA-223ENST00000557320 TRAV23DV6A0A075B6W5 121 aa11.06□□□□□ -0.64
PAPOLA-223ENST00000557320 CREBBPQ92793 2442 aa11.06□□□□□ -0.64
PAPOLA-223ENST00000557320 FAM223BA6NKX1 122 aa11.06□□□□□ -0.64
PAPOLA-223ENST00000557320 KRTAP10-9P60411 292 aa11.06□□□□□ -0.64
PAPOLA-223ENST00000557320 C9orf47Q6ZRZ4 202 aa11.06□□□□□ -0.64
PAPOLA-223ENST00000557320 VMO1Q7Z5L0 202 aa11.06□□□□□ -0.64
PAPOLA-223ENST00000557320 PRIMA1Q86XR5 153 aa11.06□□□□□ -0.64
PAPOLA-223ENST00000557320 C9orf85Q96MD7 179 aa11.05□□□□□ -0.64
PAPOLA-223ENST00000557320 FBN2P35556 2912 aa11.05□□□□□ -0.64
PAPOLA-223ENST00000557320 CLEC19AQ6UXS0 136 aa11.05□□□□□ -0.64
PAPOLA-223ENST00000557320 TMEM178BH3BS89 294 aa11.04□□□□□ -0.64
PAPOLA-223ENST00000557320 NDUFC2O95298 119 aa11.04□□□□□ -0.64
PAPOLA-223ENST00000557320 ECSCRQ19T08 205 aa11.04□□□□□ -0.64
PAPOLA-223ENST00000557320 IGHV1-58A0A0C4DH39 117 aa11.04□□□□□ -0.64
PAPOLA-223ENST00000557320 IGHV1-69P01742 117 aa11.04□□□□□ -0.64
PAPOLA-223ENST00000557320 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
PAPOLA-223ENST00000557320 TMEM86BQ8N661 226 aa11.04□□□□□ -0.64
PAPOLA-223ENST00000557320 ZFAND3Q9H8U3 227 aa11.04□□□□□ -0.64
PAPOLA-223ENST00000557320 IGLV1-47P01700 117 aa11.04□□□□□ -0.64
PAPOLA-223ENST00000557320 C9orf139Q6ZV77 190 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms