RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 COX7A2LO14548 114 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 NPFFO15130 113 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 BRI3O95415 125 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 BAALC-AS2P0C853 105 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 INAFM2P0DMQ5 153 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV4-30-4P0DP06 118 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 CD28P10747 220 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 COX7CP15954 63 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 KRTAP10-3P60369 221 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 HERVK_113P63121 156 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 GAGE2AQ6NT46 116 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 C5orf38Q86SI9 138 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 TMEM219Q86XT9 240 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 MED12LQ86YW9 2145 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 DAND5Q8N907 189 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 DCANP1Q8TF63 244 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 CLEC2BQ92478 149 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 VSIG2Q96IQ7 327 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 C9orf85Q96MD7 179 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 LITAFQ99732 161 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 OVOL2Q9BRP0 275 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 PPDPFQ9H3Y8 114 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 EDA2RQ9HAV5 297 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 CSDC2Q9Y534 153 aaKnown RBP2.1□□□□□ -2.07
SLIRP-208ENST00000556956 GON4LQ3T8J9 2241 aa2.1□□□□□ -2.07
SLIRP-208ENST00000556956 NCOR1O75376 2440 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 IGHV1OR15-1A0A075B7D0 117 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 TRAV12-3A0A0B4J271 114 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 SMIM9A6NGZ8 99 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 G3V318 75 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 NDUFA1O15239 70 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 CRYGAP11844 174 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 ZNF415Q09FC8 603 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 FAM74A4Q5TZK3 123 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 FAM222AQ5U5X8 452 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 TMEM61Q8N0U2 210 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 C5orf56Q8N8D9 126 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 DEFB124Q8NES8 71 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 OPRPNQ99935 248 aaPredicted RBP2.09□□□□□ -2.07
SLIRP-208ENST00000556956 CITED2Q99967 270 aaPredicted RBP2.09□□□□□ -2.07
SLIRP-208ENST00000556956 RHPN1-AS1Q9BWJ2 59 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 SIRPDQ9H106 197 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 JPT2Q9H910 190 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 UBTD1Q9HAC8 227 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 MOB4Q9Y3A3 225 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 KNL1Q8NG31 2342 aa2.09□□□□□ -2.07
SLIRP-208ENST00000556956 ZNF407Q9C0G0 2248 aa2.09□□□□□ -2.08
SLIRP-208ENST00000556956 HCFC1P51610 2035 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 DOCK7Q96N67 2140 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 TRAV13-2A0A0B4J235 113 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 F6UB75 175 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 TMEM258P61165 79 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 SNRPD3P62318 126 aaKnown RBP2.08□□□□□ -2.08
SLIRP-208ENST00000556956 RPL18AQ02543 176 aaKnown RBP2.08□□□□□ -2.08
SLIRP-208ENST00000556956 DAZ2Q13117 558 aaKnown RBP2.08□□□□□ -2.08
SLIRP-208ENST00000556956 FBXL19-AS1Q494R0 122 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 ADAMTSL4-AS1Q5T5F5 129 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 SDIM1Q6ZPB5 146 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 FAM19A5Q7Z5A7 132 aaPredicted RBP2.08□□□□□ -2.08
SLIRP-208ENST00000556956 DAZ4Q86SG3 579 aaKnown RBP2.08□□□□□ -2.08
SLIRP-208ENST00000556956 LINC01560Q8TB33 94 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 LINC00308Q8TCZ7 52 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 DEFB104AQ8WTQ1 72 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 PRORYQ9H606 182 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 DAZ1Q9NQZ3 744 aaKnown RBP2.08□□□□□ -2.08
SLIRP-208ENST00000556956 DAZ3Q9NR90 486 aaKnown RBP2.08□□□□□ -2.08
SLIRP-208ENST00000556956 LINC00527Q9UJ94 153 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 ZDBF2Q9HCK1 2354 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 ESPL1Q14674 2120 aa2.08□□□□□ -2.08
SLIRP-208ENST00000556956 USF3Q68DE3 2245 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 COL6A3P12111 3177 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 DMDP11532 3685 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 IGKV3-7A0A075B6H7 116 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 IGLV5-45A0A087WSX0 123 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 LOC107984640A0A0U1RRK4 108 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 NDUFC2-KCTD14E9PQ53 114 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 H0YGX0 51 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 SAA4P35542 130 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 NPC2P61916 151 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 HIST1H4AP62805 103 aaKnown RBP2.07□□□□□ -2.08
SLIRP-208ENST00000556956 KLRB1Q12918 225 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 S100A7L2Q5SY68 101 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 HIST2H2BCQ6DN03 193 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 HIST2H2BDQ6DRA6 164 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 C11orf71Q6IPW1 123 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 Q6JHZ5 121 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 CEMP1Q6PRD7 247 aaPredicted RBP2.07□□□□□ -2.08
SLIRP-208ENST00000556956 UNQ9165/PRO28630Q6UXU0 137 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 SERP2Q8N6R1 65 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 C3orf56Q8N813 242 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 SMCR5Q8TEV8 140 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 C2orf48Q96LS8 159 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 UBE2D4Q9Y2X8 147 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 BDP1A6H8Y1 2624 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 LAMA1P25391 3075 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 SDK1Q7Z5N4 2213 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 TANC2Q9HCD6 1990 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 MYO15AQ9UKN7 3530 aa2.07□□□□□ -2.08
SLIRP-208ENST00000556956 FREM1Q5H8C1 2179 aa2.06□□□□□ -2.08
SLIRP-208ENST00000556956 CUL9Q8IWT3 2517 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms