RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 NKX2-5P52952 324 aaPredicted RBP11□□□□□ -0.65
CHGA-206ENST00000556876 C9orf62Q8N4C0 152 aa11□□□□□ -0.65
CHGA-206ENST00000556876 C20orf203Q8NBC4 194 aa11□□□□□ -0.65
CHGA-206ENST00000556876 IGLV10-54A0A075B6I4 117 aa10.99□□□□□ -0.65
CHGA-206ENST00000556876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.99□□□□□ -0.65
CHGA-206ENST00000556876 SULT1A2P50226 295 aa10.98□□□□□ -0.65
CHGA-206ENST00000556876 MEF2BQ02080 365 aaPredicted RBP10.98□□□□□ -0.65
CHGA-206ENST00000556876 SMIM15Q7Z3B0 74 aa10.98□□□□□ -0.65
CHGA-206ENST00000556876 PKHD1L1Q86WI1 4243 aa10.98□□□□□ -0.65
CHGA-206ENST00000556876 NTF3P20783 257 aa10.97□□□□□ -0.65
CHGA-206ENST00000556876 AMTP48728 403 aa10.97□□□□□ -0.65
CHGA-206ENST00000556876 TEX261Q6UWH6 196 aa10.97□□□□□ -0.65
CHGA-206ENST00000556876 FAM210AQ96ND0 272 aa10.97□□□□□ -0.65
CHGA-206ENST00000556876 MED9Q9NWA0 146 aa10.97□□□□□ -0.65
CHGA-206ENST00000556876 PKIGQ9Y2B9 76 aa10.97□□□□□ -0.65
CHGA-206ENST00000556876 H7C423 109 aa10.96□□□□□ -0.65
CHGA-206ENST00000556876 LYZL1Q6UWQ5 148 aa10.96□□□□□ -0.65
CHGA-206ENST00000556876 IGLV4-60A0A075B6I1 120 aa10.95□□□□□ -0.66
CHGA-206ENST00000556876 NCR2O95944 276 aa10.95□□□□□ -0.66
CHGA-206ENST00000556876 C7orf33Q8WU49 177 aa10.95□□□□□ -0.66
CHGA-206ENST00000556876 CNFNQ9BYD5 112 aa10.95□□□□□ -0.66
CHGA-206ENST00000556876 RAB19A4D1S5 217 aa10.94□□□□□ -0.66
CHGA-206ENST00000556876 CTRLP40313 264 aa10.94□□□□□ -0.66
CHGA-206ENST00000556876 TWIST1Q15672 202 aa10.94□□□□□ -0.66
CHGA-206ENST00000556876 UBR4Q5T4S7 5183 aa10.93□□□□□ -0.66
CHGA-206ENST00000556876 A0A087WYN8 130 aa10.93□□□□□ -0.66
CHGA-206ENST00000556876 RPS10P46783 165 aaKnown RBP10.93□□□□□ -0.66
CHGA-206ENST00000556876 AMMECR1LQ6DCA0 310 aa10.93□□□□□ -0.66
CHGA-206ENST00000556876 SPACA4Q8TDM5 124 aa10.93□□□□□ -0.66
CHGA-206ENST00000556876 PANO1I0J062 215 aa10.92□□□□□ -0.66
CHGA-206ENST00000556876 BCL2P10415 239 aa10.92□□□□□ -0.66
CHGA-206ENST00000556876 NUDT10Q8NFP7 164 aa10.92□□□□□ -0.66
CHGA-206ENST00000556876 NUDT11Q96G61 164 aa10.92□□□□□ -0.66
CHGA-206ENST00000556876 PLAC8Q9NZF1 115 aa10.92□□□□□ -0.66
CHGA-206ENST00000556876 LINC00474Q9P2X8 69 aa10.92□□□□□ -0.66
CHGA-206ENST00000556876 HNRNPA3P51991 378 aaKnown RBP10.91□□□□□ -0.66
CHGA-206ENST00000556876 RPP21Q9H633 154 aaKnown RBP10.91□□□□□ -0.66
CHGA-206ENST00000556876 GAGE12HA6NDE8 117 aa10.9□□□□□ -0.66
CHGA-206ENST00000556876 NDUFS6O75380 124 aaKnown RBP10.9□□□□□ -0.66
CHGA-206ENST00000556876 ZNF25P17030 456 aaPredicted RBP10.9□□□□□ -0.66
CHGA-206ENST00000556876 GFRA4Q9GZZ7 299 aa10.9□□□□□ -0.66
CHGA-206ENST00000556876 SLPIP03973 132 aa10.89□□□□□ -0.67
CHGA-206ENST00000556876 BTF3L4Q96K17 158 aa10.89□□□□□ -0.67
CHGA-206ENST00000556876 TRBV20OR9-2A0A075B6H5 130 aa10.88□□□□□ -0.67
CHGA-206ENST00000556876 APCSP02743 223 aa10.88□□□□□ -0.67
CHGA-206ENST00000556876 SLC51BQ86UW2 128 aa10.88□□□□□ -0.67
CHGA-206ENST00000556876 GATD1Q8NB37 220 aa10.88□□□□□ -0.67
CHGA-206ENST00000556876 COX6A2Q02221 97 aa10.87□□□□□ -0.67
CHGA-206ENST00000556876 RNASEKQ6P5S7 137 aaKnown RBP10.87□□□□□ -0.67
CHGA-206ENST00000556876 C15orf56Q8N910 161 aa10.87□□□□□ -0.67
CHGA-206ENST00000556876 CHCHD10Q8WYQ3 142 aaPredicted RBP10.87□□□□□ -0.67
CHGA-206ENST00000556876 TMEM101Q96IK0 257 aa10.87□□□□□ -0.67
CHGA-206ENST00000556876 GVQW2A0A096LPI5 108 aaPredicted RBP10.86□□□□□ -0.67
CHGA-206ENST00000556876 MT1HL1P0DM35 61 aa10.86□□□□□ -0.67
CHGA-206ENST00000556876 IGKV3OR2-268A0A0C4DH90 116 aa10.85□□□□□ -0.67
CHGA-206ENST00000556876 A8MWL6 223 aa10.85□□□□□ -0.67
CHGA-206ENST00000556876 I3L3M4 83 aa10.85□□□□□ -0.67
CHGA-206ENST00000556876 CHTF8P0CG12 524 aa10.85□□□□□ -0.67
CHGA-206ENST00000556876 FGF6P10767 208 aa10.85□□□□□ -0.67
CHGA-206ENST00000556876 PMCHP20382 165 aa10.85□□□□□ -0.67
CHGA-206ENST00000556876 OR5A1Q8NGJ0 315 aa10.85□□□□□ -0.67
CHGA-206ENST00000556876 BORCS7Q96B45 105 aa10.85□□□□□ -0.67
CHGA-206ENST00000556876 SDHAF1A6NFY7 115 aa10.84□□□□□ -0.67
CHGA-206ENST00000556876 TMEM250H0YL14 139 aa10.84□□□□□ -0.67
CHGA-206ENST00000556876 MAJINQ3KP22 176 aa10.84□□□□□ -0.67
CHGA-206ENST00000556876 OCC1Q8TAD7 63 aa10.84□□□□□ -0.67
CHGA-206ENST00000556876 GTSF1Q8WW33 167 aa10.84□□□□□ -0.67
CHGA-206ENST00000556876 TRBV6-5A0A0K0K1A5 114 aa10.83□□□□□ -0.68
CHGA-206ENST00000556876 PHOX2AO14813 284 aa10.83□□□□□ -0.68
CHGA-206ENST00000556876 SMAGPQ0VAQ4 97 aa10.83□□□□□ -0.68
CHGA-206ENST00000556876 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
CHGA-206ENST00000556876 TCTE3Q8IZS6 198 aa10.83□□□□□ -0.68
CHGA-206ENST00000556876 RNASE7Q9H1E1 156 aaKnown RBP10.83□□□□□ -0.68
CHGA-206ENST00000556876 TRAV26-2A0A0B4J265 109 aa10.82□□□□□ -0.68
CHGA-206ENST00000556876 IGHV1-58A0A0C4DH39 117 aa10.82□□□□□ -0.68
CHGA-206ENST00000556876 GATCO43716 136 aaKnown RBP10.82□□□□□ -0.68
CHGA-206ENST00000556876 FOXA3P55318 350 aaPredicted RBP10.82□□□□□ -0.68
CHGA-206ENST00000556876 HIGD2BQ4VC39 106 aa10.82□□□□□ -0.68
CHGA-206ENST00000556876 CT83Q5H943 113 aa10.82□□□□□ -0.68
CHGA-206ENST00000556876 Q6ZNX1 250 aa10.82□□□□□ -0.68
CHGA-206ENST00000556876 STPG4Q8N801 248 aa10.82□□□□□ -0.68
CHGA-206ENST00000556876 SS18Q15532 418 aa10.81□□□□□ -0.68
CHGA-206ENST00000556876 PRSS3P2Q8NHM4 247 aa10.81□□□□□ -0.68
CHGA-206ENST00000556876 MRAP2Q96G30 205 aa10.81□□□□□ -0.68
CHGA-206ENST00000556876 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.8□□□□□ -0.68
CHGA-206ENST00000556876 IGKV2-24A0A0C4DH68 120 aa10.8□□□□□ -0.68
CHGA-206ENST00000556876 IGKV2-29A2NJV5 120 aaPredicted RBP10.8□□□□□ -0.68
CHGA-206ENST00000556876 K7EN84 100 aa10.8□□□□□ -0.68
CHGA-206ENST00000556876 CCL25O15444 150 aa10.8□□□□□ -0.68
CHGA-206ENST00000556876 BLOC1S1P78537 153 aa10.8□□□□□ -0.68
CHGA-206ENST00000556876 FOXI1Q12951 378 aa10.8□□□□□ -0.68
CHGA-206ENST00000556876 RPL39LQ96EH5 51 aaKnown RBP10.8□□□□□ -0.68
CHGA-206ENST00000556876 LINC01600Q96MT4 127 aa10.8□□□□□ -0.68
CHGA-206ENST00000556876 ST20Q9HBF5 79 aa10.8□□□□□ -0.68
CHGA-206ENST00000556876 PPP1R17O96001 155 aa10.79□□□□□ -0.68
CHGA-206ENST00000556876 REG3GQ6UW15 175 aa10.79□□□□□ -0.68
CHGA-206ENST00000556876 ISOC2Q96AB3 205 aa10.79□□□□□ -0.68
CHGA-206ENST00000556876 LINC00959A0A1B0GUT2 108 aa10.78□□□□□ -0.68
CHGA-206ENST00000556876 FAM231BA6NCW3 169 aa10.78□□□□□ -0.68
CHGA-206ENST00000556876 ZNF561-AS1K7EIQ3 104 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms