RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ENHOQ6UWT2 76 aa15.17■□□□□ 0.02
TDP1-216ENST00000556867 A0A1B0GW15 77 aa15.16■□□□□ 0.02
TDP1-216ENST00000556867 PPP1R2P9O14990 202 aa15.16■□□□□ 0.02
TDP1-216ENST00000556867 GAS8-AS1O95177 125 aa15.16■□□□□ 0.02
TDP1-216ENST00000556867 NCR2O95944 276 aa15.16■□□□□ 0.02
TDP1-216ENST00000556867 Q8N814 137 aa15.16■□□□□ 0.02
TDP1-216ENST00000556867 MAPKAPK5-AS1Q8N8E1 139 aa15.16■□□□□ 0.02
TDP1-216ENST00000556867 DEFB104AQ8WTQ1 72 aa15.16■□□□□ 0.02
TDP1-216ENST00000556867 PRR34Q9NV39 138 aa15.16■□□□□ 0.02
TDP1-216ENST00000556867 A0A1B0GUV1 79 aa15.14■□□□□ 0.01
TDP1-216ENST00000556867 CDK2AP2O75956 126 aa15.14■□□□□ 0.01
TDP1-216ENST00000556867 WFDC2Q14508 124 aa15.14■□□□□ 0.01
TDP1-216ENST00000556867 UQCC3Q6UW78 93 aa15.14■□□□□ 0.01
TDP1-216ENST00000556867 NTN5Q8WTR8 489 aaPredicted RBP15.14■□□□□ 0.01
TDP1-216ENST00000556867 RPS10P46783 165 aaKnown RBP15.13■□□□□ 0.01
TDP1-216ENST00000556867 CAMPP49913 170 aa15.13■□□□□ 0.01
TDP1-216ENST00000556867 MIAQ16674 131 aa15.13■□□□□ 0.01
TDP1-216ENST00000556867 TMEM70Q9BUB7 260 aa15.13■□□□□ 0.01
TDP1-216ENST00000556867 C1orf43Q9BWL3 253 aa15.13■□□□□ 0.01
TDP1-216ENST00000556867 ST20Q9HBF5 79 aa15.13■□□□□ 0.01
TDP1-216ENST00000556867 A0A1B0GXF2 115 aa15.12■□□□□ 0.01
TDP1-216ENST00000556867 UBE2L6O14933 153 aa15.12■□□□□ 0.01
TDP1-216ENST00000556867 FAM104BQ5XKR9 115 aa15.12■□□□□ 0.01
TDP1-216ENST00000556867 C20orf203Q8NBC4 194 aa15.12■□□□□ 0.01
TDP1-216ENST00000556867 I3L3M4 83 aa15.11■□□□□ 0.01
TDP1-216ENST00000556867 APCSP02743 223 aa15.11■□□□□ 0.01
TDP1-216ENST00000556867 S100A8P05109 93 aa15.11■□□□□ 0.01
TDP1-216ENST00000556867 HBBP68871 147 aa15.11■□□□□ 0.01
TDP1-216ENST00000556867 LINC00269Q8N2A0 174 aa15.11■□□□□ 0.01
TDP1-216ENST00000556867 BAALCQ8WXS3 180 aa15.11■□□□□ 0.01
TDP1-216ENST00000556867 APOBP04114 4563 aaKnown RBP15.11■□□□□ 0.01
TDP1-216ENST00000556867 IGLV4-60A0A075B6I1 120 aa15.1■□□□□ 0.01
TDP1-216ENST00000556867 SMKR1H3BMG3 65 aa15.1■□□□□ 0.01
TDP1-216ENST00000556867 PPP1R17O96001 155 aa15.1■□□□□ 0.01
TDP1-216ENST00000556867 MT-ND4LP03901 98 aa15.1■□□□□ 0.01
TDP1-216ENST00000556867 PMCHP20382 165 aa15.1■□□□□ 0.01
TDP1-216ENST00000556867 POLR2KP53803 58 aaKnown RBP15.1■□□□□ 0.01
TDP1-216ENST00000556867 MRPL54Q6P161 138 aaKnown RBP15.1■□□□□ 0.01
TDP1-216ENST00000556867 ANAPC16Q96DE5 110 aa15.1■□□□□ 0.01
TDP1-216ENST00000556867 HSPG2P98160 4391 aa15.1■□□□□ 0.01
TDP1-216ENST00000556867 IGLV5-52A0A0A0MRZ9 124 aa15.09■□□□□ 0.01
TDP1-216ENST00000556867 TRBV27A0A0K0K1C4 114 aa15.09■□□□□ 0.01
TDP1-216ENST00000556867 LECT2O14960 151 aa15.09■□□□□ 0.01
TDP1-216ENST00000556867 MRPL51Q4U2R6 128 aaKnown RBP15.09■□□□□ 0.01
TDP1-216ENST00000556867 CLPSL2Q6UWE3 100 aa15.09■□□□□ 0.01
TDP1-216ENST00000556867 NRACQ8N912 160 aa15.09■□□□□ 0.01
TDP1-216ENST00000556867 H7C423 109 aa15.08■□□□□ 0
TDP1-216ENST00000556867 REG3AQ06141 175 aa15.08■□□□□ 0
TDP1-216ENST00000556867 ATP5L2Q7Z4Y8 100 aa15.08■□□□□ 0
TDP1-216ENST00000556867 TMEM218A2RU14 115 aa15.07■□□□□ 0
TDP1-216ENST00000556867 F8W036 122 aa15.07■□□□□ 0
TDP1-216ENST00000556867 TSHBP01222 138 aa15.07■□□□□ 0
TDP1-216ENST00000556867 ADCYAP1P18509 176 aa15.07■□□□□ 0
TDP1-216ENST00000556867 LINC00862A6NCI5 91 aa15.06■□□□□ 0
TDP1-216ENST00000556867 GCSHP23434 173 aa15.06■□□□□ 0
TDP1-216ENST00000556867 KRTAP10-1P60331 282 aa15.06■□□□□ 0
TDP1-216ENST00000556867 TMEM242Q9NWH2 141 aa15.06■□□□□ 0
TDP1-216ENST00000556867 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.05■□□□□ -0
TDP1-216ENST00000556867 IGKV2-29A2NJV5 120 aaPredicted RBP15.05■□□□□ -0
TDP1-216ENST00000556867 ESDP10768 282 aa15.05■□□□□ -0
TDP1-216ENST00000556867 SUMO2P61956 95 aaKnown RBP15.05■□□□□ -0
TDP1-216ENST00000556867 KRTAP26-1Q6PEX3 210 aa15.05■□□□□ -0
TDP1-216ENST00000556867 COMMD7Q86VX2 200 aa15.04■□□□□ -0
TDP1-216ENST00000556867 TRAV8-4A0A0B4J246 113 aa15.03■□□□□ -0
TDP1-216ENST00000556867 VCYO14598 125 aa15.03■□□□□ -0
TDP1-216ENST00000556867 CKS2P33552 79 aa15.03■□□□□ -0
TDP1-216ENST00000556867 AMMECR1LQ6DCA0 310 aa15.03■□□□□ -0
TDP1-216ENST00000556867 TRBV24-1A0A075B6N3 115 aa15.02■□□□□ -0
TDP1-216ENST00000556867 HLA-DQA1P01909 254 aa15.02■□□□□ -0
TDP1-216ENST00000556867 FGF6P10767 208 aa15.02■□□□□ -0
TDP1-216ENST00000556867 C20orf78Q9BR46 151 aa15.02■□□□□ -0
TDP1-216ENST00000556867 ZNF25P17030 456 aaPredicted RBP15.01□□□□□ -0.01
TDP1-216ENST00000556867 RNASEKQ6P5S7 137 aaKnown RBP15.01□□□□□ -0.01
TDP1-216ENST00000556867 SEC11CQ9BY50 192 aa15.01□□□□□ -0.01
TDP1-216ENST00000556867 IGLV2-33A0A075B6J2 118 aaPredicted RBP15□□□□□ -0.01
TDP1-216ENST00000556867 D6R8Y8 96 aa15□□□□□ -0.01
TDP1-216ENST00000556867 RPL32P62910 135 aaKnown RBP15□□□□□ -0.01
TDP1-216ENST00000556867 C14orf177Q52M58 125 aa15□□□□□ -0.01
TDP1-216ENST00000556867 IGLV10-54A0A075B6I4 117 aa14.99□□□□□ -0.01
TDP1-216ENST00000556867 C7orf77A4D0Y5 90 aa14.99□□□□□ -0.01
TDP1-216ENST00000556867 TNFRSF6BO95407 300 aa14.99□□□□□ -0.01
TDP1-216ENST00000556867 PPBPP02775 128 aa14.99□□□□□ -0.01
TDP1-216ENST00000556867 FCER1GP30273 86 aa14.99□□□□□ -0.01
TDP1-216ENST00000556867 KIR2DL4Q99706 377 aa14.99□□□□□ -0.01
TDP1-216ENST00000556867 USP17L23D6RBM5 183 aa14.98□□□□□ -0.01
TDP1-216ENST00000556867 BTF3L4Q96K17 158 aa14.98□□□□□ -0.01
TDP1-216ENST00000556867 IMMP2LQ96T52 175 aa14.98□□□□□ -0.01
TDP1-216ENST00000556867 PHOX2AO14813 284 aa14.97□□□□□ -0.01
TDP1-216ENST00000556867 MRPL52Q86TS9 123 aaKnown RBP14.97□□□□□ -0.01
TDP1-216ENST00000556867 CTDSP1Q9GZU7 261 aa14.97□□□□□ -0.01
TDP1-216ENST00000556867 NPYP01303 97 aa14.96□□□□□ -0.01
TDP1-216ENST00000556867 TMEM101Q96IK0 257 aa14.96□□□□□ -0.01
TDP1-216ENST00000556867 XGP55808 180 aa14.95□□□□□ -0.02
TDP1-216ENST00000556867 ORMDL3Q8N138 153 aa14.95□□□□□ -0.02
TDP1-216ENST00000556867 OR5A1Q8NGJ0 315 aa14.95□□□□□ -0.02
TDP1-216ENST00000556867 SMIM2Q9BVW6 85 aa14.95□□□□□ -0.02
TDP1-216ENST00000556867 KRTAP17-1Q9BYP8 105 aa14.95□□□□□ -0.02
TDP1-216ENST00000556867 TCAPO15273 167 aa14.94□□□□□ -0.02
TDP1-216ENST00000556867 C10orf91Q5T1B1 145 aa14.94□□□□□ -0.02
TDP1-216ENST00000556867 IGKV3OR2-268A0A0C4DH90 116 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms