RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 RNF185Q96GF1 192 aa6.85□□□□□ -1.31
SNX6-208ENST00000556712 TMEM243Q9BU79 118 aa6.85□□□□□ -1.31
SNX6-208ENST00000556712 NCR2O95944 276 aa6.84□□□□□ -1.31
SNX6-208ENST00000556712 GCSHP23434 173 aa6.84□□□□□ -1.31
SNX6-208ENST00000556712 PKIAP61925 76 aa6.84□□□□□ -1.31
SNX6-208ENST00000556712 COTL1Q14019 142 aa6.84□□□□□ -1.31
SNX6-208ENST00000556712 AMN1Q8IY45 258 aa6.84□□□□□ -1.31
SNX6-208ENST00000556712 LINC00269Q8N2A0 174 aa6.84□□□□□ -1.31
SNX6-208ENST00000556712 C20orf203Q8NBC4 194 aa6.84□□□□□ -1.31
SNX6-208ENST00000556712 NTN5Q8WTR8 489 aaPredicted RBP6.84□□□□□ -1.31
SNX6-208ENST00000556712 C1orf43Q9BWL3 253 aa6.84□□□□□ -1.31
SNX6-208ENST00000556712 PCLOQ9Y6V0 5065 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 IGLV4-60A0A075B6I1 120 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 FAM231BA6NCW3 169 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 SDHAF1A6NFY7 115 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 SMKR1H3BMG3 65 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 HLA-DQA1P01909 254 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 RPS10P46783 165 aaKnown RBP6.83□□□□□ -1.32
SNX6-208ENST00000556712 Q0VG73 95 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 FRZBQ92765 325 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 TMEM191AQ9H0A3 160 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 SMDT1Q9H4I9 107 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 NAT8BQ9UHF3 227 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 COX11Q9Y6N1 276 aa6.83□□□□□ -1.32
SNX6-208ENST00000556712 IGLV10-54A0A075B6I4 117 aa6.82□□□□□ -1.32
SNX6-208ENST00000556712 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.82□□□□□ -1.32
SNX6-208ENST00000556712 IGKV2-29A2NJV5 120 aaPredicted RBP6.82□□□□□ -1.32
SNX6-208ENST00000556712 UBE2L6O14933 153 aa6.82□□□□□ -1.32
SNX6-208ENST00000556712 RAB4AP20338 218 aa6.82□□□□□ -1.32
SNX6-208ENST00000556712 XGP55808 180 aa6.82□□□□□ -1.32
SNX6-208ENST00000556712 RIGQ13278 110 aa6.82□□□□□ -1.32
SNX6-208ENST00000556712 LINC01620Q4KN68 170 aa6.82□□□□□ -1.32
SNX6-208ENST00000556712 PRR34Q9NV39 138 aa6.82□□□□□ -1.32
SNX6-208ENST00000556712 DNAH8Q96JB1 4490 aa6.82□□□□□ -1.32
SNX6-208ENST00000556712 ABCA13Q86UQ4 5058 aa6.81□□□□□ -1.32
SNX6-208ENST00000556712 SMIM27A0A1W2PRY6 76 aa6.81□□□□□ -1.32
SNX6-208ENST00000556712 APCSP02743 223 aa6.81□□□□□ -1.32
SNX6-208ENST00000556712 RAB14P61106 215 aa6.81□□□□□ -1.32
SNX6-208ENST00000556712 IFITM2Q01629 132 aa6.81□□□□□ -1.32
SNX6-208ENST00000556712 REG3AQ06141 175 aa6.81□□□□□ -1.32
SNX6-208ENST00000556712 MIAQ16674 131 aa6.81□□□□□ -1.32
SNX6-208ENST00000556712 LCE2AQ5TA79 106 aaPredicted RBP6.81□□□□□ -1.32
SNX6-208ENST00000556712 MRPL54Q6P161 138 aaKnown RBP6.81□□□□□ -1.32
SNX6-208ENST00000556712 TMEM242Q9NWH2 141 aa6.81□□□□□ -1.32
SNX6-208ENST00000556712 TRBV6-5A0A0K0K1A5 114 aa6.8□□□□□ -1.32
SNX6-208ENST00000556712 TSHBP01222 138 aa6.8□□□□□ -1.32
SNX6-208ENST00000556712 CAMPP49913 170 aa6.8□□□□□ -1.32
SNX6-208ENST00000556712 CLLU1Q5K131 121 aa6.8□□□□□ -1.32
SNX6-208ENST00000556712 KRTAP26-1Q6PEX3 210 aa6.8□□□□□ -1.32
SNX6-208ENST00000556712 Q8N1X5 172 aa6.8□□□□□ -1.32
SNX6-208ENST00000556712 ST20Q9HBF5 79 aa6.8□□□□□ -1.32
SNX6-208ENST00000556712 IGKV3OR2-268A0A0C4DH90 116 aa6.79□□□□□ -1.32
SNX6-208ENST00000556712 A0A1B0GUV1 79 aa6.79□□□□□ -1.32
SNX6-208ENST00000556712 USP17L23D6RBM5 183 aa6.79□□□□□ -1.32
SNX6-208ENST00000556712 I3L3M4 83 aa6.79□□□□□ -1.32
SNX6-208ENST00000556712 J3QL48 77 aa6.79□□□□□ -1.32
SNX6-208ENST00000556712 PMCHP20382 165 aa6.79□□□□□ -1.32
SNX6-208ENST00000556712 MRPL51Q4U2R6 128 aaKnown RBP6.79□□□□□ -1.32
SNX6-208ENST00000556712 NRACQ8N912 160 aa6.79□□□□□ -1.32
SNX6-208ENST00000556712 MRAP2Q96G30 205 aa6.79□□□□□ -1.32
SNX6-208ENST00000556712 TMEM70Q9BUB7 260 aa6.79□□□□□ -1.32
SNX6-208ENST00000556712 FAM30AQ9NZY2 134 aa6.79□□□□□ -1.32
SNX6-208ENST00000556712 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
SNX6-208ENST00000556712 AMMECR1LQ6DCA0 310 aa6.78□□□□□ -1.32
SNX6-208ENST00000556712 RNASEKQ6P5S7 137 aaKnown RBP6.78□□□□□ -1.32
SNX6-208ENST00000556712 A0A1B0GXF2 115 aa6.77□□□□□ -1.33
SNX6-208ENST00000556712 FGF6P10767 208 aa6.77□□□□□ -1.33
SNX6-208ENST00000556712 POLR2KP53803 58 aaKnown RBP6.77□□□□□ -1.33
SNX6-208ENST00000556712 HBBP68871 147 aa6.77□□□□□ -1.33
SNX6-208ENST00000556712 FAM104BQ5XKR9 115 aa6.77□□□□□ -1.33
SNX6-208ENST00000556712 PRSS1P07477 247 aa6.76□□□□□ -1.33
SNX6-208ENST00000556712 ESDP10768 282 aa6.76□□□□□ -1.33
SNX6-208ENST00000556712 ADCYAP1P18509 176 aa6.76□□□□□ -1.33
SNX6-208ENST00000556712 SMCPP49901 116 aaPredicted RBP6.76□□□□□ -1.33
SNX6-208ENST00000556712 SUMO2P61956 95 aaKnown RBP6.76□□□□□ -1.33
SNX6-208ENST00000556712 TRAV8-4A0A0B4J246 113 aa6.75□□□□□ -1.33
SNX6-208ENST00000556712 TRBV27A0A0K0K1C4 114 aa6.75□□□□□ -1.33
SNX6-208ENST00000556712 A0A1B0GW15 77 aa6.75□□□□□ -1.33
SNX6-208ENST00000556712 GAGE12HA6NDE8 117 aa6.75□□□□□ -1.33
SNX6-208ENST00000556712 PNRC1Q12796 327 aaPredicted RBP6.75□□□□□ -1.33
SNX6-208ENST00000556712 C14orf177Q52M58 125 aa6.75□□□□□ -1.33
SNX6-208ENST00000556712 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
SNX6-208ENST00000556712 Q6ZSA8 131 aa6.75□□□□□ -1.33
SNX6-208ENST00000556712 VPS13BQ7Z7G8 4022 aa6.75□□□□□ -1.33
SNX6-208ENST00000556712 C7orf77A4D0Y5 90 aa6.74□□□□□ -1.33
SNX6-208ENST00000556712 EPM2AB3EWF7 344 aa6.74□□□□□ -1.33
SNX6-208ENST00000556712 D6R8Y8 96 aa6.74□□□□□ -1.33
SNX6-208ENST00000556712 H7C423 109 aa6.74□□□□□ -1.33
SNX6-208ENST00000556712 PPP1R2P9O14990 202 aa6.74□□□□□ -1.33
SNX6-208ENST00000556712 NPYP01303 97 aa6.74□□□□□ -1.33
SNX6-208ENST00000556712 FCER1GP30273 86 aa6.74□□□□□ -1.33
SNX6-208ENST00000556712 CKS2P33552 79 aa6.74□□□□□ -1.33
SNX6-208ENST00000556712 Q5VSD8 79 aa6.74□□□□□ -1.33
SNX6-208ENST00000556712 FAT1Q14517 4588 aa6.73□□□□□ -1.33
SNX6-208ENST00000556712 VCYO14598 125 aa6.73□□□□□ -1.33
SNX6-208ENST00000556712 TNFRSF6BO95407 300 aa6.73□□□□□ -1.33
SNX6-208ENST00000556712 PPP1R17O96001 155 aa6.73□□□□□ -1.33
SNX6-208ENST00000556712 S100A8P05109 93 aa6.73□□□□□ -1.33
SNX6-208ENST00000556712 ZNF25P17030 456 aaPredicted RBP6.73□□□□□ -1.33
SNX6-208ENST00000556712 OR5A1Q8NGJ0 315 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms