RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 GTSF1Q8WW33 167 aa7.09□□□□□ -1.27
XRCC3-216ENST00000556682 SMIM7Q9BQ49 75 aa7.09□□□□□ -1.27
XRCC3-216ENST00000556682 PRR34Q9NV39 138 aa7.09□□□□□ -1.27
XRCC3-216ENST00000556682 FAM30AQ9NZY2 134 aa7.09□□□□□ -1.27
XRCC3-216ENST00000556682 TRAV8-4A0A0B4J246 113 aa7.08□□□□□ -1.28
XRCC3-216ENST00000556682 HAMPP81172 84 aa7.08□□□□□ -1.28
XRCC3-216ENST00000556682 REG3AQ06141 175 aa7.08□□□□□ -1.28
XRCC3-216ENST00000556682 FAM210AQ96ND0 272 aa7.08□□□□□ -1.28
XRCC3-216ENST00000556682 ZNF727A8MUV8 499 aa7.07□□□□□ -1.28
XRCC3-216ENST00000556682 USP17L23D6RBM5 183 aa7.07□□□□□ -1.28
XRCC3-216ENST00000556682 AMTP48728 403 aa7.07□□□□□ -1.28
XRCC3-216ENST00000556682 FOXA3P55318 350 aaPredicted RBP7.07□□□□□ -1.28
XRCC3-216ENST00000556682 CLPSL2Q6UWE3 100 aa7.07□□□□□ -1.28
XRCC3-216ENST00000556682 Q6ZSA8 131 aa7.07□□□□□ -1.28
XRCC3-216ENST00000556682 ABCA13Q86UQ4 5058 aa7.07□□□□□ -1.28
XRCC3-216ENST00000556682 FAM231BA6NCW3 169 aa7.06□□□□□ -1.28
XRCC3-216ENST00000556682 GHRHP01286 108 aa7.06□□□□□ -1.28
XRCC3-216ENST00000556682 LINC01551Q86U37 167 aa7.06□□□□□ -1.28
XRCC3-216ENST00000556682 GATD1Q8NB37 220 aa7.06□□□□□ -1.28
XRCC3-216ENST00000556682 CLRN3Q8NCR9 226 aa7.06□□□□□ -1.28
XRCC3-216ENST00000556682 TSKUQ8WUA8 353 aa7.06□□□□□ -1.28
XRCC3-216ENST00000556682 GFRA4Q9GZZ7 299 aa7.06□□□□□ -1.28
XRCC3-216ENST00000556682 OSTCQ9NRP0 149 aa7.06□□□□□ -1.28
XRCC3-216ENST00000556682 TRAV26-2A0A0B4J265 109 aa7.05□□□□□ -1.28
XRCC3-216ENST00000556682 A0A1B0GUT8 65 aa7.05□□□□□ -1.28
XRCC3-216ENST00000556682 NCR2O95944 276 aa7.05□□□□□ -1.28
XRCC3-216ENST00000556682 PLA2G1BP04054 148 aaKnown RBP7.05□□□□□ -1.28
XRCC3-216ENST00000556682 SRP19P09132 144 aaKnown RBP7.05□□□□□ -1.28
XRCC3-216ENST00000556682 LINC01620Q4KN68 170 aa7.05□□□□□ -1.28
XRCC3-216ENST00000556682 FAM74A3Q4VXF1 159 aa7.05□□□□□ -1.28
XRCC3-216ENST00000556682 AMMECR1LQ6DCA0 310 aa7.05□□□□□ -1.28
XRCC3-216ENST00000556682 DGAT2L7PQ6IED9 249 aa7.05□□□□□ -1.28
XRCC3-216ENST00000556682 C20orf203Q8NBC4 194 aa7.05□□□□□ -1.28
XRCC3-216ENST00000556682 IGLV4-60A0A075B6I1 120 aa7.04□□□□□ -1.28
XRCC3-216ENST00000556682 IGLV10-54A0A075B6I4 117 aa7.04□□□□□ -1.28
XRCC3-216ENST00000556682 A0A1B0GVG6 124 aa7.04□□□□□ -1.28
XRCC3-216ENST00000556682 SDHAF1A6NFY7 115 aa7.04□□□□□ -1.28
XRCC3-216ENST00000556682 HIGD1CA8MV81 97 aa7.04□□□□□ -1.28
XRCC3-216ENST00000556682 H7C423 109 aa7.04□□□□□ -1.28
XRCC3-216ENST00000556682 APCSP02743 223 aa7.04□□□□□ -1.28
XRCC3-216ENST00000556682 TMEM241Q24JQ0 296 aa7.04□□□□□ -1.28
XRCC3-216ENST00000556682 DEFB104AQ8WTQ1 72 aa7.04□□□□□ -1.28
XRCC3-216ENST00000556682 CHAC1Q9BUX1 264 aa7.04□□□□□ -1.28
XRCC3-216ENST00000556682 I3L3M4 83 aa7.03□□□□□ -1.28
XRCC3-216ENST00000556682 PRSS1P07477 247 aa7.03□□□□□ -1.28
XRCC3-216ENST00000556682 PMCHP20382 165 aa7.03□□□□□ -1.28
XRCC3-216ENST00000556682 RPL39LQ96EH5 51 aaKnown RBP7.03□□□□□ -1.28
XRCC3-216ENST00000556682 TMEM191AQ9H0A3 160 aa7.03□□□□□ -1.28
XRCC3-216ENST00000556682 AP5S1Q9NUS5 200 aa7.03□□□□□ -1.28
XRCC3-216ENST00000556682 RIGQ13278 110 aa7.02□□□□□ -1.29
XRCC3-216ENST00000556682 PEA15Q15121 130 aa7.02□□□□□ -1.29
XRCC3-216ENST00000556682 RNASEKQ6P5S7 137 aaKnown RBP7.02□□□□□ -1.29
XRCC3-216ENST00000556682 CFAP161Q6P656 301 aa7.02□□□□□ -1.29
XRCC3-216ENST00000556682 KRTAP26-1Q6PEX3 210 aa7.02□□□□□ -1.29
XRCC3-216ENST00000556682 SCXQ7RTU7 201 aa7.02□□□□□ -1.29
XRCC3-216ENST00000556682 MRAP2Q96G30 205 aa7.02□□□□□ -1.29
XRCC3-216ENST00000556682 SMDT1Q9H4I9 107 aa7.02□□□□□ -1.29
XRCC3-216ENST00000556682 ST20Q9HBF5 79 aa7.02□□□□□ -1.29
XRCC3-216ENST00000556682 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.01□□□□□ -1.29
XRCC3-216ENST00000556682 TRBV6-5A0A0K0K1A5 114 aa7.01□□□□□ -1.29
XRCC3-216ENST00000556682 PPP1R17O96001 155 aa7.01□□□□□ -1.29
XRCC3-216ENST00000556682 C9orf163Q8N9P6 203 aa7.01□□□□□ -1.29
XRCC3-216ENST00000556682 ISOC2Q96AB3 205 aa7.01□□□□□ -1.29
XRCC3-216ENST00000556682 BTF3L4Q96K17 158 aa7.01□□□□□ -1.29
XRCC3-216ENST00000556682 NAT8Q9UHE5 227 aa7.01□□□□□ -1.29
XRCC3-216ENST00000556682 NAT8BQ9UHF3 227 aa7.01□□□□□ -1.29
XRCC3-216ENST00000556682 IGKV3OR2-268A0A0C4DH90 116 aa7□□□□□ -1.29
XRCC3-216ENST00000556682 hDV102S1A0JD36 115 aa7□□□□□ -1.29
XRCC3-216ENST00000556682 FGF6P10767 208 aa7□□□□□ -1.29
XRCC3-216ENST00000556682 ZNF25P17030 456 aaPredicted RBP7□□□□□ -1.29
XRCC3-216ENST00000556682 ADIRFQ15847 76 aa7□□□□□ -1.29
XRCC3-216ENST00000556682 NUP35Q8NFH5 326 aa7□□□□□ -1.29
XRCC3-216ENST00000556682 TMEM101Q96IK0 257 aa7□□□□□ -1.29
XRCC3-216ENST00000556682 V9GYV3 84 aa7□□□□□ -1.29
XRCC3-216ENST00000556682 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.99□□□□□ -1.29
XRCC3-216ENST00000556682 IGKV2-29A2NJV5 120 aaPredicted RBP6.99□□□□□ -1.29
XRCC3-216ENST00000556682 RAB4AP20338 218 aa6.99□□□□□ -1.29
XRCC3-216ENST00000556682 CNBPP62633 177 aaKnown RBP6.99□□□□□ -1.29
XRCC3-216ENST00000556682 RPL23P62829 140 aaKnown RBP6.99□□□□□ -1.29
XRCC3-216ENST00000556682 CIRBP-AS1Q8TBR5 109 aa6.99□□□□□ -1.29
XRCC3-216ENST00000556682 TRBV27A0A0K0K1C4 114 aa6.98□□□□□ -1.29
XRCC3-216ENST00000556682 A0A1B0GW15 77 aa6.98□□□□□ -1.29
XRCC3-216ENST00000556682 GAGE12HA6NDE8 117 aa6.98□□□□□ -1.29
XRCC3-216ENST00000556682 VCYO14598 125 aa6.98□□□□□ -1.29
XRCC3-216ENST00000556682 SMAGPQ0VAQ4 97 aa6.98□□□□□ -1.29
XRCC3-216ENST00000556682 AMN1Q8IY45 258 aa6.98□□□□□ -1.29
XRCC3-216ENST00000556682 OR5A1Q8NGJ0 315 aa6.98□□□□□ -1.29
XRCC3-216ENST00000556682 CHCHD10Q8WYQ3 142 aaPredicted RBP6.98□□□□□ -1.29
XRCC3-216ENST00000556682 RNF185Q96GF1 192 aa6.98□□□□□ -1.29
XRCC3-216ENST00000556682 FAT1Q14517 4588 aa6.98□□□□□ -1.29
XRCC3-216ENST00000556682 ESDP10768 282 aa6.97□□□□□ -1.29
XRCC3-216ENST00000556682 POLR2KP53803 58 aaKnown RBP6.97□□□□□ -1.29
XRCC3-216ENST00000556682 DPH3Q96FX2 82 aa6.97□□□□□ -1.29
XRCC3-216ENST00000556682 TMEM242Q9NWH2 141 aa6.97□□□□□ -1.29
XRCC3-216ENST00000556682 DNAH8Q96JB1 4490 aa6.96□□□□□ -1.29
XRCC3-216ENST00000556682 IGHV3-64A0A075B6Q5 118 aa6.96□□□□□ -1.3
XRCC3-216ENST00000556682 SMIM27A0A1W2PRY6 76 aa6.96□□□□□ -1.3
XRCC3-216ENST00000556682 C7orf77A4D0Y5 90 aa6.96□□□□□ -1.3
XRCC3-216ENST00000556682 C9JQL5 133 aa6.96□□□□□ -1.3
XRCC3-216ENST00000556682 PPP1R2P9O14990 202 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms