RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 DLX4Q92988 240 aaPredicted RBP4.55□□□□□ -1.68
CPSF2-205ENST00000556622 RAB37Q96AX2 223 aa4.55□□□□□ -1.68
CPSF2-205ENST00000556622 UBE2E2Q96LR5 201 aa4.55□□□□□ -1.68
CPSF2-205ENST00000556622 DUX5Q96PT3 197 aa4.55□□□□□ -1.68
CPSF2-205ENST00000556622 MXRA5Q9NR99 2828 aa4.55□□□□□ -1.68
CPSF2-205ENST00000556622 SVEP1Q4LDE5 3571 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 IGHV1OR15-1A0A075B7D0 117 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 IGHV3OR16-8A0A075B7F1 116 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 ZNF815PA8K554 130 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 IGLL5B9A064 214 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 TMEM238C9JI98 176 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 TMEM262E9PQX1 116 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 CIDEAO60543 219 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 PSMB8P28062 276 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 POLR2KP53803 58 aaKnown RBP4.54□□□□□ -1.68
CPSF2-205ENST00000556622 RRN3P1Q2M238 152 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 DEFB112Q30KQ8 113 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 NSUN5P1Q3KNT7 163 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 ZFP2Q6ZN57 461 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 C11orf44Q8N8P7 122 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 BAALCQ8WXS3 180 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 DNAJC30Q96LL9 226 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 SIGMAR1Q99720 223 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 SPXQ9BT56 116 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 SPANXDQ9BXN6 97 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 SPANXA1Q9NS26 97 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 MRPL16Q9NX20 251 aaKnown RBP4.54□□□□□ -1.68
CPSF2-205ENST00000556622 MDFICQ9P1T7 246 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 PYGO1Q9Y3Y4 419 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 PLXNB1O43157 2135 aa4.54□□□□□ -1.68
CPSF2-205ENST00000556622 IGHV3OR16-13A0A075B7E8 117 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 IGHV3-49A0A0A0MS15 119 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 IGHV3-74A0A0B4J1X5 117 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 SDHAF1A6NFY7 115 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 M0QXV9 152 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 LGALS1P09382 135 aaKnown RBP4.53□□□□□ -1.68
CPSF2-205ENST00000556622 COX6CP09669 75 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 RNASE3P12724 160 aaKnown RBP4.53□□□□□ -1.68
CPSF2-205ENST00000556622 NFE4Q86UQ8 179 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.53□□□□□ -1.68
CPSF2-205ENST00000556622 DCANP1Q8TF63 244 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 LINC00467Q9BRT7 94 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 PRADC1Q9BSG0 188 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 KRTAP2-2Q9BYT5 123 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 ESM1Q9NQ30 184 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 TP53TG1Q9Y2A0 90 aa4.53□□□□□ -1.68
CPSF2-205ENST00000556622 IGKV2D-26A0A0A0MRZ7 120 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 TRAV26-2A0A0B4J265 109 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 A0A0J9YX75 114 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 IGIPA6NJ69 53 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 H3BMG7 143 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 K7EQG2 157 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 LEPROTO15243 131 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 FXYD7P58549 80 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 ZNF415Q09FC8 603 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 CIRBPQ14011 172 aaKnown RBP4.52□□□□□ -1.69
CPSF2-205ENST00000556622 ZNF56Q15929 161 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 LY6EQ16553 131 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 ZNF876PQ49A33 203 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 UNQ9165/PRO28630Q6UXU0 137 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 TMEM86BQ8N661 226 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 C3orf56Q8N813 242 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 SLC25A29Q8N8R3 303 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 RPL36ALQ969Q0 106 aaKnown RBP4.52□□□□□ -1.69
CPSF2-205ENST00000556622 RNF183Q96D59 192 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 C9orf85Q96MD7 179 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 PRO1854Q9UHT4 67 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 VPREB3Q9UKI3 123 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 ZNF256Q9Y2P7 627 aaPredicted RBP4.52□□□□□ -1.69
CPSF2-205ENST00000556622 KIF25-AS1Q9Y6Z4 181 aa4.52□□□□□ -1.69
CPSF2-205ENST00000556622 FBN1P35555 2871 aaKnown RBP4.52□□□□□ -1.69
CPSF2-205ENST00000556622 TRBV7-3A0A075B6L6 115 aa4.51□□□□□ -1.69
CPSF2-205ENST00000556622 TRAV12-3A0A0B4J271 114 aa4.51□□□□□ -1.69
CPSF2-205ENST00000556622 TRAV25A0A0B4J276 109 aa4.51□□□□□ -1.69
CPSF2-205ENST00000556622 IGHV3-16A0A0C4DH30 117 aa4.51□□□□□ -1.69
CPSF2-205ENST00000556622 J3QQQ9 107 aa4.51□□□□□ -1.69
CPSF2-205ENST00000556622 GNRH2O43555 120 aa4.51□□□□□ -1.69
CPSF2-205ENST00000556622 IGHV3-11P01762 117 aa4.51□□□□□ -1.69
CPSF2-205ENST00000556622 SCGB1C2P0DMR2 95 aa4.51□□□□□ -1.69
CPSF2-205ENST00000556622 GATA1P15976 413 aaPredicted RBP4.51□□□□□ -1.69
CPSF2-205ENST00000556622 FXYD2P54710 66 aa4.51□□□□□ -1.69
CPSF2-205ENST00000556622 TMEM170BQ5T4T1 132 aa4.51□□□□□ -1.69
CPSF2-205ENST00000556622 PHLDA1Q8WV24 401 aaPredicted RBP4.51□□□□□ -1.69
CPSF2-205ENST00000556622 A0A0B4J2C4 111 aa4.5□□□□□ -1.69
CPSF2-205ENST00000556622 A0A1B0GV72 72 aa4.5□□□□□ -1.69
CPSF2-205ENST00000556622 J3KRW8 73 aa4.5□□□□□ -1.69
CPSF2-205ENST00000556622 M0QY20 66 aa4.5□□□□□ -1.69
CPSF2-205ENST00000556622 M0R2P5 195 aa4.5□□□□□ -1.69
CPSF2-205ENST00000556622 APOMO95445 188 aa4.5□□□□□ -1.69
CPSF2-205ENST00000556622 IGHV4-59P01825 116 aa4.5□□□□□ -1.69
CPSF2-205ENST00000556622 IFITM1P13164 125 aa4.5□□□□□ -1.69
CPSF2-205ENST00000556622 BLCAPP62952 87 aa4.5□□□□□ -1.69
CPSF2-205ENST00000556622 C20orf203Q8NBC4 194 aa4.5□□□□□ -1.69
CPSF2-205ENST00000556622 CUBNO60494 3623 aa4.5□□□□□ -1.69
CPSF2-205ENST00000556622 STAB1Q9NY15 2570 aa4.49□□□□□ -1.69
CPSF2-205ENST00000556622 LOC107984156A0A0G2JMH3 177 aa4.49□□□□□ -1.69
CPSF2-205ENST00000556622 A0A0J9YXY3 114 aa4.49□□□□□ -1.69
CPSF2-205ENST00000556622 A0A0J9YY99 117 aa4.49□□□□□ -1.69
CPSF2-205ENST00000556622 TIMM17BO60830 172 aa4.49□□□□□ -1.69
CPSF2-205ENST00000556622 UBE2D1P51668 147 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms