RNA–Protein interactions for RNA: ENST00000556591.1

CFAP54-208, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 5

Gene CFAP54, Length 802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-208ENST00000556591 BCE1O60756 84 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 NDUFB6O95139 128 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 SIX6O95475 246 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 IFNA17P01571 189 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 SPRR1AP35321 89 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 CCL18P55774 89 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 DEFB109BQ30KR1 87 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 BAGE3Q86Y29 109 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 SMIM3Q9BZL3 60 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 LINC00472Q9H8W2 130 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 GSKIPQ9P0R6 139 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 PRO0255Q9UI72 69 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 LRRC37A3O60309 1634 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 PLCE1Q9P212 2302 aa-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 KMT2CQ8NEZ4 4911 aaKnown RBP-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 MAP1BP46821 2468 aaKnown RBP-0.4□□□□□ -2.47
CFAP54-208ENST00000556591 IFT140Q96RY7 1462 aa-0.41□□□□□ -2.47
CFAP54-208ENST00000556591 CEP152O94986 1710 aa-0.41□□□□□ -2.47
CFAP54-208ENST00000556591 FLNBO75369 2602 aaKnown RBP-0.41□□□□□ -2.47
CFAP54-208ENST00000556591 KDM3BQ7LBC6 1761 aa-0.41□□□□□ -2.47
CFAP54-208ENST00000556591 LRP1BQ9NZR2 4599 aa-0.41□□□□□ -2.48
CFAP54-208ENST00000556591 M0R2Z0 102 aa-0.41□□□□□ -2.48
CFAP54-208ENST00000556591 IL5P05113 134 aa-0.41□□□□□ -2.48
CFAP54-208ENST00000556591 RRAS2P62070 204 aaPredicted RBP-0.41□□□□□ -2.48
CFAP54-208ENST00000556591 SPTSSBQ8NFR3 76 aa-0.41□□□□□ -2.48
CFAP54-208ENST00000556591 FHAD1B1AJZ9 1412 aa-0.41□□□□□ -2.48
CFAP54-208ENST00000556591 CASKIN1Q8WXD9 1431 aa-0.41□□□□□ -2.48
CFAP54-208ENST00000556591 WNK3Q9BYP7 1800 aa-0.41□□□□□ -2.48
CFAP54-208ENST00000556591 USF3Q68DE3 2245 aa-0.41□□□□□ -2.48
CFAP54-208ENST00000556591 SPTBN1Q01082 2364 aaKnown RBP-0.41□□□□□ -2.48
CFAP54-208ENST00000556591 APC2O95996 2303 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 A6NIN4 97 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 HCG22E2RYF7 251 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 J3QR89 54 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 PIPP12273 146 aaPredicted RBP-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 GUCA1AP43080 201 aaPredicted RBP-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 RPS25P62851 125 aaKnown RBP-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 SMIM21Q3B7S5 101 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 CFAP126Q5VTH2 177 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 ANP32BQ92688 251 aaKnown RBP-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 SPTSSAQ969W0 71 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 AGPAT4-IT1Q9H0P7 198 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 SCN3BQ9NY72 215 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 ZNF609O15014 1411 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 STAB2Q8WWQ8 2551 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 DOPEY1Q5JWR5 2465 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 ZNF518AQ6AHZ1 1483 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 LRP6O75581 1613 aa-0.42□□□□□ -2.48
CFAP54-208ENST00000556591 CHD8Q9HCK8 2581 aa-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 PRDM2Q13029 1718 aa-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 WNK1Q9H4A3 2382 aa-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 K7ERU9 68 aa-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 SPRR2BP35325 72 aa-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 RPL7L1Q6DKI1 246 aaKnown RBP-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 Q8IZM0 81 aa-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 LSM10Q969L4 123 aaKnown RBP-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 AMELXQ99217 191 aa-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 PSMG3Q9BT73 122 aaPredicted RBP-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 TMEM191AQ9H0A3 160 aa-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 MYH8P13535 1937 aa-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 BCL9LQ86UU0 1499 aa-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 ZNF236Q9UL36 1845 aa-0.43□□□□□ -2.48
CFAP54-208ENST00000556591 C10orf71Q711Q0 1435 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 CSPG4Q6UVK1 2322 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 M0R135 149 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 PPP1R17O96001 155 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 COPZ1P61923 177 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 HAMPP81172 84 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 SPAG11BQ08648 103 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 KRTAP19-7Q3SYF9 63 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 S100A7L2Q5SY68 101 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 Q8N8P6 123 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 MRC1P22897 1456 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 DOCK1Q14185 1865 aa-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 FLGP20930 4061 aaPredicted RBP-0.44□□□□□ -2.48
CFAP54-208ENST00000556591 SPTA1P02549 2419 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 ACANP16112 2415 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 TRAV22A0A0B4J277 110 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 FAM92AA1XBS5 289 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 SNCGO76070 127 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 MYO7BQ6PIF6 2116 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 KCNRGQ8N5I3 272 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 TSTD1Q8NFU3 115 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 MAFIPQ8WZ33 124 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 SEC11CQ9BY50 192 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 TP53AIP1Q9HCN2 124 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 COPZ2Q9P299 210 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 SPCS1Q9Y6A9 102 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 R4GMQ9 66 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 PATJQ8NI35 1801 aa-0.45□□□□□ -2.48
CFAP54-208ENST00000556591 EP300Q09472 2414 aaPredicted RBP-0.46□□□□□ -2.48
CFAP54-208ENST00000556591 GRIN2AQ12879 1464 aa-0.46□□□□□ -2.48
CFAP54-208ENST00000556591 LRRC37A2A6NM11 1700 aa-0.46□□□□□ -2.48
CFAP54-208ENST00000556591 ZFHX3Q15911 3703 aa-0.46□□□□□ -2.48
CFAP54-208ENST00000556591 TRAV13-2A0A0B4J235 113 aa-0.46□□□□□ -2.48
CFAP54-208ENST00000556591 HIST1H1DP16402 221 aaKnown RBP-0.46□□□□□ -2.48
CFAP54-208ENST00000556591 CCDC167Q9P0B6 97 aa-0.46□□□□□ -2.48
CFAP54-208ENST00000556591 LENEPQ9Y5L5 61 aa-0.46□□□□□ -2.48
CFAP54-208ENST00000556591 NWD2Q9ULI1 1742 aa-0.47□□□□□ -2.48
CFAP54-208ENST00000556591 PI4KAP42356 2102 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms