RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 IGHV3OR16-12A0A075B7B8 117 aa4.3□□□□□ -1.72
TDP1-215ENST00000556498 LY6G6EA0A0G2JKS1 128 aa4.3□□□□□ -1.72
TDP1-215ENST00000556498 PATE4P0C8F1 98 aa4.3□□□□□ -1.72
TDP1-215ENST00000556498 MOBPQ13875 183 aa4.3□□□□□ -1.72
TDP1-215ENST00000556498 C17orf82Q86X59 251 aaPredicted RBP4.3□□□□□ -1.72
TDP1-215ENST00000556498 C14orf178Q8N769 122 aaPredicted RBP4.3□□□□□ -1.72
TDP1-215ENST00000556498 SMIM2Q9BVW6 85 aa4.3□□□□□ -1.72
TDP1-215ENST00000556498 C22orf24Q9Y442 160 aa4.3□□□□□ -1.72
TDP1-215ENST00000556498 IGKV1-6A0A0C4DH72 117 aa4.29□□□□□ -1.72
TDP1-215ENST00000556498 IGLV5-39A0A0G2JS06 123 aa4.29□□□□□ -1.72
TDP1-215ENST00000556498 CXorf51AA0A1B0GTR3 108 aa4.29□□□□□ -1.72
TDP1-215ENST00000556498 IGLV2-11P01706 119 aa4.29□□□□□ -1.72
TDP1-215ENST00000556498 C2orf83Q53S99 150 aa4.29□□□□□ -1.72
TDP1-215ENST00000556498 SND1-IT1Q9HBX3 110 aa4.29□□□□□ -1.72
TDP1-215ENST00000556498 DYSFO75923 2080 aa4.29□□□□□ -1.72
TDP1-215ENST00000556498 COL5A1P20908 1838 aaPredicted RBP4.28□□□□□ -1.72
TDP1-215ENST00000556498 C2orf16Q68DN1 1984 aa4.28□□□□□ -1.72
TDP1-215ENST00000556498 IGHV1OR15-1A0A075B7D0 117 aa4.28□□□□□ -1.72
TDP1-215ENST00000556498 IGKV3D-20A0A0C4DH25 116 aa4.28□□□□□ -1.72
TDP1-215ENST00000556498 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
TDP1-215ENST00000556498 Q9BRP9 147 aa4.28□□□□□ -1.72
TDP1-215ENST00000556498 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
TDP1-215ENST00000556498 C14orf132Q9NPU4 83 aa4.28□□□□□ -1.72
TDP1-215ENST00000556498 TCF20Q9UGU0 1960 aaKnown RBP4.27□□□□□ -1.73
TDP1-215ENST00000556498 MDC1Q14676 2089 aaKnown RBP4.27□□□□□ -1.73
TDP1-215ENST00000556498 IGLV4-69A0A075B6H9 119 aa4.27□□□□□ -1.73
TDP1-215ENST00000556498 IGLV9-49A0A0B4J1Y8 123 aa4.27□□□□□ -1.73
TDP1-215ENST00000556498 TRAV12-3A0A0B4J271 114 aa4.27□□□□□ -1.73
TDP1-215ENST00000556498 C17orf98A8MV24 154 aa4.27□□□□□ -1.73
TDP1-215ENST00000556498 IGHV1-69P01742 117 aa4.27□□□□□ -1.73
TDP1-215ENST00000556498 IGHV3-48P01763 117 aa4.27□□□□□ -1.73
TDP1-215ENST00000556498 TSPEAR-AS2P59090 65 aa4.27□□□□□ -1.73
TDP1-215ENST00000556498 PIGYQ3MUY2 71 aa4.27□□□□□ -1.73
TDP1-215ENST00000556498 C2orf66Q6UXQ4 117 aa4.27□□□□□ -1.73
TDP1-215ENST00000556498 Q8N814 137 aa4.27□□□□□ -1.73
TDP1-215ENST00000556498 Q8N9P0 234 aaPredicted RBP4.27□□□□□ -1.73
TDP1-215ENST00000556498 ORMDL1Q9P0S3 153 aa4.27□□□□□ -1.73
TDP1-215ENST00000556498 IGHV4-4A0A075B6R2 117 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 TRAV10A0A0B4J240 114 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 TRAV21A0A0B4J279 112 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 IGHV3-35A0A0C4DH35 117 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 BPY2O14599 106 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 IGLV1-51P01701 117 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 IGLV3-19P01714 112 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 GNLYP22749 145 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 IGLV3-21P80748 117 aaPredicted RBP4.26□□□□□ -1.73
TDP1-215ENST00000556498 RPL36AP83881 106 aaKnown RBP4.26□□□□□ -1.73
TDP1-215ENST00000556498 ODF3L2Q3SX64 289 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 Q6ZS52 159 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 LITAFQ99732 161 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 PRR15LQ9BU68 103 aa4.26□□□□□ -1.73
TDP1-215ENST00000556498 LCE6AA0A183 80 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 PINLYPA6NC86 204 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 C10orf142B7Z368 130 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 LY6G6DO95868 133 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 LHBP01229 141 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 CTSGP08311 255 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 IGHV1-2P23083 117 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 LINC01547P58512 204 aaPredicted RBP4.25□□□□□ -1.73
TDP1-215ENST00000556498 REG3AQ06141 175 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 SRCAPQ6ZRS2 3230 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 FAM218AQ96MZ4 157 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 B9D2Q9BPU9 175 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 KIF26BQ2KJY2 2108 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 HEATR1Q9H583 2144 aaKnown RBP4.25□□□□□ -1.73
TDP1-215ENST00000556498 TANC2Q9HCD6 1990 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 GON4LQ3T8J9 2241 aa4.25□□□□□ -1.73
TDP1-215ENST00000556498 IGHV7-81A0A0B4J1V7 117 aa4.24□□□□□ -1.73
TDP1-215ENST00000556498 LY6HO94772 140 aa4.24□□□□□ -1.73
TDP1-215ENST00000556498 S4R3C0 116 aa4.24□□□□□ -1.73
TDP1-215ENST00000556498 EML5Q05BV3 1969 aa4.23□□□□□ -1.73
TDP1-215ENST00000556498 LOC110117498A0A087WWA1 95 aa4.23□□□□□ -1.73
TDP1-215ENST00000556498 IGHV3-20A0A0C4DH32 117 aa4.23□□□□□ -1.73
TDP1-215ENST00000556498 TRBV6-5A0A0K0K1A5 114 aa4.23□□□□□ -1.73
TDP1-215ENST00000556498 SPANXA2-OT1Q8N9U9 137 aa4.23□□□□□ -1.73
TDP1-215ENST00000556498 FAM104AQ969W3 186 aa4.23□□□□□ -1.73
TDP1-215ENST00000556498 OCR1Q9BZK8 76 aa4.23□□□□□ -1.73
TDP1-215ENST00000556498 MYO7AQ13402 2215 aa4.23□□□□□ -1.73
TDP1-215ENST00000556498 TET1Q8NFU7 2136 aa4.22□□□□□ -1.73
TDP1-215ENST00000556498 K7EQD1 137 aa4.22□□□□□ -1.73
TDP1-215ENST00000556498 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
TDP1-215ENST00000556498 CCL3P10147 92 aa4.22□□□□□ -1.73
TDP1-215ENST00000556498 DEFB114Q30KQ6 69 aa4.22□□□□□ -1.73
TDP1-215ENST00000556498 ZFAND2AQ8N6M9 145 aa4.22□□□□□ -1.73
TDP1-215ENST00000556498 CNEP1R1Q8N9A8 125 aa4.22□□□□□ -1.73
TDP1-215ENST00000556498 ZNF625Q96I27 306 aaPredicted RBP4.22□□□□□ -1.73
TDP1-215ENST00000556498 KRTAP4-5Q9BYR2 181 aa4.22□□□□□ -1.73
TDP1-215ENST00000556498 PRO3102Q9H379 93 aa4.22□□□□□ -1.73
TDP1-215ENST00000556498 NDUFA4L2Q9NRX3 87 aa4.22□□□□□ -1.73
TDP1-215ENST00000556498 MYOFQ9NZM1 2061 aa4.22□□□□□ -1.73
TDP1-215ENST00000556498 ARID1AO14497 2285 aa4.21□□□□□ -1.73
TDP1-215ENST00000556498 CRPP02741 224 aa4.21□□□□□ -1.74
TDP1-215ENST00000556498 MSMBP08118 114 aa4.21□□□□□ -1.74
TDP1-215ENST00000556498 PRB4P10163 310 aaPredicted RBP4.21□□□□□ -1.74
TDP1-215ENST00000556498 CRIP1P50238 77 aa4.21□□□□□ -1.74
TDP1-215ENST00000556498 ROMO1P60602 79 aa4.21□□□□□ -1.74
TDP1-215ENST00000556498 ERHP84090 104 aaKnown RBP4.21□□□□□ -1.74
TDP1-215ENST00000556498 PRCDQ00LT1 54 aa4.21□□□□□ -1.74
TDP1-215ENST00000556498 C1orf134Q5TEV5 83 aa4.21□□□□□ -1.74
TDP1-215ENST00000556498 C20orf203Q8NBC4 194 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms