RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TCTEX1D4Q5JR98 221 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 GDF5OSQ5U4N7 250 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 SPANXN1Q5VSR9 72 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 SCGB1D4Q6XE38 83 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 FOXI2Q6ZQN5 318 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 FA2HQ7L5A8 372 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 TMEM61Q8N0U2 210 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 ZFAND2AQ8N6M9 145 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 ZNRF2Q8NHG8 242 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 DYNLRB2Q8TF09 96 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 TP53TG3Q9ULZ0 132 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 NBEAQ8NFP9 2946 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 KALRNO60229 2985 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 LRBAP50851 2863 aa3.65□□□□□ -1.83
SRP54-211ENST00000556445 FLNCQ14315 2725 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 IGKV3-7A0A075B6H7 116 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 IGKV3D-20A0A0C4DH25 116 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 A0A0J9YX75 114 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 FAM236DA0A1B0GTK5 79 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 C20orf202A1L168 122 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 PLAC8L1A1L4L8 177 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 KLLNB2CW77 178 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 M0R2Z0 102 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 FAM236CP0DP71 79 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 CKS2P33552 79 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 DAD1P61803 113 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 PKIAP61925 76 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 PMCHL1Q16048 86 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 BATFQ16520 125 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 PSMG4Q5JS54 123 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 C10orf99Q6UWK7 81 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 DEFB125Q8N687 156 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 KLHL30-AS1Q8NEE0 82 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 DNAJC30Q96LL9 226 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 PRELID3AQ96N28 172 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 NXT2Q9NPJ8 142 aaKnown RBP3.64□□□□□ -1.83
SRP54-211ENST00000556445 RBM12B-AS1Q9P1G2 102 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 HSPB8Q9UJY1 196 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 U3KQK5 164 aa3.64□□□□□ -1.83
SRP54-211ENST00000556445 KMT2BQ9UMN6 2715 aaPredicted RBP3.63□□□□□ -1.83
SRP54-211ENST00000556445 TRAV8-3A0A0A6YYJ7 113 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 IGHV6-1A0A0B4J1U7 121 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 A0A1B0GV90 55 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 C7orf71A4D174 169 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 LINC01549A6NIU2 74 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 TCF21O43680 179 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 NUPR1O60356 82 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 LEPROTL1O95214 131 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 ZNF688P0C7X2 276 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 CHTF8P0CG12 524 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 ZNF705DP0CH99 300 aaPredicted RBP3.63□□□□□ -1.83
SRP54-211ENST00000556445 ZNF705BP0CI00 300 aaPredicted RBP3.63□□□□□ -1.83
SRP54-211ENST00000556445 RNASE4P34096 147 aaKnown RBP3.63□□□□□ -1.83
SRP54-211ENST00000556445 MRPL51Q4U2R6 128 aaKnown RBP3.63□□□□□ -1.83
SRP54-211ENST00000556445 FAM222AQ5U5X8 452 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 AMN1Q8IY45 258 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 OR10AG1Q8NH19 301 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 DPH3P1Q9H4G8 78 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 JPT2Q9H910 190 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 PHLDA3Q9Y5J5 127 aa3.63□□□□□ -1.83
SRP54-211ENST00000556445 LOC389332A0A1B0GUA5 103 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 A8MTW9 85 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 D6R8Y8 96 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 K7EMI3 77 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 K7EP13 123 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 M0R381 172 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 SMIM17P0DL12 118 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 HLA-DRB4P13762 266 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 KRTDAPP60985 99 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 DEFB114Q30KQ6 69 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 TDRG1Q3Y452 100 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 LINC01006Q8NI28 216 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 AP1S3Q96PC3 154 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 C2orf88Q9BSF0 95 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 CHCHD5Q9BSY4 110 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 TMEM243Q9BU79 118 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 TMEM70Q9BUB7 260 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 VAMP8Q9BV40 100 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 DHRS4-AS1Q9P1J3 65 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 HLA-DRB4X5D2U9 266 aa3.62□□□□□ -1.83
SRP54-211ENST00000556445 LINC01546A6NGU7 62 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 KRTAP4-16G5E9R7 235 aaPredicted RBP3.61□□□□□ -1.83
SRP54-211ENST00000556445 H3BVH4 76 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 LY6G6DO95868 133 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 CD7P09564 240 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 C3orf79P0CE67 100 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 FGF6P10767 208 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 DEFB131AP59861 70 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 RBMY1FQ15415 496 aaKnown RBP3.61□□□□□ -1.83
SRP54-211ENST00000556445 CASC10Q5T4H9 136 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 ZC2HC1BQ5TFG8 222 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 Q6ZRU5 148 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 NDUFA11Q86Y39 141 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 FAM19A2Q8N3H0 131 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 LINC01587Q99440 93 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 C20orf78Q9BR46 151 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 POLQO75417 2590 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 ABCA12Q86UK0 2595 aa3.61□□□□□ -1.83
SRP54-211ENST00000556445 DCHS2Q6V1P9 2916 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 IGHV1-24A0A0C4DH33 117 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms