RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 UBE2L6O14933 153 aa13.62□□□□□ -0.23
RCCD1-205ENST00000556333 CHCHD7Q9BUK0 85 aa13.62□□□□□ -0.23
RCCD1-205ENST00000556333 KLK12Q9UKR0 248 aa13.62□□□□□ -0.23
RCCD1-205ENST00000556333 RYR1P21817 5038 aa13.61□□□□□ -0.23
RCCD1-205ENST00000556333 SNAPINO95295 136 aa13.61□□□□□ -0.23
RCCD1-205ENST00000556333 ELOBQ15370 118 aa13.61□□□□□ -0.23
RCCD1-205ENST00000556333 MPV17L2Q567V2 206 aa13.61□□□□□ -0.23
RCCD1-205ENST00000556333 SVBPQ8N300 66 aa13.61□□□□□ -0.23
RCCD1-205ENST00000556333 TMEM70Q9BUB7 260 aa13.61□□□□□ -0.23
RCCD1-205ENST00000556333 TMEM242Q9NWH2 141 aa13.61□□□□□ -0.23
RCCD1-205ENST00000556333 D6R8Y8 96 aa13.6□□□□□ -0.23
RCCD1-205ENST00000556333 APCSP02743 223 aa13.6□□□□□ -0.23
RCCD1-205ENST00000556333 TNP2Q05952 138 aa13.6□□□□□ -0.23
RCCD1-205ENST00000556333 ATRAIDQ6UW56 229 aa13.6□□□□□ -0.23
RCCD1-205ENST00000556333 SLC7A5P1Q8MH63 180 aa13.6□□□□□ -0.23
RCCD1-205ENST00000556333 NRACQ8N912 160 aa13.6□□□□□ -0.23
RCCD1-205ENST00000556333 TRAV9-1A0A075B6T8 112 aa13.59□□□□□ -0.23
RCCD1-205ENST00000556333 ANGP03950 147 aaKnown RBP13.59□□□□□ -0.23
RCCD1-205ENST00000556333 SUMO2P61956 95 aaKnown RBP13.59□□□□□ -0.23
RCCD1-205ENST00000556333 LAGE3Q14657 143 aa13.59□□□□□ -0.23
RCCD1-205ENST00000556333 PSCAO43653 123 aa13.58□□□□□ -0.24
RCCD1-205ENST00000556333 PPBPP02775 128 aa13.58□□□□□ -0.24
RCCD1-205ENST00000556333 POLR2KP53803 58 aaKnown RBP13.58□□□□□ -0.24
RCCD1-205ENST00000556333 Q8N976 141 aa13.58□□□□□ -0.24
RCCD1-205ENST00000556333 TRAV8-3A0A0A6YYJ7 113 aa13.57□□□□□ -0.24
RCCD1-205ENST00000556333 VCYO14598 125 aa13.57□□□□□ -0.24
RCCD1-205ENST00000556333 TNFRSF6BO95407 300 aa13.57□□□□□ -0.24
RCCD1-205ENST00000556333 Q6ZRN7 208 aaPredicted RBP13.57□□□□□ -0.24
RCCD1-205ENST00000556333 ORMDL3Q8N138 153 aa13.57□□□□□ -0.24
RCCD1-205ENST00000556333 CRPP02741 224 aa13.56□□□□□ -0.24
RCCD1-205ENST00000556333 TMEM136Q6ZRR5 245 aa13.56□□□□□ -0.24
RCCD1-205ENST00000556333 UBE2WQ96B02 151 aa13.56□□□□□ -0.24
RCCD1-205ENST00000556333 TRBV27A0A0K0K1C4 114 aa13.55□□□□□ -0.24
RCCD1-205ENST00000556333 NPYP01303 97 aa13.55□□□□□ -0.24
RCCD1-205ENST00000556333 FCER1GP30273 86 aa13.55□□□□□ -0.24
RCCD1-205ENST00000556333 RBX1P62877 108 aa13.55□□□□□ -0.24
RCCD1-205ENST00000556333 PRELID3AQ96N28 172 aa13.55□□□□□ -0.24
RCCD1-205ENST00000556333 KIR2DL4Q99706 377 aa13.55□□□□□ -0.24
RCCD1-205ENST00000556333 C20orf78Q9BR46 151 aa13.55□□□□□ -0.24
RCCD1-205ENST00000556333 TRBV24-1A0A075B6N3 115 aa13.54□□□□□ -0.24
RCCD1-205ENST00000556333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.54□□□□□ -0.24
RCCD1-205ENST00000556333 IGKV2-29A2NJV5 120 aaPredicted RBP13.54□□□□□ -0.24
RCCD1-205ENST00000556333 TSHBP01222 138 aa13.54□□□□□ -0.24
RCCD1-205ENST00000556333 AMMECR1LQ6DCA0 310 aa13.54□□□□□ -0.24
RCCD1-205ENST00000556333 Q0VG73 95 aa13.53□□□□□ -0.24
RCCD1-205ENST00000556333 CLPSL2Q6UWE3 100 aa13.53□□□□□ -0.24
RCCD1-205ENST00000556333 RMI2Q96E14 147 aa13.53□□□□□ -0.24
RCCD1-205ENST00000556333 TM2D2Q9BX73 214 aa13.53□□□□□ -0.24
RCCD1-205ENST00000556333 DNAH10Q8IVF4 4471 aa13.52□□□□□ -0.24
RCCD1-205ENST00000556333 IGKV2D-24A0A075B6R9 120 aa13.52□□□□□ -0.25
RCCD1-205ENST00000556333 PHOX2AO14813 284 aa13.52□□□□□ -0.25
RCCD1-205ENST00000556333 RNASEKQ6P5S7 137 aaKnown RBP13.52□□□□□ -0.25
RCCD1-205ENST00000556333 A0A1B0GUV1 79 aa13.51□□□□□ -0.25
RCCD1-205ENST00000556333 LINC00269Q8N2A0 174 aa13.51□□□□□ -0.25
RCCD1-205ENST00000556333 SMIM2Q9BVW6 85 aa13.51□□□□□ -0.25
RCCD1-205ENST00000556333 DNAH2Q9P225 4427 aa13.51□□□□□ -0.25
RCCD1-205ENST00000556333 IGLV4-60A0A075B6I1 120 aa13.5□□□□□ -0.25
RCCD1-205ENST00000556333 A0A1B0GVY2 172 aa13.5□□□□□ -0.25
RCCD1-205ENST00000556333 H7C423 109 aa13.5□□□□□ -0.25
RCCD1-205ENST00000556333 EREGO14944 169 aa13.5□□□□□ -0.25
RCCD1-205ENST00000556333 HLA-DQA1P01909 254 aa13.5□□□□□ -0.25
RCCD1-205ENST00000556333 COX19Q49B96 90 aa13.5□□□□□ -0.25
RCCD1-205ENST00000556333 ENHOQ6UWT2 76 aa13.5□□□□□ -0.25
RCCD1-205ENST00000556333 KIAA1109Q2LD37 5005 aa13.49□□□□□ -0.25
RCCD1-205ENST00000556333 HECTD4Q9Y4D8 3996 aa13.49□□□□□ -0.25
RCCD1-205ENST00000556333 RPL32P62910 135 aaKnown RBP13.49□□□□□ -0.25
RCCD1-205ENST00000556333 KIAA1644Q3SXP7 199 aa13.49□□□□□ -0.25
RCCD1-205ENST00000556333 C20orf203Q8NBC4 194 aa13.49□□□□□ -0.25
RCCD1-205ENST00000556333 C1orf43Q9BWL3 253 aa13.49□□□□□ -0.25
RCCD1-205ENST00000556333 GNB1LQ9BYB4 327 aa13.49□□□□□ -0.25
RCCD1-205ENST00000556333 MAP1LC3AQ9H492 121 aa13.49□□□□□ -0.25
RCCD1-205ENST00000556333 LAMTOR2Q9Y2Q5 125 aa13.49□□□□□ -0.25
RCCD1-205ENST00000556333 COX11Q9Y6N1 276 aa13.49□□□□□ -0.25
RCCD1-205ENST00000556333 TGIF2-C20orf24A0A0A6YYL0 155 aa13.48□□□□□ -0.25
RCCD1-205ENST00000556333 LOC389332A0A1B0GUA5 103 aa13.48□□□□□ -0.25
RCCD1-205ENST00000556333 FGF6P10767 208 aa13.48□□□□□ -0.25
RCCD1-205ENST00000556333 ESDP10768 282 aa13.48□□□□□ -0.25
RCCD1-205ENST00000556333 REG3AQ06141 175 aa13.48□□□□□ -0.25
RCCD1-205ENST00000556333 TMEM101Q96IK0 257 aa13.48□□□□□ -0.25
RCCD1-205ENST00000556333 TCAPO15273 167 aa13.47□□□□□ -0.25
RCCD1-205ENST00000556333 IGKV3OR2-268A0A0C4DH90 116 aa13.46□□□□□ -0.25
RCCD1-205ENST00000556333 RAB5AP20339 215 aa13.46□□□□□ -0.25
RCCD1-205ENST00000556333 MIAQ16674 131 aa13.46□□□□□ -0.25
RCCD1-205ENST00000556333 A0A087WTM6 91 aa13.45□□□□□ -0.26
RCCD1-205ENST00000556333 MT-ND6P03923 174 aa13.45□□□□□ -0.26
RCCD1-205ENST00000556333 ZNF25P17030 456 aaPredicted RBP13.45□□□□□ -0.26
RCCD1-205ENST00000556333 SPATA12Q7Z6I5 190 aa13.45□□□□□ -0.26
RCCD1-205ENST00000556333 TMEM18Q96B42 140 aa13.45□□□□□ -0.26
RCCD1-205ENST00000556333 PRR34Q9NV39 138 aa13.45□□□□□ -0.26
RCCD1-205ENST00000556333 SMAGPQ0VAQ4 97 aa13.44□□□□□ -0.26
RCCD1-205ENST00000556333 DGAT2L7PQ6IED9 249 aa13.44□□□□□ -0.26
RCCD1-205ENST00000556333 OR5A1Q8NGJ0 315 aa13.44□□□□□ -0.26
RCCD1-205ENST00000556333 MRPL18Q9H0U6 180 aaKnown RBP13.44□□□□□ -0.26
RCCD1-205ENST00000556333 DNAH17Q9UFH2 4485 aa13.44□□□□□ -0.26
RCCD1-205ENST00000556333 IGLV10-54A0A075B6I4 117 aa13.43□□□□□ -0.26
RCCD1-205ENST00000556333 FABP9Q0Z7S8 132 aa13.43□□□□□ -0.26
RCCD1-205ENST00000556333 PRSS47A8MTI9 375 aa13.42□□□□□ -0.26
RCCD1-205ENST00000556333 TRAPPC1Q9Y5R8 145 aa13.42□□□□□ -0.26
RCCD1-205ENST00000556333 LRCOL1A6NCL2 159 aa13.41□□□□□ -0.26
RCCD1-205ENST00000556333 LECT2O14960 151 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms