RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 V9GYV3 84 aa7.68□□□□□ -1.18
SLIRP-205ENST00000556310 IGHV1-24A0A0C4DH33 117 aa7.67□□□□□ -1.18
SLIRP-205ENST00000556310 A0A1B0GUT8 65 aa7.67□□□□□ -1.18
SLIRP-205ENST00000556310 TMEM262E9PQX1 116 aa7.67□□□□□ -1.18
SLIRP-205ENST00000556310 GATD1Q8NB37 220 aa7.67□□□□□ -1.18
SLIRP-205ENST00000556310 UBE2WQ96B02 151 aa7.67□□□□□ -1.18
SLIRP-205ENST00000556310 TRAV26-2A0A0B4J265 109 aa7.66□□□□□ -1.18
SLIRP-205ENST00000556310 FUSP35637 526 aaKnown RBP eCLIP7.66□□□□□ -1.18
SLIRP-205ENST00000556310 Q0VG73 95 aa7.66□□□□□ -1.18
SLIRP-205ENST00000556310 ATRAIDQ6UW56 229 aa7.66□□□□□ -1.18
SLIRP-205ENST00000556310 Q8N814 137 aa7.66□□□□□ -1.18
SLIRP-205ENST00000556310 NTN5Q8WTR8 489 aaPredicted RBP7.66□□□□□ -1.18
SLIRP-205ENST00000556310 IGKV2D-24A0A075B6R9 120 aa7.65□□□□□ -1.18
SLIRP-205ENST00000556310 CRPP02741 224 aa7.65□□□□□ -1.18
SLIRP-205ENST00000556310 ANGP03950 147 aaKnown RBP7.65□□□□□ -1.18
SLIRP-205ENST00000556310 RAB14P61106 215 aa7.65□□□□□ -1.18
SLIRP-205ENST00000556310 GAGE6Q13070 117 aa7.65□□□□□ -1.18
SLIRP-205ENST00000556310 Q8N976 141 aa7.65□□□□□ -1.18
SLIRP-205ENST00000556310 RBX1P62877 108 aa7.64□□□□□ -1.19
SLIRP-205ENST00000556310 RIGQ13278 110 aa7.64□□□□□ -1.19
SLIRP-205ENST00000556310 COTL1Q14019 142 aa7.64□□□□□ -1.19
SLIRP-205ENST00000556310 WFDC2Q14508 124 aa7.64□□□□□ -1.19
SLIRP-205ENST00000556310 NUP35Q8NFH5 326 aa7.64□□□□□ -1.19
SLIRP-205ENST00000556310 RPL39LQ96EH5 51 aaKnown RBP7.64□□□□□ -1.19
SLIRP-205ENST00000556310 TMEM243Q9BU79 118 aa7.64□□□□□ -1.19
SLIRP-205ENST00000556310 C1orf43Q9BWL3 253 aa7.64□□□□□ -1.19
SLIRP-205ENST00000556310 TMEM191AQ9H0A3 160 aa7.64□□□□□ -1.19
SLIRP-205ENST00000556310 NAT8BQ9UHF3 227 aa7.64□□□□□ -1.19
SLIRP-205ENST00000556310 PCLOQ9Y6V0 5065 aa7.64□□□□□ -1.19
SLIRP-205ENST00000556310 IGLV5-52A0A0A0MRZ9 124 aa7.63□□□□□ -1.19
SLIRP-205ENST00000556310 AMTP48728 403 aa7.63□□□□□ -1.19
SLIRP-205ENST00000556310 MIAQ16674 131 aa7.63□□□□□ -1.19
SLIRP-205ENST00000556310 ENHOQ6UWT2 76 aa7.63□□□□□ -1.19
SLIRP-205ENST00000556310 MAPKAPK5-AS1Q8N8E1 139 aa7.63□□□□□ -1.19
SLIRP-205ENST00000556310 PRR34Q9NV39 138 aa7.63□□□□□ -1.19
SLIRP-205ENST00000556310 TRBV6-5A0A0K0K1A5 114 aa7.62□□□□□ -1.19
SLIRP-205ENST00000556310 SMIM27A0A1W2PRY6 76 aa7.62□□□□□ -1.19
SLIRP-205ENST00000556310 SDHAF1A6NFY7 115 aa7.62□□□□□ -1.19
SLIRP-205ENST00000556310 NCR2O95944 276 aa7.62□□□□□ -1.19
SLIRP-205ENST00000556310 GCSHP23434 173 aa7.62□□□□□ -1.19
SLIRP-205ENST00000556310 A0A1B0GUV1 79 aa7.61□□□□□ -1.19
SLIRP-205ENST00000556310 UBE2L6O14933 153 aa7.61□□□□□ -1.19
SLIRP-205ENST00000556310 LECT2O14960 151 aa7.61□□□□□ -1.19
SLIRP-205ENST00000556310 KRTAP10-1P60331 282 aa7.61□□□□□ -1.19
SLIRP-205ENST00000556310 CLLU1Q5K131 121 aa7.61□□□□□ -1.19
SLIRP-205ENST00000556310 AMN1Q8IY45 258 aa7.61□□□□□ -1.19
SLIRP-205ENST00000556310 LINC00269Q8N2A0 174 aa7.61□□□□□ -1.19
SLIRP-205ENST00000556310 BAALCQ8WXS3 180 aa7.61□□□□□ -1.19
SLIRP-205ENST00000556310 MRAP2Q96G30 205 aa7.61□□□□□ -1.19
SLIRP-205ENST00000556310 RNF185Q96GF1 192 aa7.61□□□□□ -1.19
SLIRP-205ENST00000556310 ABCA13Q86UQ4 5058 aa7.61□□□□□ -1.19
SLIRP-205ENST00000556310 DNAH8Q96JB1 4490 aa7.6□□□□□ -1.19
SLIRP-205ENST00000556310 A0A1B0GW15 77 aa7.6□□□□□ -1.19
SLIRP-205ENST00000556310 APCSP02743 223 aa7.6□□□□□ -1.19
SLIRP-205ENST00000556310 RAB4AP20338 218 aa7.6□□□□□ -1.19
SLIRP-205ENST00000556310 CLPSL2Q6UWE3 100 aa7.6□□□□□ -1.19
SLIRP-205ENST00000556310 C20orf203Q8NBC4 194 aa7.6□□□□□ -1.19
SLIRP-205ENST00000556310 CLRN3Q8NCR9 226 aa7.6□□□□□ -1.19
SLIRP-205ENST00000556310 DEFB104AQ8WTQ1 72 aa7.6□□□□□ -1.19
SLIRP-205ENST00000556310 I3L3M4 83 aa7.59□□□□□ -1.19
SLIRP-205ENST00000556310 GAS8-AS1O95177 125 aa7.59□□□□□ -1.19
SLIRP-205ENST00000556310 REG3AQ06141 175 aa7.59□□□□□ -1.19
SLIRP-205ENST00000556310 PNRC1Q12796 327 aaPredicted RBP7.59□□□□□ -1.19
SLIRP-205ENST00000556310 TMEM70Q9BUB7 260 aa7.59□□□□□ -1.19
SLIRP-205ENST00000556310 ST20Q9HBF5 79 aa7.59□□□□□ -1.19
SLIRP-205ENST00000556310 IGLV4-60A0A075B6I1 120 aa7.58□□□□□ -1.2
SLIRP-205ENST00000556310 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.58□□□□□ -1.2
SLIRP-205ENST00000556310 H7C423 109 aa7.58□□□□□ -1.2
SLIRP-205ENST00000556310 PPP1R2P9O14990 202 aa7.58□□□□□ -1.2
SLIRP-205ENST00000556310 PPP1R17O96001 155 aa7.58□□□□□ -1.2
SLIRP-205ENST00000556310 HLA-DQA1P01909 254 aa7.58□□□□□ -1.2
SLIRP-205ENST00000556310 RPS10P46783 165 aaKnown RBP7.58□□□□□ -1.2
SLIRP-205ENST00000556310 C14orf177Q52M58 125 aa7.58□□□□□ -1.2
SLIRP-205ENST00000556310 TRAV8-4A0A0B4J246 113 aa7.57□□□□□ -1.2
SLIRP-205ENST00000556310 TRBV27A0A0K0K1C4 114 aa7.57□□□□□ -1.2
SLIRP-205ENST00000556310 TSHBP01222 138 aa7.57□□□□□ -1.2
SLIRP-205ENST00000556310 S100A8P05109 93 aa7.57□□□□□ -1.2
SLIRP-205ENST00000556310 PMCHP20382 165 aa7.57□□□□□ -1.2
SLIRP-205ENST00000556310 CAMPP49913 170 aa7.57□□□□□ -1.2
SLIRP-205ENST00000556310 POLR2KP53803 58 aaKnown RBP7.57□□□□□ -1.2
SLIRP-205ENST00000556310 HBBP68871 147 aa7.57□□□□□ -1.2
SLIRP-205ENST00000556310 IFITM2Q01629 132 aa7.57□□□□□ -1.2
SLIRP-205ENST00000556310 FAM104BQ5XKR9 115 aa7.57□□□□□ -1.2
SLIRP-205ENST00000556310 Q8N1X5 172 aa7.57□□□□□ -1.2
SLIRP-205ENST00000556310 TMEM242Q9NWH2 141 aa7.57□□□□□ -1.2
SLIRP-205ENST00000556310 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.56□□□□□ -1.2
SLIRP-205ENST00000556310 A0A1B0GXF2 115 aa7.56□□□□□ -1.2
SLIRP-205ENST00000556310 IGKV2-29A2NJV5 120 aaPredicted RBP7.56□□□□□ -1.2
SLIRP-205ENST00000556310 SMKR1H3BMG3 65 aa7.56□□□□□ -1.2
SLIRP-205ENST00000556310 XGP55808 180 aa7.56□□□□□ -1.2
SLIRP-205ENST00000556310 MRPL51Q4U2R6 128 aaKnown RBP7.56□□□□□ -1.2
SLIRP-205ENST00000556310 AMMECR1LQ6DCA0 310 aa7.56□□□□□ -1.2
SLIRP-205ENST00000556310 MRPL54Q6P161 138 aaKnown RBP7.56□□□□□ -1.2
SLIRP-205ENST00000556310 KRTAP26-1Q6PEX3 210 aa7.56□□□□□ -1.2
SLIRP-205ENST00000556310 NRACQ8N912 160 aa7.56□□□□□ -1.2
SLIRP-205ENST00000556310 KRTAP17-1Q9BYP8 105 aa7.56□□□□□ -1.2
SLIRP-205ENST00000556310 IGLV10-54A0A075B6I4 117 aa7.55□□□□□ -1.2
SLIRP-205ENST00000556310 LINC00862A6NCI5 91 aa7.55□□□□□ -1.2
SLIRP-205ENST00000556310 USP17L23D6RBM5 183 aa7.55□□□□□ -1.2
SLIRP-205ENST00000556310 FGF6P10767 208 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms