RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SYS1-DBNDD2H3BUS1 97 aa4.94□□□□□ -1.62
SLIRP-204ENST00000555890 K7EMI3 77 aa4.94□□□□□ -1.62
SLIRP-204ENST00000555890 GATA1P15976 413 aaPredicted RBP4.94□□□□□ -1.62
SLIRP-204ENST00000555890 FCER1GP30273 86 aa4.94□□□□□ -1.62
SLIRP-204ENST00000555890 ZNF876PQ49A33 203 aa4.94□□□□□ -1.62
SLIRP-204ENST00000555890 PIK3CD-AS1Q5SR53 167 aa4.94□□□□□ -1.62
SLIRP-204ENST00000555890 MAPKAPK5-AS1Q8N8E1 139 aa4.94□□□□□ -1.62
SLIRP-204ENST00000555890 MCRIP2Q9BUT9 160 aaKnown RBP4.94□□□□□ -1.62
SLIRP-204ENST00000555890 VAMP8Q9BV40 100 aa4.94□□□□□ -1.62
SLIRP-204ENST00000555890 XCL2Q9UBD3 114 aa4.94□□□□□ -1.62
SLIRP-204ENST00000555890 GOLT1BQ9Y3E0 138 aa4.94□□□□□ -1.62
SLIRP-204ENST00000555890 KIF25-AS1Q9Y6Z4 181 aa4.94□□□□□ -1.62
SLIRP-204ENST00000555890 TRAV26-2A0A0B4J265 109 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 A8MWV9 139 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 H7C1H1 209 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 M0R2P5 195 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 GAS8-AS1O95177 125 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 G0S2P27469 103 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 LAGE3Q14657 143 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 ZNF56Q15929 161 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 ORMDL2Q53FV1 153 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 TEX43Q6ZNM6 134 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 GTSCR1Q86UQ5 136 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 Q8N976 141 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 RASL10AQ92737 203 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 NDUFAF3Q9BU61 184 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 SMIM2Q9BVW6 85 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 PRO1933Q9H354 126 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 ST20Q9HBF5 79 aa4.93□□□□□ -1.62
SLIRP-204ENST00000555890 DYNC1H1Q14204 4646 aaKnown RBP4.93□□□□□ -1.62
SLIRP-204ENST00000555890 IGLV2-18A0A075B6J9 118 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 LINC01549A6NIU2 74 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 ATP5LO75964 103 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 CRYGDP07320 174 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 LINC00315P59091 139 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 RPL32P62910 135 aaKnown RBP4.92□□□□□ -1.62
SLIRP-204ENST00000555890 FAM74A4Q5TZK3 123 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 SPATA12Q7Z6I5 190 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 ZNF664Q8N3J9 261 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 WFDC9Q8NEX5 89 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 C18orf15Q96N68 181 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 JPT2Q9H910 190 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 DNAH11Q96DT5 4516 aa4.92□□□□□ -1.62
SLIRP-204ENST00000555890 IGHV3OR16-12A0A075B7B8 117 aa4.91□□□□□ -1.62
SLIRP-204ENST00000555890 TRAV9-2A0A087WT02 112 aa4.91□□□□□ -1.62
SLIRP-204ENST00000555890 A0A096LNJ9 63 aa4.91□□□□□ -1.62
SLIRP-204ENST00000555890 TRBV6-5A0A0K0K1A5 114 aa4.91□□□□□ -1.62
SLIRP-204ENST00000555890 NUDT3O95989 172 aa4.91□□□□□ -1.62
SLIRP-204ENST00000555890 RPL35AP18077 110 aaKnown RBP4.91□□□□□ -1.62
SLIRP-204ENST00000555890 ZNF705AQ6ZN79 300 aaPredicted RBP4.91□□□□□ -1.62
SLIRP-204ENST00000555890 LINC00173Q6ZV60 143 aa4.91□□□□□ -1.62
SLIRP-204ENST00000555890 C1orf158Q8N1D5 194 aa4.91□□□□□ -1.62
SLIRP-204ENST00000555890 C11orf72Q8NBR9 251 aa4.91□□□□□ -1.62
SLIRP-204ENST00000555890 IFI27L1Q96BM0 104 aa4.91□□□□□ -1.62
SLIRP-204ENST00000555890 RPL39LQ96EH5 51 aaKnown RBP4.91□□□□□ -1.62
SLIRP-204ENST00000555890 CSTL1Q9H114 145 aa4.91□□□□□ -1.62
SLIRP-204ENST00000555890 FAT2Q9NYQ8 4349 aa4.91□□□□□ -1.62
SLIRP-204ENST00000555890 GAGE12JA6NER3 117 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 HSBP1L1C9JCN9 74 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 H0Y8G0 127 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 M0QY20 66 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 TCAPO15273 167 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 RS1O15537 224 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 IGLL1P15814 213 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 DDTP30046 118 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 GAGE2BQ13066 116 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 GAGE2EQ4V326 116 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 SPATA45Q537H7 98 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 GAGE2AQ6NT46 116 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 TMEM263Q8WUH6 116 aaKnown RBP4.9□□□□□ -1.63
SLIRP-204ENST00000555890 KIR2DL4Q99706 377 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 GAGE2DQ9UEU5 116 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 PAM16Q9Y3D7 125 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 MYCBP2O75592 4640 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 VPS13DQ5THJ4 4388 aa4.9□□□□□ -1.63
SLIRP-204ENST00000555890 KIR2DL5BA0A0G2JN68 375 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 KIR2DL5BA0A0G2JPC4 375 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 SDHAF1A6NFY7 115 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 LINC00587B1AMM8 73 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.89□□□□□ -1.63
SLIRP-204ENST00000555890 PRSS1P07477 247 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 AZU1P20160 251 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 POLR2KP53803 58 aaKnown RBP4.89□□□□□ -1.63
SLIRP-204ENST00000555890 UBE2V1Q13404 147 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 RRN3P1Q2M238 152 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 LGALS9BQ3B8N2 356 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 LINC01545Q5VT33 79 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 LGALS9CQ6DKI2 356 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 ZFP2Q6ZN57 461 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 ATOH7Q8N100 152 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 KIR2DL5AQ8N109 375 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 Q8N1X5 172 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 C16orf74Q96GX8 76 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 DNAJC30Q96LL9 226 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 WFDC10AQ9H1F0 79 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 EDA2RQ9HAV5 297 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 MRPL16Q9NX20 251 aaKnown RBP4.89□□□□□ -1.63
SLIRP-204ENST00000555890 TNFRSF18Q9Y5U5 241 aa4.89□□□□□ -1.63
SLIRP-204ENST00000555890 DNAH17Q9UFH2 4485 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms