RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PPP1R1CQ8WVI7 109 aa5.48□□□□□ -1.53
PRKCH-218ENST00000555628 ZNF471Q9BX82 626 aaPredicted RBP5.48□□□□□ -1.53
PRKCH-218ENST00000555628 SMIM3Q9BZL3 60 aa5.48□□□□□ -1.53
PRKCH-218ENST00000555628 TMSB15BA0A087X1C1 80 aa5.47□□□□□ -1.53
PRKCH-218ENST00000555628 SNAI2O43623 268 aa5.47□□□□□ -1.53
PRKCH-218ENST00000555628 SCGB1C1Q8TD33 95 aa5.47□□□□□ -1.53
PRKCH-218ENST00000555628 AQP10Q96PS8 301 aa5.47□□□□□ -1.53
PRKCH-218ENST00000555628 LINC00474Q9P2X8 69 aa5.47□□□□□ -1.53
PRKCH-218ENST00000555628 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
PRKCH-218ENST00000555628 M0QY20 66 aa5.46□□□□□ -1.54
PRKCH-218ENST00000555628 MPC2O95563 127 aa5.46□□□□□ -1.54
PRKCH-218ENST00000555628 IFNA7P01567 189 aa5.46□□□□□ -1.54
PRKCH-218ENST00000555628 CXCL1P09341 107 aa5.46□□□□□ -1.54
PRKCH-218ENST00000555628 RPL12P30050 165 aaKnown RBP5.46□□□□□ -1.54
PRKCH-218ENST00000555628 MED28Q9H204 178 aa5.46□□□□□ -1.54
PRKCH-218ENST00000555628 TMEM167BQ9NRX6 74 aa5.46□□□□□ -1.54
PRKCH-218ENST00000555628 ZFP30Q9Y2G7 519 aa5.46□□□□□ -1.54
PRKCH-218ENST00000555628 TRAV26-2A0A0B4J265 109 aa5.45□□□□□ -1.54
PRKCH-218ENST00000555628 A0A1W2PNN7 141 aa5.45□□□□□ -1.54
PRKCH-218ENST00000555628 CXorf1O96002 111 aa5.45□□□□□ -1.54
PRKCH-218ENST00000555628 LTAP01374 205 aa5.45□□□□□ -1.54
PRKCH-218ENST00000555628 OR5AL1P0C617 328 aa5.45□□□□□ -1.54
PRKCH-218ENST00000555628 PCP4P48539 62 aa5.45□□□□□ -1.54
PRKCH-218ENST00000555628 CACNG7P62955 275 aa5.45□□□□□ -1.54
PRKCH-218ENST00000555628 ZNF726P1Q15940 193 aa5.45□□□□□ -1.54
PRKCH-218ENST00000555628 TMEM243Q9BU79 118 aa5.45□□□□□ -1.54
PRKCH-218ENST00000555628 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
PRKCH-218ENST00000555628 FAM74A7A6NL05 159 aa5.44□□□□□ -1.54
PRKCH-218ENST00000555628 CYCSP99999 105 aaKnown RBP5.44□□□□□ -1.54
PRKCH-218ENST00000555628 PRR4Q16378 134 aa5.44□□□□□ -1.54
PRKCH-218ENST00000555628 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.44□□□□□ -1.54
PRKCH-218ENST00000555628 HIST1H2BAQ96A08 127 aa5.44□□□□□ -1.54
PRKCH-218ENST00000555628 PGLYRP4Q96LB8 373 aa5.44□□□□□ -1.54
PRKCH-218ENST00000555628 PSMG3Q9BT73 122 aaPredicted RBP5.44□□□□□ -1.54
PRKCH-218ENST00000555628 IGLV1-50A0A075B6I6 118 aa5.43□□□□□ -1.54
PRKCH-218ENST00000555628 ATP6V0CP27449 155 aa5.43□□□□□ -1.54
PRKCH-218ENST00000555628 KRTAP11-1Q8IUC1 163 aa5.43□□□□□ -1.54
PRKCH-218ENST00000555628 CHCHD10Q8WYQ3 142 aaPredicted RBP5.43□□□□□ -1.54
PRKCH-218ENST00000555628 MUC21A0A140T8X8 626 aa5.42□□□□□ -1.54
PRKCH-218ENST00000555628 H0Y9J4 135 aa5.42□□□□□ -1.54
PRKCH-218ENST00000555628 SUMO4Q6EEV6 95 aa5.42□□□□□ -1.54
PRKCH-218ENST00000555628 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
PRKCH-218ENST00000555628 FMC1Q96HJ9 113 aa5.42□□□□□ -1.54
PRKCH-218ENST00000555628 CARD19Q96LW7 228 aa5.42□□□□□ -1.54
PRKCH-218ENST00000555628 FAM240BA0A1B0GVZ2 78 aa5.41□□□□□ -1.54
PRKCH-218ENST00000555628 IGLV7-43P04211 117 aa5.41□□□□□ -1.54
PRKCH-218ENST00000555628 AMTP48728 403 aa5.41□□□□□ -1.54
PRKCH-218ENST00000555628 SULT1A2P50226 295 aa5.41□□□□□ -1.54
PRKCH-218ENST00000555628 UBE2G2P60604 165 aa5.41□□□□□ -1.54
PRKCH-218ENST00000555628 SERF2P84101 59 aa5.41□□□□□ -1.54
PRKCH-218ENST00000555628 DIRC1Q969H9 104 aa5.41□□□□□ -1.54
PRKCH-218ENST00000555628 AP1S3Q96PC3 154 aa5.41□□□□□ -1.54
PRKCH-218ENST00000555628 PKIGQ9Y2B9 76 aa5.41□□□□□ -1.54
PRKCH-218ENST00000555628 PET100P0DJ07 73 aa5.4□□□□□ -1.54
PRKCH-218ENST00000555628 NKX2-5P52952 324 aaPredicted RBP5.4□□□□□ -1.54
PRKCH-218ENST00000555628 C1orf137Q5JT78 98 aa5.4□□□□□ -1.54
PRKCH-218ENST00000555628 FER1L6-AS1Q8NA97 138 aa5.4□□□□□ -1.54
PRKCH-218ENST00000555628 CCDC32Q9BV29 185 aa5.4□□□□□ -1.54
PRKCH-218ENST00000555628 NKX6-2Q9C056 277 aaPredicted RBP5.4□□□□□ -1.54
PRKCH-218ENST00000555628 ACTR3CQ9C0K3 210 aaPredicted RBP5.4□□□□□ -1.54
PRKCH-218ENST00000555628 CTDSP1Q9GZU7 261 aa5.4□□□□□ -1.54
PRKCH-218ENST00000555628 TNFSF18Q9UNG2 199 aa5.4□□□□□ -1.54
PRKCH-218ENST00000555628 MBP02144 154 aa5.39□□□□□ -1.55
PRKCH-218ENST00000555628 MT-ND6P03923 174 aa5.39□□□□□ -1.55
PRKCH-218ENST00000555628 DEFA3P59666 94 aa5.39□□□□□ -1.55
PRKCH-218ENST00000555628 C9orf116Q5BN46 136 aaPredicted RBP5.39□□□□□ -1.55
PRKCH-218ENST00000555628 SPANXN1Q5VSR9 72 aa5.39□□□□□ -1.55
PRKCH-218ENST00000555628 PHF5AQ7RTV0 110 aaKnown RBP5.39□□□□□ -1.55
PRKCH-218ENST00000555628 IGHV1-58A0A0C4DH39 117 aa5.38□□□□□ -1.55
PRKCH-218ENST00000555628 IGKV3OR2-268A0A0C4DH90 116 aa5.38□□□□□ -1.55
PRKCH-218ENST00000555628 CTXND1A0A1B0GTU2 59 aa5.38□□□□□ -1.55
PRKCH-218ENST00000555628 CCDC160A6NGH7 325 aa5.38□□□□□ -1.55
PRKCH-218ENST00000555628 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.38□□□□□ -1.55
PRKCH-218ENST00000555628 PAGE4O60829 102 aa5.38□□□□□ -1.55
PRKCH-218ENST00000555628 IGLC6P0CF74 106 aa5.38□□□□□ -1.55
PRKCH-218ENST00000555628 MEF2BQ02080 365 aaPredicted RBP5.38□□□□□ -1.55
PRKCH-218ENST00000555628 SYCNQ0VAF6 134 aa5.38□□□□□ -1.55
PRKCH-218ENST00000555628 RASL11AQ6T310 242 aa5.38□□□□□ -1.55
PRKCH-218ENST00000555628 TCEAL7Q9BRU2 100 aa5.38□□□□□ -1.55
PRKCH-218ENST00000555628 LOC107984640A0A0U1RRK4 108 aa5.37□□□□□ -1.55
PRKCH-218ENST00000555628 NPSP0C0P6 89 aa5.37□□□□□ -1.55
PRKCH-218ENST00000555628 BCL2P10415 239 aa5.37□□□□□ -1.55
PRKCH-218ENST00000555628 FHITP49789 147 aa5.37□□□□□ -1.55
PRKCH-218ENST00000555628 UBE2G1P62253 170 aa5.37□□□□□ -1.55
PRKCH-218ENST00000555628 UBE2L6O14933 153 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 MGPP08493 103 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 SMIM17P0DL12 118 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 NTF3P20783 257 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 XCL1P47992 114 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 CAMPP49913 170 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 GAGE2BQ13066 116 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 COTL1Q14019 142 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 NUP35Q8NFH5 326 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 OR5A1Q8NGJ0 315 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 MARVELD1Q9BSK0 173 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 NIT2Q9NQR4 276 aa5.36□□□□□ -1.55
PRKCH-218ENST00000555628 LINC00959A0A1B0GUT2 108 aa5.35□□□□□ -1.55
PRKCH-218ENST00000555628 CCL25O15444 150 aa5.35□□□□□ -1.55
PRKCH-218ENST00000555628 APOMO95445 188 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms