RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 CRYBA4P53673 196 aa6.16□□□□□ -1.42
SYNE2-220ENST00000555612 SIVA1O15304 175 aa6.16□□□□□ -1.42
SYNE2-220ENST00000555612 EBI3Q14213 229 aa6.16□□□□□ -1.42
SYNE2-220ENST00000555612 K7EP34 96 aa6.16□□□□□ -1.42
SYNE2-220ENST00000555612 CHD3Q12873 2000 aaKnown RBP6.16□□□□□ -1.42
SYNE2-220ENST00000555612 DENND4AQ7Z401 1863 aa6.16□□□□□ -1.42
SYNE2-220ENST00000555612 FAM19A1Q7Z5A9 133 aa6.16□□□□□ -1.42
SYNE2-220ENST00000555612 PSMB8P28062 276 aa6.15□□□□□ -1.42
SYNE2-220ENST00000555612 Q6ZS46 218 aa6.15□□□□□ -1.42
SYNE2-220ENST00000555612 ODF3Q96PU9 254 aa6.15□□□□□ -1.42
SYNE2-220ENST00000555612 FREM1Q5H8C1 2179 aa6.15□□□□□ -1.42
SYNE2-220ENST00000555612 BBC3Q96PG8 261 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-220ENST00000555612 C11orf86A6NJI1 115 aa6.15□□□□□ -1.42
SYNE2-220ENST00000555612 GDF5OSQ5U4N7 250 aa6.15□□□□□ -1.42
SYNE2-220ENST00000555612 FAM19A5Q7Z5A7 132 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-220ENST00000555612 DSCAMO60469 2012 aa6.15□□□□□ -1.42
SYNE2-220ENST00000555612 F8W1H4 67 aa6.15□□□□□ -1.43
SYNE2-220ENST00000555612 NREPQ16612 68 aa6.15□□□□□ -1.43
SYNE2-220ENST00000555612 C7orf33Q8WU49 177 aa6.15□□□□□ -1.43
SYNE2-220ENST00000555612 H0Y9J4 135 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 CHKB-CPT1BH3BT56 60 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 TTTY13Q9BZ97 58 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 BRWD1-AS2P59051 145 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 ANKRD29Q8N6D5 301 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 AVPP01185 164 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 COX7BP24311 80 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 CRYGBP07316 175 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 ANKRD39Q53RE8 183 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 UFSP1Q6NVU6 142 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 ZNF295-AS1Q8N0V1 137 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 CDPF1Q6NVV7 123 aa6.14□□□□□ -1.43
SYNE2-220ENST00000555612 IGHV1-58A0A0C4DH39 117 aa6.13□□□□□ -1.43
SYNE2-220ENST00000555612 NANOS2P60321 138 aaKnown RBP6.13□□□□□ -1.43
SYNE2-220ENST00000555612 A0A0J9YWU9 116 aa6.13□□□□□ -1.43
SYNE2-220ENST00000555612 KPRPQ5T749 579 aaPredicted RBP6.13□□□□□ -1.43
SYNE2-220ENST00000555612 LINC00467Q9BRT7 94 aa6.13□□□□□ -1.43
SYNE2-220ENST00000555612 ZFAND3Q9H8U3 227 aa6.13□□□□□ -1.43
SYNE2-220ENST00000555612 Q6ZVH6 145 aa6.13□□□□□ -1.43
SYNE2-220ENST00000555612 Q6ZPA2 131 aa6.13□□□□□ -1.43
SYNE2-220ENST00000555612 PRRC2AP48634 2157 aaKnown RBP6.13□□□□□ -1.43
SYNE2-220ENST00000555612 TNRC6AQ8NDV7 1962 aaKnown RBP6.12□□□□□ -1.43
SYNE2-220ENST00000555612 SORL1Q92673 2214 aa6.12□□□□□ -1.43
SYNE2-220ENST00000555612 LINC01545Q5VT33 79 aa6.12□□□□□ -1.43
SYNE2-220ENST00000555612 NEXN-AS1Q8NBZ9 246 aa6.12□□□□□ -1.43
SYNE2-220ENST00000555612 CFAP126Q5VTH2 177 aa6.12□□□□□ -1.43
SYNE2-220ENST00000555612 NFE4Q86UQ8 179 aa6.12□□□□□ -1.43
SYNE2-220ENST00000555612 Q8N976 141 aa6.12□□□□□ -1.43
SYNE2-220ENST00000555612 IGHV4-30-4P0DP06 118 aa6.12□□□□□ -1.43
SYNE2-220ENST00000555612 OBSL1O75147 1896 aa6.12□□□□□ -1.43
SYNE2-220ENST00000555612 C19orf71A6NCJ1 209 aa6.12□□□□□ -1.43
SYNE2-220ENST00000555612 CITED1Q99966 193 aa6.11□□□□□ -1.43
SYNE2-220ENST00000555612 NUPR1O60356 82 aa6.11□□□□□ -1.43
SYNE2-220ENST00000555612 PROK1P58294 105 aa6.11□□□□□ -1.43
SYNE2-220ENST00000555612 MBD6Q96DN6 1003 aa6.11□□□□□ -1.43
SYNE2-220ENST00000555612 K7EP13 123 aa6.11□□□□□ -1.43
SYNE2-220ENST00000555612 FRMD6-AS1P0C7T7 363 aa6.11□□□□□ -1.43
SYNE2-220ENST00000555612 UBE2D1P51668 147 aa6.11□□□□□ -1.43
SYNE2-220ENST00000555612 XAGE1AQ9HD64 81 aa6.11□□□□□ -1.43
SYNE2-220ENST00000555612 TRBV6-8A0A0A6YYG3 113 aa6.11□□□□□ -1.43
SYNE2-220ENST00000555612 A0A1B0GX51 115 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 NPSP0C0P6 89 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 SYCNQ0VAF6 134 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 CLUHP3Q96NS8 147 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 RETNQ9HD89 108 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 NAV3Q8IVL0 2385 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 NDUFA7O95182 113 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 EIF4EBP1Q13541 118 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-220ENST00000555612 KIR2DL5BQ8NHK3 375 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 MUC22E2RYF6 1773 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-220ENST00000555612 TRBV6-4A0A1B0GX49 114 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 E9PLD3 99 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 CLEC2BQ92478 149 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 LINC00322Q6ZN03 302 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-220ENST00000555612 Q8N6K4 173 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 C9orf85Q96MD7 179 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 PIEZO2Q9H5I5 2752 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 PCDH15Q96QU1 1955 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 MP68P56378 58 aa6.1□□□□□ -1.43
SYNE2-220ENST00000555612 PRR14LQ5THK1 2151 aa6.09□□□□□ -1.43
SYNE2-220ENST00000555612 IGKV3D-7A0A0C4DH55 119 aa6.09□□□□□ -1.43
SYNE2-220ENST00000555612 H3BQ85 93 aa6.09□□□□□ -1.43
SYNE2-220ENST00000555612 C14orf132Q9NPU4 83 aa6.09□□□□□ -1.43
SYNE2-220ENST00000555612 NCOA6Q14686 2063 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-220ENST00000555612 LOC100131303A0A0U1RQF7 123 aa6.09□□□□□ -1.43
SYNE2-220ENST00000555612 PRM2P04554 102 aa6.09□□□□□ -1.43
SYNE2-220ENST00000555612 IGLV1-40P01703 118 aa6.09□□□□□ -1.44
SYNE2-220ENST00000555612 RBM3P98179 157 aaKnown RBP6.08□□□□□ -1.44
SYNE2-220ENST00000555612 LINC00526Q96FQ7 95 aa6.08□□□□□ -1.44
SYNE2-220ENST00000555612 H7C423 109 aa6.08□□□□□ -1.44
SYNE2-220ENST00000555612 SPATA12Q7Z6I5 190 aa6.08□□□□□ -1.44
SYNE2-220ENST00000555612 ODF1Q14990 250 aa6.08□□□□□ -1.44
SYNE2-220ENST00000555612 CDKN2A-AS1Q9UH64 79 aa6.08□□□□□ -1.44
SYNE2-220ENST00000555612 IGKV2D-26A0A0A0MRZ7 120 aa6.08□□□□□ -1.44
SYNE2-220ENST00000555612 IGLC6P0CF74 106 aa6.08□□□□□ -1.44
SYNE2-220ENST00000555612 MIAQ16674 131 aa6.08□□□□□ -1.44
SYNE2-220ENST00000555612 LINC01620Q4KN68 170 aa6.07□□□□□ -1.44
SYNE2-220ENST00000555612 FXYD2P54710 66 aa6.07□□□□□ -1.44
SYNE2-220ENST00000555612 RBX1P62877 108 aa6.07□□□□□ -1.44
SYNE2-220ENST00000555612 NUPR2A6NF83 97 aa6.07□□□□□ -1.44
SYNE2-220ENST00000555612 BRI3O95415 125 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms