RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 VSTM2AQ8TAG5 236 aa-1.1□□□□□ -2.59
SNX6-204ENST00000555541 R4GMQ9 66 aa-1.1□□□□□ -2.59
SNX6-204ENST00000555541 IFT172Q9UG01 1749 aa-1.1□□□□□ -2.59
SNX6-204ENST00000555541 PPP1R17O96001 155 aa-1.11□□□□□ -2.59
SNX6-204ENST00000555541 CCL18P55774 89 aa-1.11□□□□□ -2.59
SNX6-204ENST00000555541 TOMM20LQ6UXN7 152 aa-1.11□□□□□ -2.59
SNX6-204ENST00000555541 ZNF818PQ6ZRF7 136 aa-1.11□□□□□ -2.59
SNX6-204ENST00000555541 CTAGE3PQ8IX95 158 aa-1.11□□□□□ -2.59
SNX6-204ENST00000555541 TCTE3Q8IZS6 198 aa-1.11□□□□□ -2.59
SNX6-204ENST00000555541 LINC00312Q9Y6C7 94 aa-1.11□□□□□ -2.59
SNX6-204ENST00000555541 KIAA0100Q14667 2235 aaKnown RBP-1.11□□□□□ -2.59
SNX6-204ENST00000555541 MYH3P11055 1940 aa-1.11□□□□□ -2.59
SNX6-204ENST00000555541 LAMC1P11047 1609 aa-1.11□□□□□ -2.59
SNX6-204ENST00000555541 TRBV20-1A0A075B6N2 111 aa-1.12□□□□□ -2.59
SNX6-204ENST00000555541 E5RI56 91 aa-1.12□□□□□ -2.59
SNX6-204ENST00000555541 M0R135 149 aa-1.12□□□□□ -2.59
SNX6-204ENST00000555541 S100GP29377 79 aa-1.12□□□□□ -2.59
SNX6-204ENST00000555541 MIC13Q5XKP0 118 aa-1.12□□□□□ -2.59
SNX6-204ENST00000555541 Q6JHZ5 121 aa-1.12□□□□□ -2.59
SNX6-204ENST00000555541 DEFB105AQ8NG35 78 aa-1.12□□□□□ -2.59
SNX6-204ENST00000555541 RYR2Q92736 4967 aa-1.12□□□□□ -2.59
SNX6-204ENST00000555541 M0R129 80 aa-1.13□□□□□ -2.59
SNX6-204ENST00000555541 TNFSF15O95150 251 aa-1.13□□□□□ -2.59
SNX6-204ENST00000555541 GNG10P50151 68 aa-1.13□□□□□ -2.59
SNX6-204ENST00000555541 NCS1P62166 190 aa-1.13□□□□□ -2.59
SNX6-204ENST00000555541 S100A7L2Q5SY68 101 aa-1.13□□□□□ -2.59
SNX6-204ENST00000555541 TMEM170BQ5T4T1 132 aa-1.13□□□□□ -2.59
SNX6-204ENST00000555541 BICRAQ9NZM4 1560 aa-1.13□□□□□ -2.59
SNX6-204ENST00000555541 EPG5Q9HCE0 2579 aa-1.13□□□□□ -2.59
SNX6-204ENST00000555541 SIPA1L3O60292 1781 aaPredicted RBP-1.13□□□□□ -2.59
SNX6-204ENST00000555541 ARFGEF1Q9Y6D6 1849 aa-1.14□□□□□ -2.59
SNX6-204ENST00000555541 A0A1B0GV72 72 aa-1.14□□□□□ -2.59
SNX6-204ENST00000555541 IL5P05113 134 aa-1.14□□□□□ -2.59
SNX6-204ENST00000555541 PIPP12273 146 aaPredicted RBP-1.14□□□□□ -2.59
SNX6-204ENST00000555541 RPS28P62857 69 aaKnown RBP-1.14□□□□□ -2.59
SNX6-204ENST00000555541 DEFB135Q30KP9 77 aa-1.14□□□□□ -2.59
SNX6-204ENST00000555541 SKA2Q8WVK7 121 aaPredicted RBP-1.14□□□□□ -2.59
SNX6-204ENST00000555541 SAR1AQ9NR31 198 aa-1.14□□□□□ -2.59
SNX6-204ENST00000555541 HIGD1AQ9Y241 93 aa-1.14□□□□□ -2.59
SNX6-204ENST00000555541 PAPPAQ13219 1627 aa-1.15□□□□□ -2.59
SNX6-204ENST00000555541 TSC2P49815 1807 aa-1.15□□□□□ -2.59
SNX6-204ENST00000555541 WNK3Q9BYP7 1800 aa-1.15□□□□□ -2.59
SNX6-204ENST00000555541 KDM3BQ7LBC6 1761 aa-1.15□□□□□ -2.59
SNX6-204ENST00000555541 ARHGEF10O15013 1369 aa-1.15□□□□□ -2.59
SNX6-204ENST00000555541 TRAV36DV7A0A075B6V5 113 aa-1.15□□□□□ -2.59
SNX6-204ENST00000555541 CBLN1P23435 193 aa-1.15□□□□□ -2.59
SNX6-204ENST00000555541 COX17Q14061 63 aa-1.15□□□□□ -2.59
SNX6-204ENST00000555541 CDC26Q8NHZ8 85 aa-1.15□□□□□ -2.59
SNX6-204ENST00000555541 DNAJC13O75165 2243 aa-1.16□□□□□ -2.59
SNX6-204ENST00000555541 E2F6O75461 281 aa-1.16□□□□□ -2.6
SNX6-204ENST00000555541 SNCGO76070 127 aa-1.16□□□□□ -2.6
SNX6-204ENST00000555541 SCTP09683 121 aa-1.16□□□□□ -2.6
SNX6-204ENST00000555541 TFAMQ00059 246 aaKnown RBP-1.16□□□□□ -2.6
SNX6-204ENST00000555541 PSMG3Q9BT73 122 aaPredicted RBP-1.16□□□□□ -2.6
SNX6-204ENST00000555541 SEC11CQ9BY50 192 aa-1.16□□□□□ -2.6
SNX6-204ENST00000555541 MRPL40Q9NQ50 206 aaKnown RBP-1.16□□□□□ -2.6
SNX6-204ENST00000555541 LRRC37A3O60309 1634 aa-1.16□□□□□ -2.6
SNX6-204ENST00000555541 DAPK1P53355 1430 aa-1.16□□□□□ -2.6
SNX6-204ENST00000555541 BIRC6Q9NR09 4857 aa-1.17□□□□□ -2.6
SNX6-204ENST00000555541 PARP14Q460N5 1801 aa-1.17□□□□□ -2.6
SNX6-204ENST00000555541 A0A1B0GX51 115 aa-1.17□□□□□ -2.6
SNX6-204ENST00000555541 DEFB123Q8N688 67 aa-1.17□□□□□ -2.6
SNX6-204ENST00000555541 MAFIPQ8WZ33 124 aa-1.17□□□□□ -2.6
SNX6-204ENST00000555541 V9GYH0 126 aa-1.17□□□□□ -2.6
SNX6-204ENST00000555541 MUC17Q685J3 4493 aa-1.17□□□□□ -2.6
SNX6-204ENST00000555541 CASKIN1Q8WXD9 1431 aa-1.17□□□□□ -2.6
SNX6-204ENST00000555541 PLXNB2O15031 1838 aa-1.17□□□□□ -2.6
SNX6-204ENST00000555541 SONP18583 2426 aaKnown RBP-1.18□□□□□ -2.6
SNX6-204ENST00000555541 MUC22E2RYF6 1773 aaPredicted RBP-1.18□□□□□ -2.6
SNX6-204ENST00000555541 USP9YO00507 2555 aaPredicted RBP-1.18□□□□□ -2.6
SNX6-204ENST00000555541 SYS1-DBNDD2H3BUS1 97 aa-1.18□□□□□ -2.6
SNX6-204ENST00000555541 PITX3O75364 302 aa-1.18□□□□□ -2.6
SNX6-204ENST00000555541 CCL8P80075 99 aa-1.18□□□□□ -2.6
SNX6-204ENST00000555541 C10orf128Q5T292 105 aa-1.18□□□□□ -2.6
SNX6-204ENST00000555541 MMGT1Q8N4V1 131 aa-1.18□□□□□ -2.6
SNX6-204ENST00000555541 SPTSSAQ969W0 71 aa-1.18□□□□□ -2.6
SNX6-204ENST00000555541 LINC00472Q9H8W2 130 aa-1.18□□□□□ -2.6
SNX6-204ENST00000555541 SYNJ1O43426 1573 aa-1.18□□□□□ -2.6
SNX6-204ENST00000555541 MRC1P22897 1456 aa-1.18□□□□□ -2.6
SNX6-204ENST00000555541 FAM236AA0A1B0GUQ0 79 aa-1.19□□□□□ -2.6
SNX6-204ENST00000555541 FAM236BA0A1B0GV22 79 aa-1.19□□□□□ -2.6
SNX6-204ENST00000555541 LRRC37A2A6NM11 1700 aa-1.19□□□□□ -2.6
SNX6-204ENST00000555541 TSTD3H0UI37 97 aa-1.19□□□□□ -2.6
SNX6-204ENST00000555541 AQP10Q96PS8 301 aa-1.19□□□□□ -2.6
SNX6-204ENST00000555541 LAMA2P24043 3122 aaKnown RBP-1.19□□□□□ -2.6
SNX6-204ENST00000555541 PKHD1L1Q86WI1 4243 aa-1.19□□□□□ -2.6
SNX6-204ENST00000555541 POLA1P09884 1462 aaPredicted RBP-1.19□□□□□ -2.6
SNX6-204ENST00000555541 GAPVD1Q14C86 1478 aa-1.19□□□□□ -2.6
SNX6-204ENST00000555541 VPS13DQ5THJ4 4388 aa-1.19□□□□□ -2.6
SNX6-204ENST00000555541 FAT3Q8TDW7 4589 aa-1.2□□□□□ -2.6
SNX6-204ENST00000555541 NDUFB6O95139 128 aa-1.2□□□□□ -2.6
SNX6-204ENST00000555541 RRAS2P62070 204 aaPredicted RBP-1.2□□□□□ -2.6
SNX6-204ENST00000555541 HIST1H1AQ02539 215 aaPredicted RBP-1.2□□□□□ -2.6
SNX6-204ENST00000555541 DEFB112Q30KQ8 113 aa-1.2□□□□□ -2.6
SNX6-204ENST00000555541 CCDC153Q494R4 210 aa-1.2□□□□□ -2.6
SNX6-204ENST00000555541 BAGE2Q86Y30 109 aa-1.2□□□□□ -2.6
SNX6-204ENST00000555541 CENPHQ9H3R5 247 aa-1.2□□□□□ -2.6
SNX6-204ENST00000555541 SMPXQ9UHP9 88 aa-1.2□□□□□ -2.6
SNX6-204ENST00000555541 V9GYQ6 96 aa-1.2□□□□□ -2.6
SNX6-204ENST00000555541 GOLGA4Q13439 2230 aaKnown RBP-1.2□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms