RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 PSMB2P49721 201 aa7.23□□□□□ -1.25
RPGRIP1-208ENST00000555489 SH2D6Q7Z4S9 175 aa7.23□□□□□ -1.25
RPGRIP1-208ENST00000555489 UBE2D4Q9Y2X8 147 aa7.23□□□□□ -1.25
RPGRIP1-208ENST00000555489 CSMD2Q7Z408 3487 aa7.23□□□□□ -1.25
RPGRIP1-208ENST00000555489 UTP20O75691 2785 aaKnown RBP7.23□□□□□ -1.25
RPGRIP1-208ENST00000555489 UBR5O95071 2799 aaPredicted RBP7.23□□□□□ -1.25
RPGRIP1-208ENST00000555489 IGHV1-58A0A0C4DH39 117 aa7.22□□□□□ -1.25
RPGRIP1-208ENST00000555489 RS1O15537 224 aa7.22□□□□□ -1.25
RPGRIP1-208ENST00000555489 CHCHD7Q9BUK0 85 aa7.22□□□□□ -1.25
RPGRIP1-208ENST00000555489 C1QTNF4Q9BXJ3 329 aa7.22□□□□□ -1.25
RPGRIP1-208ENST00000555489 IGHV3-64A0A075B6Q5 118 aa7.22□□□□□ -1.25
RPGRIP1-208ENST00000555489 A4D1N5 150 aa7.22□□□□□ -1.25
RPGRIP1-208ENST00000555489 Q6ZSV7 163 aa7.22□□□□□ -1.25
RPGRIP1-208ENST00000555489 FAM104AQ969W3 186 aa7.22□□□□□ -1.25
RPGRIP1-208ENST00000555489 SPATA25Q9BR10 227 aa7.22□□□□□ -1.25
RPGRIP1-208ENST00000555489 A0A0J9YXY3 114 aa7.21□□□□□ -1.25
RPGRIP1-208ENST00000555489 FHL3Q13643 280 aa7.21□□□□□ -1.25
RPGRIP1-208ENST00000555489 KRTAP1-3Q8IUG1 177 aa7.21□□□□□ -1.25
RPGRIP1-208ENST00000555489 STHQ8IWL8 128 aa7.21□□□□□ -1.25
RPGRIP1-208ENST00000555489 MTURNQ8N3F0 131 aa7.21□□□□□ -1.25
RPGRIP1-208ENST00000555489 GAGE12HA6NDE8 117 aa7.21□□□□□ -1.26
RPGRIP1-208ENST00000555489 ODF3L2Q3SX64 289 aa7.21□□□□□ -1.26
RPGRIP1-208ENST00000555489 Q6ZSN1 163 aa7.21□□□□□ -1.26
RPGRIP1-208ENST00000555489 SIGMAR1Q99720 223 aa7.21□□□□□ -1.26
RPGRIP1-208ENST00000555489 ZNF462Q96JM2 2506 aa7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 ZANQ9Y493 2812 aa7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 TCL1BO95988 128 aa7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 SCGB1C2P0DMR2 95 aa7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 SCGB1A1P11684 91 aa7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 FOXI1Q12951 378 aa7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 CEMP1Q6PRD7 247 aaPredicted RBP7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 MUSTN1Q8IVN3 82 aa7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 TMEM263Q8WUH6 116 aaKnown RBP7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 VSIG2Q96IQ7 327 aa7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 TSSC4Q9Y5U2 329 aaPredicted RBP7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 MXRA5Q9NR99 2828 aa7.2□□□□□ -1.26
RPGRIP1-208ENST00000555489 DNAJC9-AS1A6NH13 148 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 IGHV3-33P01772 117 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 PRM2P04554 102 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 SFTA2Q6UW10 78 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 IL17DQ8TAD2 202 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 SPANXDQ9BXN6 97 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 GEMIN7Q9H840 131 aaKnown RBP7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 SPANXCQ9NY87 97 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 ERG28Q9UKR5 140 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 FAM208BQ5VWN6 2430 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 CREBBPQ92793 2442 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 IGKV2-29A2NJV5 120 aaPredicted RBP7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 SMCPP49901 116 aaPredicted RBP7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 CMC4P56277 68 aaPredicted RBP7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 Q6ZUT4 128 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 TEN1Q86WV5 123 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 SBSPONQ8IVN8 264 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 XCL2Q9UBD3 114 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 NDUFA12Q9UI09 145 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 LRRK2Q5S007 2527 aa7.19□□□□□ -1.26
RPGRIP1-208ENST00000555489 POLQO75417 2590 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 NAV2Q8IVL1 2488 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 TRBV10-1A0A0K0K1A3 114 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 M0QXV9 152 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 CCL24O00175 119 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 TIRAPP58753 221 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 ZNF418Q8TF45 676 aaPredicted RBP7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 RNF183Q96D59 192 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 LITAFQ99732 161 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 Q9UF83 564 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 USP24Q9UPU5 2620 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 IGLV5-45A0A087WSX0 123 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 TRAV8-3A0A0A6YYJ7 113 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 TIMM17BO60830 172 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 AZU1P20160 251 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 SMAGPQ0VAQ4 97 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 ZFAND6Q6FIF0 208 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 DGAT2L7PQ6IED9 249 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 PPDPFLQ8WWR9 84 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 SORL1Q92673 2214 aa7.18□□□□□ -1.26
RPGRIP1-208ENST00000555489 NACAE9PAV3 2078 aa7.17□□□□□ -1.26
RPGRIP1-208ENST00000555489 RPL36AP83881 106 aaKnown RBP7.17□□□□□ -1.26
RPGRIP1-208ENST00000555489 MIAQ16674 131 aa7.17□□□□□ -1.26
RPGRIP1-208ENST00000555489 RNASE13Q5GAN3 156 aaKnown RBP7.17□□□□□ -1.26
RPGRIP1-208ENST00000555489 C1orf158Q8N1D5 194 aa7.17□□□□□ -1.26
RPGRIP1-208ENST00000555489 RPL36ALQ969Q0 106 aaKnown RBP7.17□□□□□ -1.26
RPGRIP1-208ENST00000555489 YAE1D1Q9NRH1 226 aa7.17□□□□□ -1.26
RPGRIP1-208ENST00000555489 CSDC2Q9Y534 153 aaKnown RBP7.17□□□□□ -1.26
RPGRIP1-208ENST00000555489 PTPN13Q12923 2485 aa7.17□□□□□ -1.26
RPGRIP1-208ENST00000555489 TRGV1A0A0A0MS02 117 aa7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 IGHV3-38A0A0C4DH36 116 aa7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 HERVK_113P63121 156 aa7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 DAZ2Q13117 558 aaKnown RBP7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 DAZ4Q86SG3 579 aaKnown RBP7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 DAZ3Q9NR90 486 aaKnown RBP7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 TRBV30A0A0K0K1B3 111 aa7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 K7EQD1 137 aa7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 SPINK8P0C7L1 97 aa7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 IFITM1P13164 125 aa7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 INSL3P51460 131 aa7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 Q1RN00 199 aa7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 FAM110AQ9BQ89 295 aa7.16□□□□□ -1.26
RPGRIP1-208ENST00000555489 GTSF1LQ9H1H1 148 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms