RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 FAM231BA6NCW3 169 aa9□□□□□ -0.97
SNX6-203ENST00000555416 GCSHP23434 173 aa9□□□□□ -0.97
SNX6-203ENST00000555416 KCNIP4Q6PIL6 250 aa9□□□□□ -0.97
SNX6-203ENST00000555416 SMIM15Q7Z3B0 74 aa9□□□□□ -0.97
SNX6-203ENST00000555416 TMEM243Q9BU79 118 aa9□□□□□ -0.97
SNX6-203ENST00000555416 SMDT1Q9H4I9 107 aa9□□□□□ -0.97
SNX6-203ENST00000555416 SMIM27A0A1W2PRY6 76 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 RAB4AP20338 218 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 RPS10P46783 165 aaKnown RBP8.99□□□□□ -0.97
SNX6-203ENST00000555416 HAMPP81172 84 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 IFITM2Q01629 132 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 KRTAP26-1Q6PEX3 210 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 AMN1Q8IY45 258 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 LINC00269Q8N2A0 174 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 C20orf203Q8NBC4 194 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 FRZBQ92765 325 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 BORCS7Q96B45 105 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 TMEM191AQ9H0A3 160 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 PRR34Q9NV39 138 aa8.99□□□□□ -0.97
SNX6-203ENST00000555416 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.98□□□□□ -0.97
SNX6-203ENST00000555416 AMTP48728 403 aa8.98□□□□□ -0.97
SNX6-203ENST00000555416 Q0VG73 95 aa8.98□□□□□ -0.97
SNX6-203ENST00000555416 COTL1Q14019 142 aa8.98□□□□□ -0.97
SNX6-203ENST00000555416 NTN5Q8WTR8 489 aaPredicted RBP8.98□□□□□ -0.97
SNX6-203ENST00000555416 RMI2Q96E14 147 aa8.98□□□□□ -0.97
SNX6-203ENST00000555416 SDHAF1A6NFY7 115 aa8.97□□□□□ -0.97
SNX6-203ENST00000555416 SMKR1H3BMG3 65 aa8.97□□□□□ -0.97
SNX6-203ENST00000555416 CRPP02741 224 aa8.97□□□□□ -0.97
SNX6-203ENST00000555416 PKIAP61925 76 aa8.97□□□□□ -0.97
SNX6-203ENST00000555416 LINC01620Q4KN68 170 aa8.97□□□□□ -0.97
SNX6-203ENST00000555416 FAM30AQ9NZY2 134 aa8.97□□□□□ -0.97
SNX6-203ENST00000555416 NAT8BQ9UHF3 227 aa8.97□□□□□ -0.97
SNX6-203ENST00000555416 COX11Q9Y6N1 276 aa8.97□□□□□ -0.97
SNX6-203ENST00000555416 TRBV6-5A0A0K0K1A5 114 aa8.96□□□□□ -0.98
SNX6-203ENST00000555416 NCR2O95944 276 aa8.96□□□□□ -0.98
SNX6-203ENST00000555416 RIGQ13278 110 aa8.96□□□□□ -0.98
SNX6-203ENST00000555416 Q8N1X5 172 aa8.96□□□□□ -0.98
SNX6-203ENST00000555416 C1orf43Q9BWL3 253 aa8.96□□□□□ -0.98
SNX6-203ENST00000555416 IGLV10-54A0A075B6I4 117 aa8.95□□□□□ -0.98
SNX6-203ENST00000555416 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.95□□□□□ -0.98
SNX6-203ENST00000555416 A0A1B0GUV1 79 aa8.95□□□□□ -0.98
SNX6-203ENST00000555416 IGKV2-29A2NJV5 120 aaPredicted RBP8.95□□□□□ -0.98
SNX6-203ENST00000555416 REG3AQ06141 175 aa8.95□□□□□ -0.98
SNX6-203ENST00000555416 MIAQ16674 131 aa8.95□□□□□ -0.98
SNX6-203ENST00000555416 TMEM70Q9BUB7 260 aa8.95□□□□□ -0.98
SNX6-203ENST00000555416 TSHBP01222 138 aa8.94□□□□□ -0.98
SNX6-203ENST00000555416 HLA-DQA1P01909 254 aa8.94□□□□□ -0.98
SNX6-203ENST00000555416 CAMPP49913 170 aa8.94□□□□□ -0.98
SNX6-203ENST00000555416 POLR2KP53803 58 aaKnown RBP8.94□□□□□ -0.98
SNX6-203ENST00000555416 RAB14P61106 215 aa8.94□□□□□ -0.98
SNX6-203ENST00000555416 CLLU1Q5K131 121 aa8.94□□□□□ -0.98
SNX6-203ENST00000555416 LCE2AQ5TA79 106 aaPredicted RBP8.94□□□□□ -0.98
SNX6-203ENST00000555416 NRACQ8N912 160 aa8.94□□□□□ -0.98
SNX6-203ENST00000555416 MRAP2Q96G30 205 aa8.94□□□□□ -0.98
SNX6-203ENST00000555416 USP17L23D6RBM5 183 aa8.93□□□□□ -0.98
SNX6-203ENST00000555416 PMCHP20382 165 aa8.93□□□□□ -0.98
SNX6-203ENST00000555416 MRPL51Q4U2R6 128 aaKnown RBP8.93□□□□□ -0.98
SNX6-203ENST00000555416 FAM104BQ5XKR9 115 aa8.93□□□□□ -0.98
SNX6-203ENST00000555416 MRPL54Q6P161 138 aaKnown RBP8.93□□□□□ -0.98
SNX6-203ENST00000555416 ST20Q9HBF5 79 aa8.93□□□□□ -0.98
SNX6-203ENST00000555416 TMEM242Q9NWH2 141 aa8.93□□□□□ -0.98
SNX6-203ENST00000555416 A0A1B0GXF2 115 aa8.92□□□□□ -0.98
SNX6-203ENST00000555416 I3L3M4 83 aa8.92□□□□□ -0.98
SNX6-203ENST00000555416 UBE2L6O14933 153 aa8.92□□□□□ -0.98
SNX6-203ENST00000555416 APCSP02743 223 aa8.92□□□□□ -0.98
SNX6-203ENST00000555416 SMR3BP02814 79 aaPredicted RBP8.91□□□□□ -0.98
SNX6-203ENST00000555416 PRSS1P07477 247 aa8.91□□□□□ -0.98
SNX6-203ENST00000555416 ESDP10768 282 aa8.91□□□□□ -0.98
SNX6-203ENST00000555416 TRBV27A0A0K0K1C4 114 aa8.9□□□□□ -0.98
SNX6-203ENST00000555416 FGF6P10767 208 aa8.9□□□□□ -0.98
SNX6-203ENST00000555416 IGKV3OR2-268A0A0C4DH90 116 aa8.89□□□□□ -0.99
SNX6-203ENST00000555416 ADCYAP1P18509 176 aa8.89□□□□□ -0.99
SNX6-203ENST00000555416 HBBP68871 147 aa8.89□□□□□ -0.99
SNX6-203ENST00000555416 RNASEKQ6P5S7 137 aaKnown RBP8.89□□□□□ -0.99
SNX6-203ENST00000555416 Q6ZSA8 131 aa8.89□□□□□ -0.99
SNX6-203ENST00000555416 FAT1Q14517 4588 aa8.88□□□□□ -0.99
SNX6-203ENST00000555416 DNAH8Q96JB1 4490 aa8.88□□□□□ -0.99
SNX6-203ENST00000555416 SUMO2P61956 95 aaKnown RBP8.88□□□□□ -0.99
SNX6-203ENST00000555416 AMMECR1LQ6DCA0 310 aa8.88□□□□□ -0.99
SNX6-203ENST00000555416 LINC00528Q8N1L1 170 aa8.88□□□□□ -0.99
SNX6-203ENST00000555416 TRAV8-4A0A0B4J246 113 aa8.87□□□□□ -0.99
SNX6-203ENST00000555416 A0A1B0GW15 77 aa8.87□□□□□ -0.99
SNX6-203ENST00000555416 H7C423 109 aa8.87□□□□□ -0.99
SNX6-203ENST00000555416 GAGE12HA6NDE8 117 aa8.86□□□□□ -0.99
SNX6-203ENST00000555416 D6R8Y8 96 aa8.86□□□□□ -0.99
SNX6-203ENST00000555416 VCYO14598 125 aa8.86□□□□□ -0.99
SNX6-203ENST00000555416 PPP1R2P9O14990 202 aa8.86□□□□□ -0.99
SNX6-203ENST00000555416 TNFRSF6BO95407 300 aa8.86□□□□□ -0.99
SNX6-203ENST00000555416 NPYP01303 97 aa8.86□□□□□ -0.99
SNX6-203ENST00000555416 CKS2P33552 79 aa8.86□□□□□ -0.99
SNX6-203ENST00000555416 PNRC1Q12796 327 aaPredicted RBP8.86□□□□□ -0.99
SNX6-203ENST00000555416 TRBV24-1A0A075B6N3 115 aa8.85□□□□□ -0.99
SNX6-203ENST00000555416 LINC00862A6NCI5 91 aa8.85□□□□□ -0.99
SNX6-203ENST00000555416 SLPIP03973 132 aa8.85□□□□□ -0.99
SNX6-203ENST00000555416 C14orf177Q52M58 125 aa8.85□□□□□ -0.99
SNX6-203ENST00000555416 CHCHD10Q8WYQ3 142 aaPredicted RBP8.85□□□□□ -0.99
SNX6-203ENST00000555416 TMEM218A2RU14 115 aa8.84□□□□□ -0.99
SNX6-203ENST00000555416 C7orf77A4D0Y5 90 aa8.84□□□□□ -0.99
SNX6-203ENST00000555416 EPM2AB3EWF7 344 aa8.84□□□□□ -0.99
SNX6-203ENST00000555416 MT-ND4LP03901 98 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms