RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PPP1R17O96001 155 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 RPL36AP83881 106 aaKnown RBP7.55□□□□□ -1.2
SHMT2-218ENST00000555213 GAGE1Q13065 139 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 GAGE4Q13068 117 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 GAGE5Q13069 117 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 PMCHL1Q16048 86 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 GAGE13Q4V321 117 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 RNASEKQ6P5S7 137 aaKnown RBP7.55□□□□□ -1.2
SHMT2-218ENST00000555213 RPL36ALQ969Q0 106 aaKnown RBP7.55□□□□□ -1.2
SHMT2-218ENST00000555213 SMIM2Q9BVW6 85 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 ST20Q9HBF5 79 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 CSMD3Q7Z407 3707 aa7.54□□□□□ -1.2
SHMT2-218ENST00000555213 IGHV1-24A0A0C4DH33 117 aa7.54□□□□□ -1.2
SHMT2-218ENST00000555213 SDHAF1A6NFY7 115 aa7.54□□□□□ -1.2
SHMT2-218ENST00000555213 VCYO14598 125 aa7.54□□□□□ -1.2
SHMT2-218ENST00000555213 TCAPO15273 167 aa7.54□□□□□ -1.2
SHMT2-218ENST00000555213 FABP4P15090 132 aa7.54□□□□□ -1.2
SHMT2-218ENST00000555213 LINC00173Q6ZV60 143 aa7.54□□□□□ -1.2
SHMT2-218ENST00000555213 ATP6V0E2Q8NHE4 81 aa7.54□□□□□ -1.2
SHMT2-218ENST00000555213 NXT2Q9NPJ8 142 aaKnown RBP7.54□□□□□ -1.2
SHMT2-218ENST00000555213 MRPS16Q9Y3D3 137 aaKnown RBP7.54□□□□□ -1.2
SHMT2-218ENST00000555213 TRBV7-3A0A075B6L6 115 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 HSBP1O75506 76 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 TIRAPP58753 221 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 ESRGQ1W209 222 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 FA2HQ7L5A8 372 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 OR10D4PQ8NGN7 298 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 DEFB104AQ8WTQ1 72 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 TMEM18Q96B42 140 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 DNAJC30Q96LL9 226 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 AP5S1Q9NUS5 200 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 LINC00588Q9Y4M8 146 aa7.53□□□□□ -1.2
SHMT2-218ENST00000555213 STARD9Q9P2P6 4700 aa7.52□□□□□ -1.21
SHMT2-218ENST00000555213 TSHBP01222 138 aa7.52□□□□□ -1.21
SHMT2-218ENST00000555213 LINC00694P0DN24 101 aa7.52□□□□□ -1.21
SHMT2-218ENST00000555213 PMCHP20382 165 aa7.52□□□□□ -1.21
SHMT2-218ENST00000555213 FCER1GP30273 86 aa7.52□□□□□ -1.21
SHMT2-218ENST00000555213 AMTP48728 403 aa7.52□□□□□ -1.21
SHMT2-218ENST00000555213 LYPD5Q6UWN5 251 aa7.52□□□□□ -1.21
SHMT2-218ENST00000555213 ZNRF2Q8NHG8 242 aa7.52□□□□□ -1.21
SHMT2-218ENST00000555213 UPK3BQ9BT76 320 aa7.52□□□□□ -1.21
SHMT2-218ENST00000555213 GTSF1LQ9H1H1 148 aa7.52□□□□□ -1.21
SHMT2-218ENST00000555213 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
SHMT2-218ENST00000555213 TRAV8-6A0A0B4J262 113 aa7.51□□□□□ -1.21
SHMT2-218ENST00000555213 S100A2P29034 98 aa7.51□□□□□ -1.21
SHMT2-218ENST00000555213 LAGE3Q14657 143 aa7.51□□□□□ -1.21
SHMT2-218ENST00000555213 Q8N976 141 aa7.51□□□□□ -1.21
SHMT2-218ENST00000555213 DYNC2H1Q8NCM8 4307 aaKnown RBP7.51□□□□□ -1.21
SHMT2-218ENST00000555213 I3L3M4 83 aa7.5□□□□□ -1.21
SHMT2-218ENST00000555213 K7EMI3 77 aa7.5□□□□□ -1.21
SHMT2-218ENST00000555213 UBE2D3P61077 147 aa7.5□□□□□ -1.21
SHMT2-218ENST00000555213 UBE2D2P62837 147 aa7.5□□□□□ -1.21
SHMT2-218ENST00000555213 TTC32Q5I0X7 151 aa7.5□□□□□ -1.21
SHMT2-218ENST00000555213 DAZ4Q86SG3 579 aaKnown RBP7.5□□□□□ -1.21
SHMT2-218ENST00000555213 DAZ3Q9NR90 486 aaKnown RBP7.5□□□□□ -1.21
SHMT2-218ENST00000555213 RYR2Q92736 4967 aa7.5□□□□□ -1.21
SHMT2-218ENST00000555213 TMEM97Q5BJF2 176 aa7.49□□□□□ -1.21
SHMT2-218ENST00000555213 PYY3Q5JQD4 70 aa7.49□□□□□ -1.21
SHMT2-218ENST00000555213 LELP1Q5T871 98 aa7.49□□□□□ -1.21
SHMT2-218ENST00000555213 NTM-AS1Q6ZSK4 140 aa7.49□□□□□ -1.21
SHMT2-218ENST00000555213 SPATA12Q7Z6I5 190 aa7.49□□□□□ -1.21
SHMT2-218ENST00000555213 FAM104AQ969W3 186 aa7.49□□□□□ -1.21
SHMT2-218ENST00000555213 Q9H8V8 135 aa7.49□□□□□ -1.21
SHMT2-218ENST00000555213 IGHV3-38A0A0C4DH36 116 aa7.48□□□□□ -1.21
SHMT2-218ENST00000555213 SIVA1O15304 175 aa7.48□□□□□ -1.21
SHMT2-218ENST00000555213 HBDP02042 147 aa7.48□□□□□ -1.21
SHMT2-218ENST00000555213 C3orf79P0CE67 100 aa7.48□□□□□ -1.21
SHMT2-218ENST00000555213 TOMM6Q96B49 74 aa7.48□□□□□ -1.21
SHMT2-218ENST00000555213 CHCHD7Q9BUK0 85 aa7.48□□□□□ -1.21
SHMT2-218ENST00000555213 ALMS1Q8TCU4 4167 aa7.47□□□□□ -1.21
SHMT2-218ENST00000555213 TRAV9-2A0A087WT02 112 aa7.47□□□□□ -1.21
SHMT2-218ENST00000555213 LEPROTL1O95214 131 aa7.47□□□□□ -1.21
SHMT2-218ENST00000555213 AKR1D1P51857 326 aa7.47□□□□□ -1.21
SHMT2-218ENST00000555213 JOSD1Q15040 202 aaPredicted RBP7.47□□□□□ -1.21
SHMT2-218ENST00000555213 ORMDL2Q53FV1 153 aa7.47□□□□□ -1.21
SHMT2-218ENST00000555213 NBDYA0A0U1RRE5 68 aa7.46□□□□□ -1.22
SHMT2-218ENST00000555213 IGIPA6NJ69 53 aa7.46□□□□□ -1.22
SHMT2-218ENST00000555213 K7EP13 123 aa7.46□□□□□ -1.22
SHMT2-218ENST00000555213 PKIAP61925 76 aa7.46□□□□□ -1.22
SHMT2-218ENST00000555213 RPL39P62891 51 aaKnown RBP7.46□□□□□ -1.22
SHMT2-218ENST00000555213 CDPF1Q6NVV7 123 aa7.46□□□□□ -1.22
SHMT2-218ENST00000555213 C2orf66Q6UXQ4 117 aa7.46□□□□□ -1.22
SHMT2-218ENST00000555213 WFDC10BQ8IUB3 73 aa7.46□□□□□ -1.22
SHMT2-218ENST00000555213 C20orf203Q8NBC4 194 aa7.46□□□□□ -1.22
SHMT2-218ENST00000555213 KIR2DL4Q99706 377 aa7.46□□□□□ -1.22
SHMT2-218ENST00000555213 TRBV25-1A0A075B6N4 114 aa7.45□□□□□ -1.22
SHMT2-218ENST00000555213 TRBV6-8A0A0A6YYG3 113 aa7.45□□□□□ -1.22
SHMT2-218ENST00000555213 M0R2N4 97 aa7.45□□□□□ -1.22
SHMT2-218ENST00000555213 DNAH10OSP0CZ25 163 aa7.45□□□□□ -1.22
SHMT2-218ENST00000555213 COTL1Q14019 142 aa7.45□□□□□ -1.22
SHMT2-218ENST00000555213 C10orf126Q8N4M7 172 aa7.45□□□□□ -1.22
SHMT2-218ENST00000555213 SYS1-DBNDD2H3BUS1 97 aa7.44□□□□□ -1.22
SHMT2-218ENST00000555213 BTF3P20290 206 aaKnown RBP7.44□□□□□ -1.22
SHMT2-218ENST00000555213 LINC01556Q5JQF7 62 aa7.44□□□□□ -1.22
SHMT2-218ENST00000555213 LINC00518Q8N0U6 118 aa7.44□□□□□ -1.22
SHMT2-218ENST00000555213 CHCHD5Q9BSY4 110 aa7.44□□□□□ -1.22
SHMT2-218ENST00000555213 A0A087WX48 190 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms