RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 HMSDA8MTL9 139 aa11.45□□□□□ -0.58
PRKCH-210ENST00000554835 RPS20P60866 119 aaKnown RBP11.45□□□□□ -0.58
PRKCH-210ENST00000554835 LYZL1Q6UWQ5 148 aa11.45□□□□□ -0.58
PRKCH-210ENST00000554835 MANBALQ9NQG1 85 aa11.45□□□□□ -0.58
PRKCH-210ENST00000554835 TRBV20OR9-2A0A075B6H5 130 aa11.44□□□□□ -0.58
PRKCH-210ENST00000554835 NTF3P20783 257 aa11.44□□□□□ -0.58
PRKCH-210ENST00000554835 COX6A2Q02221 97 aa11.44□□□□□ -0.58
PRKCH-210ENST00000554835 RGS21Q2M5E4 152 aa11.44□□□□□ -0.58
PRKCH-210ENST00000554835 GAGE12HA6NDE8 117 aa11.43□□□□□ -0.58
PRKCH-210ENST00000554835 F2Z2F3 143 aa11.43□□□□□ -0.58
PRKCH-210ENST00000554835 ODF1Q14990 250 aa11.43□□□□□ -0.58
PRKCH-210ENST00000554835 PRSS3P2Q8NHM4 247 aa11.43□□□□□ -0.58
PRKCH-210ENST00000554835 DPH3P1Q9H4G8 78 aa11.43□□□□□ -0.58
PRKCH-210ENST00000554835 TRAV1-1A0A0B4J248 108 aa11.42□□□□□ -0.58
PRKCH-210ENST00000554835 KANTRA0A1W2PQU2 76 aa11.42□□□□□ -0.58
PRKCH-210ENST00000554835 UBE2L6O14933 153 aa11.42□□□□□ -0.58
PRKCH-210ENST00000554835 TRGC1P0CF51 173 aa11.42□□□□□ -0.58
PRKCH-210ENST00000554835 AMTP48728 403 aa11.42□□□□□ -0.58
PRKCH-210ENST00000554835 SULT1A2P50226 295 aa11.42□□□□□ -0.58
PRKCH-210ENST00000554835 IGKV3OR2-268A0A0C4DH90 116 aa11.41□□□□□ -0.58
PRKCH-210ENST00000554835 GNG4P50150 75 aa11.41□□□□□ -0.58
PRKCH-210ENST00000554835 COTL1Q14019 142 aa11.41□□□□□ -0.58
PRKCH-210ENST00000554835 HIGD2BQ4VC39 106 aa11.41□□□□□ -0.58
PRKCH-210ENST00000554835 WDR73Q6P4I2 378 aa11.41□□□□□ -0.58
PRKCH-210ENST00000554835 C9orf62Q8N4C0 152 aa11.41□□□□□ -0.58
PRKCH-210ENST00000554835 TRAV26-2A0A0B4J265 109 aa11.4□□□□□ -0.58
PRKCH-210ENST00000554835 IFNA1P01562 189 aa11.4□□□□□ -0.58
PRKCH-210ENST00000554835 CTRLP40313 264 aa11.4□□□□□ -0.58
PRKCH-210ENST00000554835 RPS10P46783 165 aaKnown RBP11.4□□□□□ -0.58
PRKCH-210ENST00000554835 GATD1Q8NB37 220 aa11.4□□□□□ -0.58
PRKCH-210ENST00000554835 SMIM12Q96EX1 92 aa11.4□□□□□ -0.58
PRKCH-210ENST00000554835 NDUFS6O75380 124 aaKnown RBP11.39□□□□□ -0.59
PRKCH-210ENST00000554835 Q6ZNX1 250 aa11.39□□□□□ -0.59
PRKCH-210ENST00000554835 CHCHD10Q8WYQ3 142 aaPredicted RBP11.39□□□□□ -0.59
PRKCH-210ENST00000554835 CNFNQ9BYD5 112 aa11.39□□□□□ -0.59
PRKCH-210ENST00000554835 IGKV2-24A0A0C4DH68 120 aa11.38□□□□□ -0.59
PRKCH-210ENST00000554835 XKRY2A2RUG3 117 aa11.38□□□□□ -0.59
PRKCH-210ENST00000554835 PRR3P79522 188 aaKnown RBP11.38□□□□□ -0.59
PRKCH-210ENST00000554835 MAJINQ3KP22 176 aa11.38□□□□□ -0.59
PRKCH-210ENST00000554835 CFAP161Q6P656 301 aa11.38□□□□□ -0.59
PRKCH-210ENST00000554835 NUDT10Q8NFP7 164 aa11.38□□□□□ -0.59
PRKCH-210ENST00000554835 C7orf33Q8WU49 177 aa11.38□□□□□ -0.59
PRKCH-210ENST00000554835 NUDT11Q96G61 164 aa11.38□□□□□ -0.59
PRKCH-210ENST00000554835 LINC01600Q96MT4 127 aa11.38□□□□□ -0.59
PRKCH-210ENST00000554835 EIF5AP63241 154 aaKnown RBP11.37□□□□□ -0.59
PRKCH-210ENST00000554835 MEF2BQ02080 365 aaPredicted RBP11.37□□□□□ -0.59
PRKCH-210ENST00000554835 GTSF1Q8WW33 167 aa11.37□□□□□ -0.59
PRKCH-210ENST00000554835 RPL39LQ96EH5 51 aaKnown RBP11.37□□□□□ -0.59
PRKCH-210ENST00000554835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-210ENST00000554835 GVQW2A0A096LPI5 108 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-210ENST00000554835 IGKV2-29A2NJV5 120 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-210ENST00000554835 FOXA3P55318 350 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-210ENST00000554835 TWIST1Q15672 202 aa11.36□□□□□ -0.59
PRKCH-210ENST00000554835 STPG4Q8N801 248 aa11.36□□□□□ -0.59
PRKCH-210ENST00000554835 MED9Q9NWA0 146 aa11.36□□□□□ -0.59
PRKCH-210ENST00000554835 A0A096LNI7 61 aa11.35□□□□□ -0.59
PRKCH-210ENST00000554835 PDE6DO43924 150 aa11.35□□□□□ -0.59
PRKCH-210ENST00000554835 FOXI1Q12951 378 aa11.35□□□□□ -0.59
PRKCH-210ENST00000554835 LYPD6BQ8NI32 183 aa11.35□□□□□ -0.59
PRKCH-210ENST00000554835 RNASE7Q9H1E1 156 aaKnown RBP11.34□□□□□ -0.59
PRKCH-210ENST00000554835 K7EN84 100 aa11.33□□□□□ -0.6
PRKCH-210ENST00000554835 FGF6P10767 208 aa11.33□□□□□ -0.6
PRKCH-210ENST00000554835 AMMECR1LQ6DCA0 310 aa11.33□□□□□ -0.6
PRKCH-210ENST00000554835 RNASEKQ6P5S7 137 aaKnown RBP11.33□□□□□ -0.6
PRKCH-210ENST00000554835 FAM231BA6NCW3 169 aa11.32□□□□□ -0.6
PRKCH-210ENST00000554835 NCR2O95944 276 aa11.32□□□□□ -0.6
PRKCH-210ENST00000554835 BCL2P10415 239 aa11.32□□□□□ -0.6
PRKCH-210ENST00000554835 LINC00526Q96FQ7 95 aa11.32□□□□□ -0.6
PRKCH-210ENST00000554835 RPP21Q9H633 154 aaKnown RBP11.32□□□□□ -0.6
PRKCH-210ENST00000554835 BIN3Q9NQY0 253 aa11.32□□□□□ -0.6
PRKCH-210ENST00000554835 H7C423 109 aa11.31□□□□□ -0.6
PRKCH-210ENST00000554835 OCC1Q8TAD7 63 aa11.31□□□□□ -0.6
PRKCH-210ENST00000554835 A0A0J9YXV3 536 aa11.3□□□□□ -0.6
PRKCH-210ENST00000554835 SDHAF1A6NFY7 115 aa11.3□□□□□ -0.6
PRKCH-210ENST00000554835 APCSP02743 223 aa11.3□□□□□ -0.6
PRKCH-210ENST00000554835 KRTAP10-8P60410 259 aa11.3□□□□□ -0.6
PRKCH-210ENST00000554835 TEX46H3BTG2 121 aa11.29□□□□□ -0.6
PRKCH-210ENST00000554835 GAS8-AS1O95177 125 aa11.29□□□□□ -0.6
PRKCH-210ENST00000554835 XCL1P47992 114 aa11.29□□□□□ -0.6
PRKCH-210ENST00000554835 OR5A1Q8NGJ0 315 aa11.29□□□□□ -0.6
PRKCH-210ENST00000554835 LINC00959A0A1B0GUT2 108 aa11.28□□□□□ -0.6
PRKCH-210ENST00000554835 SRSF9Q13242 221 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRKCH-210ENST00000554835 LPAP08519 4548 aa11.28□□□□□ -0.6
PRKCH-210ENST00000554835 CCL25O15444 150 aa11.27□□□□□ -0.61
PRKCH-210ENST00000554835 ESDP10768 282 aa11.27□□□□□ -0.61
PRKCH-210ENST00000554835 ZNF25P17030 456 aaPredicted RBP11.26□□□□□ -0.61
PRKCH-210ENST00000554835 EIF5AL1Q6IS14 154 aaKnown RBP11.26□□□□□ -0.61
PRKCH-210ENST00000554835 SPINK6Q6UWN8 80 aa11.26□□□□□ -0.61
PRKCH-210ENST00000554835 TRBV6-5A0A0K0K1A5 114 aa11.25□□□□□ -0.61
PRKCH-210ENST00000554835 I3L3M4 83 aa11.25□□□□□ -0.61
PRKCH-210ENST00000554835 TSHBP01222 138 aa11.25□□□□□ -0.61
PRKCH-210ENST00000554835 TEX261Q6UWH6 196 aa11.25□□□□□ -0.61
PRKCH-210ENST00000554835 CARD19Q96LW7 228 aa11.25□□□□□ -0.61
PRKCH-210ENST00000554835 LINC00474Q9P2X8 69 aa11.25□□□□□ -0.61
PRKCH-210ENST00000554835 IGHV1-58A0A0C4DH39 117 aa11.24□□□□□ -0.61
PRKCH-210ENST00000554835 PMCHP20382 165 aa11.24□□□□□ -0.61
PRKCH-210ENST00000554835 SMIM15Q7Z3B0 74 aa11.23□□□□□ -0.61
PRKCH-210ENST00000554835 CDC42SE2Q9NRR3 84 aa11.23□□□□□ -0.61
PRKCH-210ENST00000554835 TMEM242Q9NWH2 141 aa11.23□□□□□ -0.61
PRKCH-210ENST00000554835 TMEM101Q96IK0 257 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms