RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 TMEM18Q96B42 140 aa5.54□□□□□ -1.52
LINC01397-201ENST00000554808 YPEL4Q96NS1 127 aa5.54□□□□□ -1.52
LINC01397-201ENST00000554808 SMIM2Q9BVW6 85 aa5.54□□□□□ -1.52
LINC01397-201ENST00000554808 MRPL18Q9H0U6 180 aaKnown RBP5.54□□□□□ -1.52
LINC01397-201ENST00000554808 MAP1LC3AQ9H492 121 aa5.54□□□□□ -1.52
LINC01397-201ENST00000554808 Q9H8V8 135 aa5.54□□□□□ -1.52
LINC01397-201ENST00000554808 TRAPPC1Q9Y5R8 145 aa5.54□□□□□ -1.52
LINC01397-201ENST00000554808 KMT2AQ03164 3969 aa5.54□□□□□ -1.52
LINC01397-201ENST00000554808 IGHV3-38A0A0C4DH36 116 aa5.53□□□□□ -1.52
LINC01397-201ENST00000554808 UBE2L6O14933 153 aa5.53□□□□□ -1.52
LINC01397-201ENST00000554808 DNAH10OSP0CZ25 163 aa5.53□□□□□ -1.52
LINC01397-201ENST00000554808 G0S2P27469 103 aa5.53□□□□□ -1.52
LINC01397-201ENST00000554808 RPS10P46783 165 aaKnown RBP5.53□□□□□ -1.52
LINC01397-201ENST00000554808 AMTP48728 403 aa5.53□□□□□ -1.52
LINC01397-201ENST00000554808 FABP9Q0Z7S8 132 aa5.53□□□□□ -1.52
LINC01397-201ENST00000554808 LINC01556Q5JQF7 62 aa5.53□□□□□ -1.52
LINC01397-201ENST00000554808 NXT2Q9NPJ8 142 aaKnown RBP5.53□□□□□ -1.52
LINC01397-201ENST00000554808 Q9UF83 564 aa5.53□□□□□ -1.52
LINC01397-201ENST00000554808 A0A087WX48 190 aa5.52□□□□□ -1.53
LINC01397-201ENST00000554808 LINC01549A6NIU2 74 aa5.52□□□□□ -1.53
LINC01397-201ENST00000554808 SMKR1H3BMG3 65 aa5.52□□□□□ -1.53
LINC01397-201ENST00000554808 NPYP01303 97 aa5.52□□□□□ -1.53
LINC01397-201ENST00000554808 RAB5AP20339 215 aa5.52□□□□□ -1.53
LINC01397-201ENST00000554808 FCER1GP30273 86 aa5.52□□□□□ -1.53
LINC01397-201ENST00000554808 LAGE3Q14657 143 aa5.52□□□□□ -1.53
LINC01397-201ENST00000554808 TMEM243Q9BU79 118 aa5.52□□□□□ -1.53
LINC01397-201ENST00000554808 DNAH10Q8IVF4 4471 aa5.51□□□□□ -1.53
LINC01397-201ENST00000554808 A0A1B0GUV1 79 aa5.51□□□□□ -1.53
LINC01397-201ENST00000554808 ZNF25P17030 456 aaPredicted RBP5.51□□□□□ -1.53
LINC01397-201ENST00000554808 ORMDL2Q53FV1 153 aa5.51□□□□□ -1.53
LINC01397-201ENST00000554808 NIT1Q86X76 327 aa5.51□□□□□ -1.53
LINC01397-201ENST00000554808 WFDC10BQ8IUB3 73 aa5.51□□□□□ -1.53
LINC01397-201ENST00000554808 Q8N8P6 123 aa5.51□□□□□ -1.53
LINC01397-201ENST00000554808 CHCHD5Q9BSY4 110 aa5.51□□□□□ -1.53
LINC01397-201ENST00000554808 ALKBH7Q9BT30 221 aaPredicted RBP5.51□□□□□ -1.53
LINC01397-201ENST00000554808 HECTD4Q9Y4D8 3996 aa5.5□□□□□ -1.53
LINC01397-201ENST00000554808 NBDYA0A0U1RRE5 68 aa5.5□□□□□ -1.53
LINC01397-201ENST00000554808 GAS8-AS1O95177 125 aa5.5□□□□□ -1.53
LINC01397-201ENST00000554808 TSHBP01222 138 aa5.5□□□□□ -1.53
LINC01397-201ENST00000554808 RAB5BP61020 215 aa5.5□□□□□ -1.53
LINC01397-201ENST00000554808 NTM-AS1Q6ZSK4 140 aa5.5□□□□□ -1.53
LINC01397-201ENST00000554808 DNAH6Q9C0G6 4158 aa5.49□□□□□ -1.53
LINC01397-201ENST00000554808 VPS13DQ5THJ4 4388 aa5.49□□□□□ -1.53
LINC01397-201ENST00000554808 COLCA2A8K830 154 aa5.49□□□□□ -1.53
LINC01397-201ENST00000554808 TMEM262E9PQX1 116 aa5.49□□□□□ -1.53
LINC01397-201ENST00000554808 ESDP10768 282 aa5.49□□□□□ -1.53
LINC01397-201ENST00000554808 Q0VG73 95 aa5.49□□□□□ -1.53
LINC01397-201ENST00000554808 KIAA1644Q3SXP7 199 aa5.49□□□□□ -1.53
LINC01397-201ENST00000554808 AMMECR1LQ6DCA0 310 aa5.49□□□□□ -1.53
LINC01397-201ENST00000554808 NFE4Q86UQ8 179 aa5.49□□□□□ -1.53
LINC01397-201ENST00000554808 PRSS3P2Q8NHM4 247 aa5.49□□□□□ -1.53
LINC01397-201ENST00000554808 CSDC2Q9Y534 153 aaKnown RBP5.49□□□□□ -1.53
LINC01397-201ENST00000554808 IGLV2-18A0A075B6J9 118 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 TRAV8-3A0A0A6YYJ7 113 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 CRPP02741 224 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 NPSP0C0P6 89 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 Q6ZR54 194 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 FA2HQ7L5A8 372 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 MRPL52Q86TS9 123 aaKnown RBP5.48□□□□□ -1.53
LINC01397-201ENST00000554808 C20orf203Q8NBC4 194 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 C18orf32Q8TCD1 76 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 RMI2Q96E14 147 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 TMEM101Q96IK0 257 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 TIMM21Q9BVV7 248 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 COX11Q9Y6N1 276 aa5.48□□□□□ -1.53
LINC01397-201ENST00000554808 PCLOQ9Y6V0 5065 aa5.47□□□□□ -1.53
LINC01397-201ENST00000554808 LOC389332A0A1B0GUA5 103 aa5.47□□□□□ -1.53
LINC01397-201ENST00000554808 LINC01546A6NGU7 62 aa5.47□□□□□ -1.53
LINC01397-201ENST00000554808 IBA57-AS1B1ANH7 110 aa5.47□□□□□ -1.53
LINC01397-201ENST00000554808 SCO1O75880 301 aa5.47□□□□□ -1.53
LINC01397-201ENST00000554808 ANGP03950 147 aaKnown RBP5.47□□□□□ -1.53
LINC01397-201ENST00000554808 TRGC2P03986 189 aa5.47□□□□□ -1.53
LINC01397-201ENST00000554808 IFI27P40305 119 aaPredicted RBP5.47□□□□□ -1.53
LINC01397-201ENST00000554808 MPV17L2Q567V2 206 aa5.47□□□□□ -1.53
LINC01397-201ENST00000554808 DGAT2L7PQ6IED9 249 aa5.47□□□□□ -1.53
LINC01397-201ENST00000554808 SPANXA1Q9NS26 97 aa5.47□□□□□ -1.53
LINC01397-201ENST00000554808 AP5S1Q9NUS5 200 aa5.47□□□□□ -1.53
LINC01397-201ENST00000554808 CYSLTR1Q9Y271 337 aa5.47□□□□□ -1.53
LINC01397-201ENST00000554808 TRAV8-4A0A0B4J246 113 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 IGHV3-30P01768 117 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 IGHV3-33P01772 117 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 IGHV3-30-3P0DP02 117 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 IGHV3-30-5P0DP03 117 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 FGF6P10767 208 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 RBX1P62877 108 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 GAGE6Q13070 117 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 MIAQ16674 131 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 PAPPA-AS1Q5QFB9 102 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 C1orf134Q5TEV5 83 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 RNASEKQ6P5S7 137 aaKnown RBP5.46□□□□□ -1.54
LINC01397-201ENST00000554808 C6orf223Q8N319 242 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 OR5A1Q8NGJ0 315 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 CHCHD1Q96BP2 118 aaKnown RBP5.46□□□□□ -1.54
LINC01397-201ENST00000554808 PYGO1Q9Y3Y4 419 aa5.46□□□□□ -1.54
LINC01397-201ENST00000554808 RYR1P21817 5038 aa5.45□□□□□ -1.54
LINC01397-201ENST00000554808 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.45□□□□□ -1.54
LINC01397-201ENST00000554808 IGKV2-29A2NJV5 120 aaPredicted RBP5.45□□□□□ -1.54
LINC01397-201ENST00000554808 CCL25O15444 150 aa5.45□□□□□ -1.54
LINC01397-201ENST00000554808 LINC00614P0C842 121 aa5.45□□□□□ -1.54
LINC01397-201ENST00000554808 MRPS36P82909 103 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms