RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 PIK3CD-AS1Q5SR53 167 aa8.21□□□□□ -1.1
SRP54-205ENST00000554803 DLX4Q92988 240 aaPredicted RBP8.21□□□□□ -1.1
SRP54-205ENST00000554803 PRADC1Q9BSG0 188 aa8.21□□□□□ -1.1
SRP54-205ENST00000554803 RHPN1-AS1Q9BWJ2 59 aa8.21□□□□□ -1.1
SRP54-205ENST00000554803 ZNF815PA8K554 130 aa8.2□□□□□ -1.1
SRP54-205ENST00000554803 H3BMG7 143 aa8.2□□□□□ -1.1
SRP54-205ENST00000554803 MGPP08493 103 aa8.2□□□□□ -1.1
SRP54-205ENST00000554803 RNASE4P34096 147 aaKnown RBP8.2□□□□□ -1.1
SRP54-205ENST00000554803 SNRPD3P62318 126 aaKnown RBP8.2□□□□□ -1.1
SRP54-205ENST00000554803 RPL24P83731 157 aaKnown RBP8.2□□□□□ -1.1
SRP54-205ENST00000554803 SCGB1D4Q6XE38 83 aa8.2□□□□□ -1.1
SRP54-205ENST00000554803 C14orf178Q8N769 122 aaPredicted RBP8.2□□□□□ -1.1
SRP54-205ENST00000554803 MAPKAPK5-AS1Q8N8E1 139 aa8.2□□□□□ -1.1
SRP54-205ENST00000554803 SIGMAR1Q99720 223 aa8.2□□□□□ -1.1
SRP54-205ENST00000554803 SPATA25Q9BR10 227 aa8.2□□□□□ -1.1
SRP54-205ENST00000554803 KIAA1109Q2LD37 5005 aa8.19□□□□□ -1.1
SRP54-205ENST00000554803 IGIPA6NJ69 53 aa8.19□□□□□ -1.1
SRP54-205ENST00000554803 IGHV3-11P01762 117 aa8.19□□□□□ -1.1
SRP54-205ENST00000554803 TCTAP57738 103 aa8.19□□□□□ -1.1
SRP54-205ENST00000554803 LINC00315P59091 139 aa8.19□□□□□ -1.1
SRP54-205ENST00000554803 C18orf65Q6ZTR6 163 aa8.19□□□□□ -1.1
SRP54-205ENST00000554803 NFE4Q86UQ8 179 aa8.19□□□□□ -1.1
SRP54-205ENST00000554803 MTURNQ8N3F0 131 aa8.19□□□□□ -1.1
SRP54-205ENST00000554803 DNAH10Q8IVF4 4471 aa8.19□□□□□ -1.1
SRP54-205ENST00000554803 TRGV11A0A075B6L2 103 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 IGHV3OR16-13A0A075B7E8 117 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 IGHV3-49A0A0A0MS15 119 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 IGHV3-74A0A0B4J1X5 117 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 A0A0J9YX75 114 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 TEX48A0A1B0GUV7 120 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 TMEM238C9JI98 176 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 TRBV12-3P01733 135 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 SRSF9Q13242 221 aaKnown RBP eCLIP8.18□□□□□ -1.1
SRP54-205ENST00000554803 ZNF876PQ49A33 203 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 KHDC1LQ5JSQ8 128 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 UNQ9165/PRO28630Q6UXU0 137 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 ZFP2Q6ZN57 461 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 TRPT1Q86TN4 253 aaKnown RBP8.18□□□□□ -1.1
SRP54-205ENST00000554803 C9orf85Q96MD7 179 aa8.18□□□□□ -1.1
SRP54-205ENST00000554803 ZNF256Q9Y2P7 627 aaPredicted RBP8.18□□□□□ -1.1
SRP54-205ENST00000554803 K7ERJ3 54 aa8.17□□□□□ -1.1
SRP54-205ENST00000554803 ELANEP08246 267 aa8.17□□□□□ -1.1
SRP54-205ENST00000554803 RPL11P62913 178 aaKnown RBP8.17□□□□□ -1.1
SRP54-205ENST00000554803 SBSPONQ8IVN8 264 aa8.17□□□□□ -1.1
SRP54-205ENST00000554803 DCANP1Q8TF63 244 aa8.17□□□□□ -1.1
SRP54-205ENST00000554803 PTH2Q96A98 100 aa8.17□□□□□ -1.1
SRP54-205ENST00000554803 PLEKHB2Q96CS7 222 aa8.17□□□□□ -1.1
SRP54-205ENST00000554803 RPL39LQ96EH5 51 aaKnown RBP8.17□□□□□ -1.1
SRP54-205ENST00000554803 MRPL16Q9NX20 251 aaKnown RBP8.17□□□□□ -1.1
SRP54-205ENST00000554803 MDFICQ9P1T7 246 aa8.17□□□□□ -1.1
SRP54-205ENST00000554803 TRAV2A0A0B4J234 112 aa8.16□□□□□ -1.1
SRP54-205ENST00000554803 PRB4P10163 310 aaPredicted RBP8.16□□□□□ -1.1
SRP54-205ENST00000554803 UBE2D3P61077 147 aa8.16□□□□□ -1.1
SRP54-205ENST00000554803 UBE2D2P62837 147 aa8.16□□□□□ -1.1
SRP54-205ENST00000554803 SLC25A29Q8N8R3 303 aa8.16□□□□□ -1.1
SRP54-205ENST00000554803 NAA38Q9BRA0 125 aaKnown RBP8.16□□□□□ -1.1
SRP54-205ENST00000554803 TTTY13Q9BZ97 58 aa8.16□□□□□ -1.1
SRP54-205ENST00000554803 PRO0461Q9UI25 63 aa8.16□□□□□ -1.1
SRP54-205ENST00000554803 TP53TG1Q9Y2A0 90 aa8.16□□□□□ -1.1
SRP54-205ENST00000554803 IGLV4-69A0A075B6H9 119 aa8.15□□□□□ -1.1
SRP54-205ENST00000554803 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.15□□□□□ -1.1
SRP54-205ENST00000554803 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.1
SRP54-205ENST00000554803 SDHAF1A6NFY7 115 aa8.15□□□□□ -1.1
SRP54-205ENST00000554803 CIDEAO60543 219 aa8.15□□□□□ -1.1
SRP54-205ENST00000554803 CD7P09564 240 aa8.15□□□□□ -1.1
SRP54-205ENST00000554803 SUMO4Q6EEV6 95 aa8.15□□□□□ -1.1
SRP54-205ENST00000554803 C1QTNF4Q9BXJ3 329 aa8.15□□□□□ -1.1
SRP54-205ENST00000554803 PGPEP1Q9NXJ5 209 aa8.15□□□□□ -1.1
SRP54-205ENST00000554803 PYGO1Q9Y3Y4 419 aa8.15□□□□□ -1.1
SRP54-205ENST00000554803 KMT2AQ03164 3969 aa8.15□□□□□ -1.11
SRP54-205ENST00000554803 IGHV3-16A0A0C4DH30 117 aa8.14□□□□□ -1.11
SRP54-205ENST00000554803 A0A0J9YY99 117 aa8.14□□□□□ -1.11
SRP54-205ENST00000554803 LEPROTO15243 131 aa8.14□□□□□ -1.11
SRP54-205ENST00000554803 CRYGDP07320 174 aa8.14□□□□□ -1.11
SRP54-205ENST00000554803 LGALS3P17931 250 aaKnown RBP8.14□□□□□ -1.11
SRP54-205ENST00000554803 DEFB136Q30KP8 78 aa8.14□□□□□ -1.11
SRP54-205ENST00000554803 CFAP126Q5VTH2 177 aa8.14□□□□□ -1.11
SRP54-205ENST00000554803 MORN3Q6PF18 240 aaPredicted RBP8.14□□□□□ -1.11
SRP54-205ENST00000554803 RNF183Q96D59 192 aa8.14□□□□□ -1.11
SRP54-205ENST00000554803 IGHV1OR15-1A0A075B7D0 117 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 A0A0B4J2C4 111 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 A0A1B0GV72 72 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 TMEM262E9PQX1 116 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 I3L3M4 83 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 GNRH2O43555 120 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 APOMO95445 188 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 C10orf126Q8N4M7 172 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 KLHL30-AS1Q8NEE0 82 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 SVIPQ8NHG7 77 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 PPDPFLQ8WWR9 84 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 UBE2E2Q96LR5 201 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 LINC01600Q96MT4 127 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
SRP54-205ENST00000554803 F5H697 171 aa8.12□□□□□ -1.11
SRP54-205ENST00000554803 J3QQQ9 107 aa8.12□□□□□ -1.11
SRP54-205ENST00000554803 K7EQG2 157 aa8.12□□□□□ -1.11
SRP54-205ENST00000554803 M0QY20 66 aa8.12□□□□□ -1.11
SRP54-205ENST00000554803 CCL24O00175 119 aa8.12□□□□□ -1.11
SRP54-205ENST00000554803 WFDC2Q14508 124 aa8.12□□□□□ -1.11
SRP54-205ENST00000554803 LINC00467Q9BRT7 94 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms