RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 NXT2Q9NPJ8 142 aaKnown RBP3.38□□□□□ -1.87
PPP4R3A-204ENST00000554574 TIMM8BQ9Y5J9 83 aaPredicted RBP3.38□□□□□ -1.87
PPP4R3A-204ENST00000554574 TRAV26-1A0A087WT03 109 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 RBMY1BA6NDE4 496 aaKnown RBP3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 RBMY1EA6NEQ0 496 aaKnown RBP3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 OR11H12B2RN74 326 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 GAS8-AS1O95177 125 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 PPP1R17O96001 155 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 RBMY1DP0C7P1 496 aaKnown RBP3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 KRTAP10-3P60369 221 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 PMCHL1Q16048 86 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 NSUN5P1Q3KNT7 163 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 ZNF664Q8N3J9 261 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 POM121L12Q8N7R1 296 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 LINC00467Q9BRT7 94 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 MCRIP2Q9BUT9 160 aaKnown RBP3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 HSPB8Q9UJY1 196 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 KIF25-AS1Q9Y6Z4 181 aa3.37□□□□□ -1.87
PPP4R3A-204ENST00000554574 IGLV2-18A0A075B6J9 118 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 A0A096LNJ9 63 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 KIR2DL5BA0A0G2JN68 375 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 KIR2DL5BA0A0G2JPC4 375 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 LOC389332A0A1B0GUA5 103 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 G3V4G9 280 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 SYS1-DBNDD2H3BUS1 97 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 HBDP02042 147 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 RBMY1A1P0DJD3 496 aaKnown RBP3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 RBMY1CP0DJD4 496 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 LINC00315P59091 139 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 RBMY1FQ15415 496 aaKnown RBP3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 SPATA12Q7Z6I5 190 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 KIR2DL5AQ8N109 375 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 C14orf178Q8N769 122 aaPredicted RBP3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 Q8N8P6 123 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 MDFICQ9P1T7 246 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 TRAV26-2A0A0B4J265 109 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 LINC00587B1AMM8 73 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 K7EMI3 77 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 INSP01308 110 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 SMIM17P0DL12 118 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 GATA1P15976 413 aaPredicted RBP3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 NUTF2P61970 127 aaKnown RBP3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 ZC2HC1BQ5TFG8 222 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 LINC00173Q6ZV60 143 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 RASL10AQ92737 203 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 C20orf78Q9BR46 151 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 VAMP8Q9BV40 100 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 MAP1LC3CQ9BXW4 147 aa3.36□□□□□ -1.87
PPP4R3A-204ENST00000554574 C20orf202A1L168 122 aa3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 DDTP30046 118 aa3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 FCER1GP30273 86 aa3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 INSL3P51460 131 aa3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 FXYD7P58549 80 aa3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 RPL32P62910 135 aaKnown RBP3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 Q8N377 158 aa3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 PTH2Q96A98 100 aa3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 CITED1Q99966 193 aa3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 SMIM2Q9BVW6 85 aa3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 PRO1933Q9H354 126 aa3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 STAB1Q9NY15 2570 aa3.35□□□□□ -1.87
PPP4R3A-204ENST00000554574 M0R2P5 195 aa3.34□□□□□ -1.87
PPP4R3A-204ENST00000554574 CRYGDP07320 174 aa3.34□□□□□ -1.87
PPP4R3A-204ENST00000554574 MGPP08493 103 aa3.34□□□□□ -1.87
PPP4R3A-204ENST00000554574 LAGE3Q14657 143 aa3.34□□□□□ -1.87
PPP4R3A-204ENST00000554574 LINC01545Q5VT33 79 aa3.34□□□□□ -1.87
PPP4R3A-204ENST00000554574 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.34□□□□□ -1.87
PPP4R3A-204ENST00000554574 C11orf72Q8NBR9 251 aa3.34□□□□□ -1.87
PPP4R3A-204ENST00000554574 MAST4O15021 2626 aa3.34□□□□□ -1.87
PPP4R3A-204ENST00000554574 TRAV9-2A0A087WT02 112 aa3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 TRBV6-5A0A0K0K1A5 114 aa3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 NDUFAF8A1L188 74 aa3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 H7C423 109 aa3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 HTN1P15515 57 aa3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 SEC61GP60059 68 aa3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 ORMDL2Q53FV1 153 aa3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 IFI27L1Q96BM0 104 aa3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 RPL39LQ96EH5 51 aaKnown RBP3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 LINC01587Q99440 93 aa3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 EDA2RQ9HAV5 297 aa3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 XCL2Q9UBD3 114 aa3.34□□□□□ -1.88
PPP4R3A-204ENST00000554574 TRBV27A0A0K0K1C4 114 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 LINC01549A6NIU2 74 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 A8MWV9 139 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 H0Y8G0 127 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 M0QY20 66 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 GIG44P09565 113 aaPredicted RBP3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 POLR2KP53803 58 aaKnown RBP3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 ZNF56Q15929 161 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 LGALS9BQ3B8N2 356 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 SPATA45Q537H7 98 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 FAM74A4Q5TZK3 123 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 LGALS9CQ6DKI2 356 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 ZNF705AQ6ZN79 300 aaPredicted RBP3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 ATOH7Q8N100 152 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 C1orf158Q8N1D5 194 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 TMEM158Q8WZ71 300 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 TMEM208Q9BTX3 173 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 ST20Q9HBF5 79 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 PKD1L1Q8TDX9 2849 aa3.33□□□□□ -1.88
PPP4R3A-204ENST00000554574 H7C1H1 209 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms