RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 H7C2G1 150 aa11.46□□□□□ -0.57
ARHGEF40-203ENST00000554514 ZNF22P17026 224 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF40-203ENST00000554514 UBE2D1P51668 147 aa11.46□□□□□ -0.57
ARHGEF40-203ENST00000554514 IGHV3-30P01768 117 aa11.46□□□□□ -0.57
ARHGEF40-203ENST00000554514 IGHV3-30-5P0DP03 117 aa11.46□□□□□ -0.57
ARHGEF40-203ENST00000554514 MAP6D1Q9H9H5 199 aa11.46□□□□□ -0.57
ARHGEF40-203ENST00000554514 PEMTQ9UBM1 199 aa11.46□□□□□ -0.57
ARHGEF40-203ENST00000554514 TMEM223A0PJW6 202 aa11.46□□□□□ -0.58
ARHGEF40-203ENST00000554514 INSL3P51460 131 aa11.46□□□□□ -0.58
ARHGEF40-203ENST00000554514 NDUFA11Q86Y39 141 aa11.46□□□□□ -0.58
ARHGEF40-203ENST00000554514 AKAP9Q99996 3911 aa11.46□□□□□ -0.58
ARHGEF40-203ENST00000554514 RHODO00212 210 aa11.45□□□□□ -0.58
ARHGEF40-203ENST00000554514 SLC25A29Q8N8R3 303 aa11.45□□□□□ -0.58
ARHGEF40-203ENST00000554514 AMELXQ99217 191 aa11.45□□□□□ -0.58
ARHGEF40-203ENST00000554514 XCL2Q9UBD3 114 aa11.45□□□□□ -0.58
ARHGEF40-203ENST00000554514 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
ARHGEF40-203ENST00000554514 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
ARHGEF40-203ENST00000554514 CKS1BP61024 79 aa11.45□□□□□ -0.58
ARHGEF40-203ENST00000554514 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
ARHGEF40-203ENST00000554514 RNF152Q8N8N0 203 aa11.45□□□□□ -0.58
ARHGEF40-203ENST00000554514 M0R2P5 195 aa11.44□□□□□ -0.58
ARHGEF40-203ENST00000554514 CFC1BP0CG36 223 aa11.44□□□□□ -0.58
ARHGEF40-203ENST00000554514 CFC1P0CG37 223 aa11.44□□□□□ -0.58
ARHGEF40-203ENST00000554514 AZU1P20160 251 aa11.44□□□□□ -0.58
ARHGEF40-203ENST00000554514 TSSC4Q9Y5U2 329 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF40-203ENST00000554514 APCP25054 2843 aa11.44□□□□□ -0.58
ARHGEF40-203ENST00000554514 ITPR3Q14573 2671 aa11.44□□□□□ -0.58
ARHGEF40-203ENST00000554514 ZNF415Q09FC8 603 aa11.44□□□□□ -0.58
ARHGEF40-203ENST00000554514 ZNF843Q8N446 348 aa11.44□□□□□ -0.58
ARHGEF40-203ENST00000554514 RAX2Q96IS3 184 aa11.44□□□□□ -0.58
ARHGEF40-203ENST00000554514 TRAV8-3A0A0A6YYJ7 113 aa11.43□□□□□ -0.58
ARHGEF40-203ENST00000554514 LEPROTO15243 131 aa11.43□□□□□ -0.58
ARHGEF40-203ENST00000554514 HERV-K104P63124 156 aa11.43□□□□□ -0.58
ARHGEF40-203ENST00000554514 PRO0461Q9UI25 63 aa11.43□□□□□ -0.58
ARHGEF40-203ENST00000554514 SCGB1C2P0DMR2 95 aa11.42□□□□□ -0.58
ARHGEF40-203ENST00000554514 C4orf3Q8WVX3 66 aa11.42□□□□□ -0.58
ARHGEF40-203ENST00000554514 CFAP126Q5VTH2 177 aa11.42□□□□□ -0.58
ARHGEF40-203ENST00000554514 A4D1N5 150 aa11.42□□□□□ -0.58
ARHGEF40-203ENST00000554514 A8MWV9 139 aa11.42□□□□□ -0.58
ARHGEF40-203ENST00000554514 A8MZ25 164 aa11.42□□□□□ -0.58
ARHGEF40-203ENST00000554514 PTH2Q96A98 100 aa11.42□□□□□ -0.58
ARHGEF40-203ENST00000554514 JMJD1CQ15652 2540 aa11.41□□□□□ -0.58
ARHGEF40-203ENST00000554514 DEFB114Q30KQ6 69 aa11.41□□□□□ -0.58
ARHGEF40-203ENST00000554514 NIPBLQ6KC79 2804 aaeCLIP11.41□□□□□ -0.58
ARHGEF40-203ENST00000554514 FLNAP21333 2647 aaKnown RBP11.41□□□□□ -0.58
ARHGEF40-203ENST00000554514 HIST2H2BCQ6DN03 193 aa11.4□□□□□ -0.58
ARHGEF40-203ENST00000554514 MUSTN1Q8IVN3 82 aa11.4□□□□□ -0.58
ARHGEF40-203ENST00000554514 TIMM21Q9BVV7 248 aa11.4□□□□□ -0.58
ARHGEF40-203ENST00000554514 C2CD3Q4AC94 2353 aa11.4□□□□□ -0.58
ARHGEF40-203ENST00000554514 NPC2P61916 151 aa11.4□□□□□ -0.58
ARHGEF40-203ENST00000554514 C10orf126Q8N4M7 172 aa11.4□□□□□ -0.58
ARHGEF40-203ENST00000554514 FAM104AQ969W3 186 aa11.4□□□□□ -0.58
ARHGEF40-203ENST00000554514 TCL1BO95988 128 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 IGHV3-30-3P0DP02 117 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 CITED1Q99966 193 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 J3QR89 54 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 INSP01308 110 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 SMCPP49901 116 aaPredicted RBP11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 Q6ZSV7 163 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 LINC00467Q9BRT7 94 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 SS18L2Q9UHA2 77 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 PRO1854Q9UHT4 67 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 ACANP16112 2415 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 PRSS2P07478 247 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 SPINK8P0C7L1 97 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 Q8N2B8 174 aa11.39□□□□□ -0.59
ARHGEF40-203ENST00000554514 IGHV3-53P01767 116 aa11.38□□□□□ -0.59
ARHGEF40-203ENST00000554514 Q6ZUT4 128 aa11.38□□□□□ -0.59
ARHGEF40-203ENST00000554514 WFDC11Q8NEX6 87 aa11.38□□□□□ -0.59
ARHGEF40-203ENST00000554514 Q1RN00 199 aa11.38□□□□□ -0.59
ARHGEF40-203ENST00000554514 C11orf72Q8NBR9 251 aa11.38□□□□□ -0.59
ARHGEF40-203ENST00000554514 CHCHD7Q9BUK0 85 aa11.38□□□□□ -0.59
ARHGEF40-203ENST00000554514 UBE2D3P61077 147 aa11.37□□□□□ -0.59
ARHGEF40-203ENST00000554514 UBE2D2P62837 147 aa11.37□□□□□ -0.59
ARHGEF40-203ENST00000554514 MTORP42345 2549 aa11.37□□□□□ -0.59
ARHGEF40-203ENST00000554514 GAGE12HA6NDE8 117 aa11.37□□□□□ -0.59
ARHGEF40-203ENST00000554514 EIF4EBP3O60516 100 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF40-203ENST00000554514 STHQ8IWL8 128 aa11.37□□□□□ -0.59
ARHGEF40-203ENST00000554514 TRGV1A0A0A0MS02 117 aa11.36□□□□□ -0.59
ARHGEF40-203ENST00000554514 A0A0J9YXY3 114 aa11.36□□□□□ -0.59
ARHGEF40-203ENST00000554514 ODF3L2Q3SX64 289 aa11.36□□□□□ -0.59
ARHGEF40-203ENST00000554514 DNAJC9-AS1A6NH13 148 aa11.36□□□□□ -0.59
ARHGEF40-203ENST00000554514 SIGMAR1Q99720 223 aa11.36□□□□□ -0.59
ARHGEF40-203ENST00000554514 UBE2D4Q9Y2X8 147 aa11.36□□□□□ -0.59
ARHGEF40-203ENST00000554514 A8MTW9 85 aa11.35□□□□□ -0.59
ARHGEF40-203ENST00000554514 KRTAP1-3Q8IUG1 177 aa11.35□□□□□ -0.59
ARHGEF40-203ENST00000554514 PYGO1Q9Y3Y4 419 aa11.35□□□□□ -0.59
ARHGEF40-203ENST00000554514 SCGB1A1P11684 91 aa11.35□□□□□ -0.59
ARHGEF40-203ENST00000554514 MRPS36P82909 103 aaKnown RBP11.34□□□□□ -0.59
ARHGEF40-203ENST00000554514 LYRM7Q5U5X0 104 aa11.34□□□□□ -0.59
ARHGEF40-203ENST00000554514 DGAT2L7PQ6IED9 249 aa11.34□□□□□ -0.59
ARHGEF40-203ENST00000554514 GEMIN7Q9H840 131 aaKnown RBP11.34□□□□□ -0.59
ARHGEF40-203ENST00000554514 NDUFA12Q9UI09 145 aa11.34□□□□□ -0.59
ARHGEF40-203ENST00000554514 C1QTNF4Q9BXJ3 329 aa11.33□□□□□ -0.6
ARHGEF40-203ENST00000554514 ERG28Q9UKR5 140 aa11.33□□□□□ -0.6
ARHGEF40-203ENST00000554514 FOXI1Q12951 378 aa11.32□□□□□ -0.6
ARHGEF40-203ENST00000554514 TMEM263Q8WUH6 116 aaKnown RBP11.32□□□□□ -0.6
ARHGEF40-203ENST00000554514 EDA2RQ9HAV5 297 aa11.32□□□□□ -0.6
ARHGEF40-203ENST00000554514 ESM1Q9NQ30 184 aa11.32□□□□□ -0.6
ARHGEF40-203ENST00000554514 CCL24O00175 119 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms