RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 Q1RN00 199 aa1.89□□□□□ -2.11
PRPF39-207ENST00000554439 ZNF876PQ49A33 203 aa1.89□□□□□ -2.11
PRPF39-207ENST00000554439 TTC32Q5I0X7 151 aa1.89□□□□□ -2.11
PRPF39-207ENST00000554439 MRPL53Q96EL3 112 aaKnown RBP1.89□□□□□ -2.11
PRPF39-207ENST00000554439 ODF3Q96PU9 254 aa1.89□□□□□ -2.11
PRPF39-207ENST00000554439 CSPG4Q6UVK1 2322 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 CREBBPQ92793 2442 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 SPG11Q96JI7 2443 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 TRAV8-3A0A0A6YYJ7 113 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 TRBV7-1A0A0A6YYK4 115 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 A0A0J9YXV3 536 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 A0A1W2PPR1 153 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 P0DMU3 169 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 FAM231AP0DMU4 169 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 FAM231CP0DMU5 169 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 LYRM7Q5U5X0 104 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 CEMP1Q6PRD7 247 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-207ENST00000554439 FAM159AQ6UWV7 190 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 C9orf139Q6ZV77 190 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 C5orf56Q8N8D9 126 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 CLEC2BQ92478 149 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 FAM19A4Q96LR4 140 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 SIRPDQ9H106 197 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 MDFICQ9P1T7 246 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 HIVEP3Q5T1R4 2406 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 IGHV3-73A0A0B4J1V6 119 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 IGHV1-69DA0A0B4J2H0 117 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 TMEM223A0PJW6 202 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 TMEM262E9PQX1 116 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 CCL21O00585 134 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 PRM2P04554 102 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 PRSS2P07478 247 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 IFITM1P13164 125 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 ZNF22P17026 224 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-207ENST00000554439 UBE2E1P51965 193 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 ZNF56Q15929 161 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 LINC01620Q4KN68 170 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 ADAMTSL4-AS1Q5T5F5 129 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 MINOS1Q5TGZ0 78 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 BRD3OSQ6XYD6 125 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 STHQ8IWL8 128 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 SMIM20Q8N5G0 67 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 DAND5Q8N907 189 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 C15orf53Q8NAA6 179 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 DUX3Q96PT4 197 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 UBTD1Q9HAC8 227 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 Q9UF83 564 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 KLK9Q9UKQ9 250 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 MINOS1-NBL1R4GNA1 71 aa1.88□□□□□ -2.11
PRPF39-207ENST00000554439 IGHV4OR15-8A0A075B7B6 117 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 A0A087WW49 117 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 TRAV8-4A0A0B4J246 113 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 TRAV41A0A0B4J266 112 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 A0A0J9YXY3 114 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 TRBV27A0A0K0K1C4 114 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 INAFM1C9JVW0 142 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 H7C423 109 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 OVOL1O14753 267 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 LEPROTO15243 131 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 GAGE7O76087 117 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 NXPH4O95158 308 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 GAGE12FP0CL80 117 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 GAGE12GP0CL81 117 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 GAGE12IP0CL82 117 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 IGHV4-30-4P0DP06 118 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 KRTAP10-11P60412 298 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 HERV-K104P63124 156 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 GAGE4Q13068 117 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 ATXN8Q156A1 80 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 LY6EQ16553 131 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 C11orf71Q6IPW1 123 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 POM121L12Q8N7R1 296 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 TMEM141Q96I45 108 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 TIMM17AQ99595 171 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 LITAFQ99732 161 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 CHCHD5Q9BSY4 110 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 LENEPQ9Y5L5 61 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 ZANQ9Y493 2812 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 NOTCH3Q9UM47 2321 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 IGLV4-3A0A075B6K6 122 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 A0A0B4J2C4 111 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 TRBV7-9A0A0J9YWB2 115 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 A0A0U1RRA0 63 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 OOSP1A8MZH6 123 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 H3BMM0 161 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 M0QY20 66 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 M0R2P5 195 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 PPP1R17O96001 155 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 IGHV3-30-3P0DP02 117 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 HTN1P15515 57 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 RPL32P62910 135 aaKnown RBP1.87□□□□□ -2.11
PRPF39-207ENST00000554439 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 C2orf82Q6UX34 121 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 Q8N1X5 172 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 FAM104AQ969W3 186 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 UBE2WQ96B02 151 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 RHPN1-AS1Q9BWJ2 59 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 C2CD3Q4AC94 2353 aa1.87□□□□□ -2.11
PRPF39-207ENST00000554439 MUC6Q6W4X9 2439 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms