RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PIEZO1Q92508 2521 aa6.98□□□□□ -1.29
SIX4-202ENST00000554079 ICE1Q9Y2F5 2266 aa6.98□□□□□ -1.29
SIX4-202ENST00000554079 PATE3B3GLJ2 98 aa6.98□□□□□ -1.29
SIX4-202ENST00000554079 GNRH2O43555 120 aa6.98□□□□□ -1.29
SIX4-202ENST00000554079 C6orf226Q5I0X4 101 aa6.98□□□□□ -1.29
SIX4-202ENST00000554079 SIRPDQ9H106 197 aa6.98□□□□□ -1.29
SIX4-202ENST00000554079 MGAQ8IWI9 3026 aa6.97□□□□□ -1.29
SIX4-202ENST00000554079 PTPRZ1P23471 2315 aaPredicted RBP6.97□□□□□ -1.29
SIX4-202ENST00000554079 OTOGLQ3ZCN5 2332 aa6.97□□□□□ -1.29
SIX4-202ENST00000554079 PLCE1Q9P212 2302 aa6.97□□□□□ -1.29
SIX4-202ENST00000554079 TRAV23DV6A0A075B6W5 121 aa6.97□□□□□ -1.29
SIX4-202ENST00000554079 IGHV3-35A0A0C4DH35 117 aa6.97□□□□□ -1.29
SIX4-202ENST00000554079 M0R1B8 84 aa6.97□□□□□ -1.29
SIX4-202ENST00000554079 NDPQ00604 133 aa6.97□□□□□ -1.29
SIX4-202ENST00000554079 SOSTDC1Q6X4U4 206 aa6.97□□□□□ -1.29
SIX4-202ENST00000554079 AHCTF1Q8WYP5 2266 aa6.97□□□□□ -1.29
SIX4-202ENST00000554079 RIF1Q5UIP0 2472 aaKnown RBP6.97□□□□□ -1.29
SIX4-202ENST00000554079 IGHV3-66A0A0C4DH42 116 aa6.96□□□□□ -1.29
SIX4-202ENST00000554079 NDUFA1O15239 70 aa6.96□□□□□ -1.29
SIX4-202ENST00000554079 NDUFB3O43676 98 aa6.96□□□□□ -1.29
SIX4-202ENST00000554079 PRB3Q04118 309 aaPredicted RBP6.96□□□□□ -1.29
SIX4-202ENST00000554079 KLKP1Q107X0 134 aa6.96□□□□□ -1.29
SIX4-202ENST00000554079 C9orf106Q8NAJ2 232 aa6.96□□□□□ -1.29
SIX4-202ENST00000554079 EP300Q09472 2414 aaPredicted RBP6.96□□□□□ -1.3
SIX4-202ENST00000554079 ZNF292O60281 2723 aa6.96□□□□□ -1.3
SIX4-202ENST00000554079 TRBV7-6A0A0J9YX20 115 aa6.96□□□□□ -1.3
SIX4-202ENST00000554079 ATP5EP2Q5VTU8 51 aa6.96□□□□□ -1.3
SIX4-202ENST00000554079 ITLN2Q8WWU7 325 aaPredicted RBP6.96□□□□□ -1.3
SIX4-202ENST00000554079 A0A087WWL8 130 aa6.95□□□□□ -1.3
SIX4-202ENST00000554079 CCKP06307 115 aa6.95□□□□□ -1.3
SIX4-202ENST00000554079 RPL11P62913 178 aaKnown RBP6.95□□□□□ -1.3
SIX4-202ENST00000554079 SS18Q15532 418 aa6.95□□□□□ -1.3
SIX4-202ENST00000554079 APRG1Q8IVJ8 170 aa6.95□□□□□ -1.3
SIX4-202ENST00000554079 COPS9Q8WXC6 57 aa6.95□□□□□ -1.3
SIX4-202ENST00000554079 GPR179Q6PRD1 2367 aa6.95□□□□□ -1.3
SIX4-202ENST00000554079 DMXL1Q9Y485 3027 aa6.95□□□□□ -1.3
SIX4-202ENST00000554079 TRAV7A0A075B6U4 112 aa6.94□□□□□ -1.3
SIX4-202ENST00000554079 KALRNO60229 2985 aa6.94□□□□□ -1.3
SIX4-202ENST00000554079 F5H697 171 aa6.94□□□□□ -1.3
SIX4-202ENST00000554079 M0QY20 66 aa6.94□□□□□ -1.3
SIX4-202ENST00000554079 BCE1O60756 84 aa6.94□□□□□ -1.3
SIX4-202ENST00000554079 CD28P10747 220 aa6.94□□□□□ -1.3
SIX4-202ENST00000554079 HOXD3P31249 432 aaPredicted RBP6.94□□□□□ -1.3
SIX4-202ENST00000554079 LY6G5BQ8NDX9 201 aa6.94□□□□□ -1.3
SIX4-202ENST00000554079 WFDC9Q8NEX5 89 aa6.94□□□□□ -1.3
SIX4-202ENST00000554079 NPBQ8NG41 125 aa6.94□□□□□ -1.3
SIX4-202ENST00000554079 DCHS1Q96JQ0 3298 aa6.94□□□□□ -1.3
SIX4-202ENST00000554079 DSPP15924 2871 aaKnown RBP6.94□□□□□ -1.3
SIX4-202ENST00000554079 IGHV3OR16-13A0A075B7E8 117 aa6.93□□□□□ -1.3
SIX4-202ENST00000554079 IGHV3-74A0A0B4J1X5 117 aa6.93□□□□□ -1.3
SIX4-202ENST00000554079 A0A1W2PRX2 142 aa6.93□□□□□ -1.3
SIX4-202ENST00000554079 CFHR3Q02985 330 aa6.93□□□□□ -1.3
SIX4-202ENST00000554079 GVINP1Q7Z2Y8 2422 aa6.93□□□□□ -1.3
SIX4-202ENST00000554079 CELSR3Q9NYQ7 3312 aa6.93□□□□□ -1.3
SIX4-202ENST00000554079 CCL21O00585 134 aa6.93□□□□□ -1.3
SIX4-202ENST00000554079 ZNF625Q96I27 306 aaPredicted RBP6.93□□□□□ -1.3
SIX4-202ENST00000554079 URB1O60287 2271 aaKnown RBP6.92□□□□□ -1.3
SIX4-202ENST00000554079 F8WEM9 126 aa6.92□□□□□ -1.3
SIX4-202ENST00000554079 FAM110DQ8TAY7 271 aaPredicted RBP6.92□□□□□ -1.3
SIX4-202ENST00000554079 OVOL2Q9BRP0 275 aa6.92□□□□□ -1.3
SIX4-202ENST00000554079 U3KQE9 123 aa6.92□□□□□ -1.3
SIX4-202ENST00000554079 A0A087WYN8 130 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 IGHV3-49A0A0A0MS15 119 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 TRBV10-3A0A0K0K1G6 114 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 A0A0U1RRA0 63 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 IGFL2Q6UWQ7 119 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 C1orf158Q8N1D5 194 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 RMI2Q96E14 147 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 SOCS3O14543 225 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 COX7A1P24310 79 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 ATP5EP56381 51 aaPredicted RBP6.91□□□□□ -1.3
SIX4-202ENST00000554079 RBM3P98179 157 aaKnown RBP6.91□□□□□ -1.3
SIX4-202ENST00000554079 PMAIP1Q13794 54 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 RNASE13Q5GAN3 156 aaKnown RBP6.91□□□□□ -1.3
SIX4-202ENST00000554079 HIST2H2BCQ6DN03 193 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 HIST2H2BDQ6DRA6 164 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 ENHOQ6UWT2 76 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 DEFB124Q8NES8 71 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 KAAG1Q9UBP8 84 aa6.91□□□□□ -1.3
SIX4-202ENST00000554079 NCR3O14931 201 aa6.9□□□□□ -1.3
SIX4-202ENST00000554079 C15orf32Q32M92 178 aa6.9□□□□□ -1.3
SIX4-202ENST00000554079 FAM229BQ4G0N7 80 aa6.9□□□□□ -1.3
SIX4-202ENST00000554079 DEFB1P60022 68 aa6.89□□□□□ -1.31
SIX4-202ENST00000554079 PRR15Q8IV56 129 aa6.89□□□□□ -1.31
SIX4-202ENST00000554079 BPESC1Q9GZL8 116 aa6.89□□□□□ -1.31
SIX4-202ENST00000554079 SNURFQ9Y675 71 aa6.89□□□□□ -1.31
SIX4-202ENST00000554079 IGLV5-45A0A087WSX0 123 aa6.89□□□□□ -1.31
SIX4-202ENST00000554079 FAM74A4Q5TZK3 123 aa6.89□□□□□ -1.31
SIX4-202ENST00000554079 Q9H8V8 135 aa6.88□□□□□ -1.31
SIX4-202ENST00000554079 TRAV13-2A0A0B4J235 113 aa6.88□□□□□ -1.31
SIX4-202ENST00000554079 IGLV5-39A0A0G2JS06 123 aa6.88□□□□□ -1.31
SIX4-202ENST00000554079 IBA57-AS1B1ANH7 110 aa6.88□□□□□ -1.31
SIX4-202ENST00000554079 PF4P02776 101 aa6.88□□□□□ -1.31
SIX4-202ENST00000554079 BLCAPP62952 87 aa6.88□□□□□ -1.31
SIX4-202ENST00000554079 Q6ZRU5 148 aa6.88□□□□□ -1.31
SIX4-202ENST00000554079 CCDC140Q96MF4 163 aa6.88□□□□□ -1.31
SIX4-202ENST00000554079 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
SIX4-202ENST00000554079 PTPRQQ9UMZ3 2332 aa6.87□□□□□ -1.31
SIX4-202ENST00000554079 SNRPD3P62318 126 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms