RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 K7EP13 123 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 CDK2AP2O75956 126 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 ATP5LO75964 103 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 IGKV2D-40P01614 121 aaPredicted RBP6.19□□□□□ -1.42
TDP1-208ENST00000553989 VAMP3Q15836 100 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 TMEM97Q5BJF2 176 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 AMN1Q8IY45 258 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 ZNRF2Q8NHG8 242 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 C16orf74Q96GX8 76 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 AGPAT4-IT1Q9H0P7 198 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 DNAH11Q96DT5 4516 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 ABCA13Q86UQ4 5058 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 TRAV8-2A0A0B4J237 113 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 CBY3A6NI87 242 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 A8MTW9 85 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 K7EMI3 77 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 PPP1R17O96001 155 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 PRB4P10163 310 aaPredicted RBP6.18□□□□□ -1.42
TDP1-208ENST00000553989 AZU1P20160 251 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 MPV17L2Q567V2 206 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 BOD1L2Q8IYS8 172 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 Q8N8P6 123 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 LINC00588Q9Y4M8 146 aa6.18□□□□□ -1.42
TDP1-208ENST00000553989 TIMM8BQ9Y5J9 83 aaPredicted RBP6.18□□□□□ -1.42
TDP1-208ENST00000553989 DNAH17Q9UFH2 4485 aa6.17□□□□□ -1.42
TDP1-208ENST00000553989 LINC01549A6NIU2 74 aa6.17□□□□□ -1.42
TDP1-208ENST00000553989 TNFRSF6BO95407 300 aa6.17□□□□□ -1.42
TDP1-208ENST00000553989 ZNF80P51504 273 aaPredicted RBP6.17□□□□□ -1.42
TDP1-208ENST00000553989 TTC32Q5I0X7 151 aa6.17□□□□□ -1.42
TDP1-208ENST00000553989 OR4C5Q8NGB2 326 aa6.17□□□□□ -1.42
TDP1-208ENST00000553989 OR8A1Q8NGG7 326 aa6.17□□□□□ -1.42
TDP1-208ENST00000553989 OR10J6PQ8NGY7 276 aa6.17□□□□□ -1.42
TDP1-208ENST00000553989 MRAP2Q96G30 205 aa6.17□□□□□ -1.42
TDP1-208ENST00000553989 RNF185Q96GF1 192 aa6.17□□□□□ -1.42
TDP1-208ENST00000553989 AP1S3Q96PC3 154 aa6.17□□□□□ -1.42
TDP1-208ENST00000553989 NOP10Q9NPE3 64 aaKnown RBP6.17□□□□□ -1.42
TDP1-208ENST00000553989 DYNC1H1Q14204 4646 aaKnown RBP6.16□□□□□ -1.42
TDP1-208ENST00000553989 A0A0J9YY99 117 aa6.16□□□□□ -1.42
TDP1-208ENST00000553989 PLAC8L1A1L4L8 177 aa6.16□□□□□ -1.42
TDP1-208ENST00000553989 H3BRM9 83 aa6.16□□□□□ -1.42
TDP1-208ENST00000553989 TAX1BP3O14907 124 aa6.16□□□□□ -1.42
TDP1-208ENST00000553989 CCL25O15444 150 aa6.16□□□□□ -1.42
TDP1-208ENST00000553989 LEPP41159 167 aa6.16□□□□□ -1.42
TDP1-208ENST00000553989 CDKN1BP46527 198 aa6.16□□□□□ -1.42
TDP1-208ENST00000553989 HSD52Q0P140 79 aa6.16□□□□□ -1.42
TDP1-208ENST00000553989 TMEM263Q8WUH6 116 aaKnown RBP6.16□□□□□ -1.42
TDP1-208ENST00000553989 Q9H8V8 135 aa6.16□□□□□ -1.42
TDP1-208ENST00000553989 HIGD1BQ9P298 99 aa6.16□□□□□ -1.42
TDP1-208ENST00000553989 PLA2G2DQ9UNK4 145 aa6.16□□□□□ -1.42
TDP1-208ENST00000553989 TRAV26-1A0A087WT03 109 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 A0A096LNJ9 63 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 TRAV21A0A0B4J279 112 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 PRAC2D3DTV9 90 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 H0Y8G0 127 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 J3KRW8 73 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 SNAI2O43623 268 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 NPYP01303 97 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 PRSS1P07477 247 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 EVI2AP22794 236 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 ERCC8Q13216 396 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 LAGE3Q14657 143 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 GTF2H5Q6ZYL4 71 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 C20orf78Q9BR46 151 aa6.15□□□□□ -1.42
TDP1-208ENST00000553989 PKD1P98161 4303 aa6.15□□□□□ -1.43
TDP1-208ENST00000553989 IGKV3D-20A0A0C4DH25 116 aa6.14□□□□□ -1.43
TDP1-208ENST00000553989 GAGE12BA1L429 117 aa6.14□□□□□ -1.43
TDP1-208ENST00000553989 GAGE7O76087 117 aa6.14□□□□□ -1.43
TDP1-208ENST00000553989 GAGE12FP0CL80 117 aa6.14□□□□□ -1.43
TDP1-208ENST00000553989 GAGE12GP0CL81 117 aa6.14□□□□□ -1.43
TDP1-208ENST00000553989 GAGE12IP0CL82 117 aa6.14□□□□□ -1.43
TDP1-208ENST00000553989 Q8N1X5 172 aa6.14□□□□□ -1.43
TDP1-208ENST00000553989 Q8TAT8 98 aa6.14□□□□□ -1.43
TDP1-208ENST00000553989 RNASE8Q8TDE3 154 aaKnown RBP6.14□□□□□ -1.43
TDP1-208ENST00000553989 MUC21A0A0G2JKD1 596 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 MUC21A0A140T8X8 626 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 DPM2O94777 84 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 NCR2O95944 276 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 IGKCP01834 107 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 SMIM17P0DL12 118 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 FGF6P10767 208 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 TAL2Q16559 108 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 ORMDL2Q53FV1 153 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 MUC21Q5SSG8 566 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 SPANXN1Q5VSR9 72 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 C2orf91Q6ZV80 131 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 MSRB1Q9NZV6 116 aa6.13□□□□□ -1.43
TDP1-208ENST00000553989 TRAV12-1A0A0B4J245 112 aa6.12□□□□□ -1.43
TDP1-208ENST00000553989 C7orf71A4D174 169 aa6.12□□□□□ -1.43
TDP1-208ENST00000553989 GAGE10A6NGK3 116 aa6.12□□□□□ -1.43
TDP1-208ENST00000553989 SMKR1H3BMG3 65 aa6.12□□□□□ -1.43
TDP1-208ENST00000553989 M0R381 172 aa6.12□□□□□ -1.43
TDP1-208ENST00000553989 SMIM13P0DJ93 91 aa6.12□□□□□ -1.43
TDP1-208ENST00000553989 AMMECR1LQ6DCA0 310 aa6.12□□□□□ -1.43
TDP1-208ENST00000553989 KRTAP1-5Q9BYS1 174 aa6.12□□□□□ -1.43
TDP1-208ENST00000553989 TRGV2A0A075B6R0 118 aa6.11□□□□□ -1.43
TDP1-208ENST00000553989 A0A087WX48 190 aa6.11□□□□□ -1.43
TDP1-208ENST00000553989 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.11□□□□□ -1.43
TDP1-208ENST00000553989 S100A4P26447 101 aaKnown RBP6.11□□□□□ -1.43
TDP1-208ENST00000553989 PLNP26678 52 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms