RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 RASL11AQ6T310 242 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 NEXN-AS1Q8NBZ9 246 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 ISOC2Q96AB3 205 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 HIGD1CA8MV81 97 aa5.66□□□□□ -1.5
PSEN1-209ENST00000553855 PPP1R2P9O14990 202 aa5.66□□□□□ -1.5
PSEN1-209ENST00000553855 LINC00694P0DN24 101 aa5.66□□□□□ -1.5
PSEN1-209ENST00000553855 FOXA3P55318 350 aaPredicted RBP5.66□□□□□ -1.5
PSEN1-209ENST00000553855 FRZBQ92765 325 aa5.66□□□□□ -1.5
PSEN1-209ENST00000553855 RMI2Q96E14 147 aa5.66□□□□□ -1.5
PSEN1-209ENST00000553855 CHCHD5Q9BSY4 110 aa5.66□□□□□ -1.5
PSEN1-209ENST00000553855 CHCHD7Q9BUK0 85 aa5.66□□□□□ -1.5
PSEN1-209ENST00000553855 CNFNQ9BYD5 112 aa5.66□□□□□ -1.5
PSEN1-209ENST00000553855 NIT2Q9NQR4 276 aa5.66□□□□□ -1.5
PSEN1-209ENST00000553855 NAT8BQ9UHF3 227 aa5.66□□□□□ -1.5
PSEN1-209ENST00000553855 KIF25-AS1Q9Y6Z4 181 aa5.66□□□□□ -1.5
PSEN1-209ENST00000553855 KMT2AQ03164 3969 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 TRBV25-1A0A075B6N4 114 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 TRBV6-8A0A0A6YYG3 113 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 TRAV8-3A0A0A6YYJ7 113 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 IBA57-AS1B1ANH7 110 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 M0QY20 66 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 S100A8P05109 93 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 PNRC1Q12796 327 aaPredicted RBP5.65□□□□□ -1.5
PSEN1-209ENST00000553855 LAGE3Q14657 143 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 CLLU1Q5K131 121 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 GTSF1Q8WW33 167 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 KRTAP1-5Q9BYS1 174 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 Q9HAA7 133 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 COX11Q9Y6N1 276 aa5.65□□□□□ -1.5
PSEN1-209ENST00000553855 DNAH6Q9C0G6 4158 aa5.64□□□□□ -1.51
PSEN1-209ENST00000553855 IGHV1-24A0A0C4DH33 117 aa5.64□□□□□ -1.51
PSEN1-209ENST00000553855 A0A1B0GW15 77 aa5.64□□□□□ -1.51
PSEN1-209ENST00000553855 C9JQL5 133 aa5.64□□□□□ -1.51
PSEN1-209ENST00000553855 UBE2L6O14933 153 aa5.64□□□□□ -1.51
PSEN1-209ENST00000553855 CRPP02741 224 aa5.64□□□□□ -1.51
PSEN1-209ENST00000553855 COTL1Q14019 142 aa5.64□□□□□ -1.51
PSEN1-209ENST00000553855 NIT1Q86X76 327 aa5.64□□□□□ -1.51
PSEN1-209ENST00000553855 Q9UF83 564 aa5.64□□□□□ -1.51
PSEN1-209ENST00000553855 V9GYV3 84 aa5.64□□□□□ -1.51
PSEN1-209ENST00000553855 DNAH10Q8IVF4 4471 aa5.64□□□□□ -1.51
PSEN1-209ENST00000553855 PPP1R17O96001 155 aa5.63□□□□□ -1.51
PSEN1-209ENST00000553855 MT-ND4LP03901 98 aa5.63□□□□□ -1.51
PSEN1-209ENST00000553855 Q0VG73 95 aa5.63□□□□□ -1.51
PSEN1-209ENST00000553855 UQCC3Q6UW78 93 aa5.63□□□□□ -1.51
PSEN1-209ENST00000553855 TMEM191AQ9H0A3 160 aa5.63□□□□□ -1.51
PSEN1-209ENST00000553855 C16orf90A8MZG2 172 aa5.62□□□□□ -1.51
PSEN1-209ENST00000553855 F8W036 122 aa5.62□□□□□ -1.51
PSEN1-209ENST00000553855 ANGP03950 147 aaKnown RBP5.62□□□□□ -1.51
PSEN1-209ENST00000553855 PMCHP20382 165 aa5.62□□□□□ -1.51
PSEN1-209ENST00000553855 AMTP48728 403 aa5.62□□□□□ -1.51
PSEN1-209ENST00000553855 GATD1Q8NB37 220 aa5.62□□□□□ -1.51
PSEN1-209ENST00000553855 NUP35Q8NFH5 326 aa5.62□□□□□ -1.51
PSEN1-209ENST00000553855 UBE2WQ96B02 151 aa5.62□□□□□ -1.51
PSEN1-209ENST00000553855 MRAP2Q96G30 205 aa5.62□□□□□ -1.51
PSEN1-209ENST00000553855 TMEM243Q9BU79 118 aa5.62□□□□□ -1.51
PSEN1-209ENST00000553855 KLK12Q9UKR0 248 aa5.62□□□□□ -1.51
PSEN1-209ENST00000553855 IGKV2D-24A0A075B6R9 120 aa5.61□□□□□ -1.51
PSEN1-209ENST00000553855 TRAV26-2A0A0B4J265 109 aa5.61□□□□□ -1.51
PSEN1-209ENST00000553855 A0A1B0GVY2 172 aa5.61□□□□□ -1.51
PSEN1-209ENST00000553855 SMIM27A0A1W2PRY6 76 aa5.61□□□□□ -1.51
PSEN1-209ENST00000553855 GAGE6Q13070 117 aa5.61□□□□□ -1.51
PSEN1-209ENST00000553855 IQCJQ1A5X6 159 aa5.61□□□□□ -1.51
PSEN1-209ENST00000553855 SPATA12Q7Z6I5 190 aa5.61□□□□□ -1.51
PSEN1-209ENST00000553855 ST20Q9HBF5 79 aa5.61□□□□□ -1.51
PSEN1-209ENST00000553855 SDHAF1A6NFY7 115 aa5.6□□□□□ -1.51
PSEN1-209ENST00000553855 NCR2O95944 276 aa5.6□□□□□ -1.51
PSEN1-209ENST00000553855 APCSP02743 223 aa5.6□□□□□ -1.51
PSEN1-209ENST00000553855 HBBP68871 147 aa5.6□□□□□ -1.51
PSEN1-209ENST00000553855 AMMECR1LQ6DCA0 310 aa5.6□□□□□ -1.51
PSEN1-209ENST00000553855 Q6ZRN7 208 aaPredicted RBP5.6□□□□□ -1.51
PSEN1-209ENST00000553855 DNAH2Q9P225 4427 aa5.6□□□□□ -1.51
PSEN1-209ENST00000553855 A0A087WTM6 91 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 LINC00862A6NCI5 91 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 I3L3M4 83 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 RAB4AP20338 218 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 FCER1GP30273 86 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 CKS2P33552 79 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 SMAGPQ0VAQ4 97 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 MPV17L2Q567V2 206 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 MRPL54Q6P161 138 aaKnown RBP5.59□□□□□ -1.51
PSEN1-209ENST00000553855 ATRAIDQ6UW56 229 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 ATP5L2Q7Z4Y8 100 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 AMN1Q8IY45 258 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 SLC7A5P1Q8MH63 180 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 RPL39LQ96EH5 51 aaKnown RBP5.59□□□□□ -1.51
PSEN1-209ENST00000553855 TMEM101Q96IK0 257 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 BTF3L4Q96K17 158 aa5.59□□□□□ -1.51
PSEN1-209ENST00000553855 TRBV6-5A0A0K0K1A5 114 aa5.58□□□□□ -1.52
PSEN1-209ENST00000553855 TMEM218A2RU14 115 aa5.58□□□□□ -1.52
PSEN1-209ENST00000553855 RBX1P62877 108 aa5.58□□□□□ -1.52
PSEN1-209ENST00000553855 MIAQ16674 131 aa5.58□□□□□ -1.52
PSEN1-209ENST00000553855 FAM104BQ5XKR9 115 aa5.58□□□□□ -1.52
PSEN1-209ENST00000553855 RNASEKQ6P5S7 137 aaKnown RBP5.58□□□□□ -1.52
PSEN1-209ENST00000553855 NTM-AS1Q6ZSK4 140 aa5.58□□□□□ -1.52
PSEN1-209ENST00000553855 COMMD7Q86VX2 200 aa5.58□□□□□ -1.52
PSEN1-209ENST00000553855 Q8N976 141 aa5.58□□□□□ -1.52
PSEN1-209ENST00000553855 KIR2DL4Q99706 377 aa5.58□□□□□ -1.52
PSEN1-209ENST00000553855 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
PSEN1-209ENST00000553855 DNAH17Q9UFH2 4485 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms