RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 RYR3Q15413 4870 aa12.31□□□□□ -0.44
PSEN1-208ENST00000553719 COTL1Q14019 142 aa12.31□□□□□ -0.44
PSEN1-208ENST00000553719 PMCHP20382 165 aa12.3□□□□□ -0.44
PSEN1-208ENST00000553719 DEFB104AQ8WTQ1 72 aa12.3□□□□□ -0.44
PSEN1-208ENST00000553719 MAP1LC3AQ9H492 121 aa12.3□□□□□ -0.44
PSEN1-208ENST00000553719 IGHV1-24A0A0C4DH33 117 aa12.29□□□□□ -0.44
PSEN1-208ENST00000553719 LY6G6CO95867 125 aa12.29□□□□□ -0.44
PSEN1-208ENST00000553719 TRGC2P03986 189 aa12.29□□□□□ -0.44
PSEN1-208ENST00000553719 CHCHD7Q9BUK0 85 aa12.29□□□□□ -0.44
PSEN1-208ENST00000553719 TRBV25-1A0A075B6N4 114 aa12.28□□□□□ -0.44
PSEN1-208ENST00000553719 TRAV8-6A0A0B4J262 113 aa12.28□□□□□ -0.44
PSEN1-208ENST00000553719 DNAH10OSP0CZ25 163 aa12.28□□□□□ -0.44
PSEN1-208ENST00000553719 ESDP10768 282 aa12.28□□□□□ -0.44
PSEN1-208ENST00000553719 SIVA1O15304 175 aa12.27□□□□□ -0.45
PSEN1-208ENST00000553719 AMTP48728 403 aa12.27□□□□□ -0.45
PSEN1-208ENST00000553719 NIT1Q86X76 327 aa12.27□□□□□ -0.45
PSEN1-208ENST00000553719 Q8N8P6 123 aa12.27□□□□□ -0.45
PSEN1-208ENST00000553719 C18orf32Q8TCD1 76 aa12.27□□□□□ -0.45
PSEN1-208ENST00000553719 KIR2DL4Q99706 377 aa12.27□□□□□ -0.45
PSEN1-208ENST00000553719 Q9H8V8 135 aa12.27□□□□□ -0.45
PSEN1-208ENST00000553719 DNAH10Q8IVF4 4471 aa12.27□□□□□ -0.45
PSEN1-208ENST00000553719 LOC389332A0A1B0GUA5 103 aa12.26□□□□□ -0.45
PSEN1-208ENST00000553719 LINC01546A6NGU7 62 aa12.26□□□□□ -0.45
PSEN1-208ENST00000553719 LINC01556Q5JQF7 62 aa12.26□□□□□ -0.45
PSEN1-208ENST00000553719 TCAPO15273 167 aa12.25□□□□□ -0.45
PSEN1-208ENST00000553719 IFI27P40305 119 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-208ENST00000553719 Q8N3U1 123 aa12.25□□□□□ -0.45
PSEN1-208ENST00000553719 TMEM243Q9BU79 118 aa12.25□□□□□ -0.45
PSEN1-208ENST00000553719 NXT2Q9NPJ8 142 aaKnown RBP12.25□□□□□ -0.45
PSEN1-208ENST00000553719 URB1-AS1Q96HZ7 61 aa12.24□□□□□ -0.45
PSEN1-208ENST00000553719 KRTAP1-5Q9BYS1 174 aa12.24□□□□□ -0.45
PSEN1-208ENST00000553719 DNAH17Q9UFH2 4485 aa12.23□□□□□ -0.45
PSEN1-208ENST00000553719 K7EMI3 77 aa12.23□□□□□ -0.45
PSEN1-208ENST00000553719 FCER1GP30273 86 aa12.23□□□□□ -0.45
PSEN1-208ENST00000553719 CHCHD5Q9BSY4 110 aa12.23□□□□□ -0.45
PSEN1-208ENST00000553719 FRAS1Q86XX4 4008 aa12.23□□□□□ -0.45
PSEN1-208ENST00000553719 H7C423 109 aa12.22□□□□□ -0.45
PSEN1-208ENST00000553719 MPV17L2Q567V2 206 aa12.22□□□□□ -0.45
PSEN1-208ENST00000553719 Q6ZR54 194 aa12.22□□□□□ -0.45
PSEN1-208ENST00000553719 C20orf203Q8NBC4 194 aa12.22□□□□□ -0.45
PSEN1-208ENST00000553719 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-208ENST00000553719 NBDYA0A0U1RRE5 68 aa12.21□□□□□ -0.45
PSEN1-208ENST00000553719 IGKV2-29A2NJV5 120 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-208ENST00000553719 PKIAP61925 76 aa12.21□□□□□ -0.45
PSEN1-208ENST00000553719 GAGE6Q13070 117 aa12.21□□□□□ -0.45
PSEN1-208ENST00000553719 K7EP13 123 aa12.2□□□□□ -0.46
PSEN1-208ENST00000553719 A0A1B0GUV1 79 aa12.19□□□□□ -0.46
PSEN1-208ENST00000553719 RBX1P62877 108 aa12.19□□□□□ -0.46
PSEN1-208ENST00000553719 Q0VG73 95 aa12.19□□□□□ -0.46
PSEN1-208ENST00000553719 LAGE3Q14657 143 aa12.19□□□□□ -0.46
PSEN1-208ENST00000553719 ORMDL2Q53FV1 153 aa12.19□□□□□ -0.46
PSEN1-208ENST00000553719 MRPL52Q86TS9 123 aaKnown RBP12.19□□□□□ -0.46
PSEN1-208ENST00000553719 PRSS3P2Q8NHM4 247 aa12.19□□□□□ -0.46
PSEN1-208ENST00000553719 UBE2L6O14933 153 aa12.18□□□□□ -0.46
PSEN1-208ENST00000553719 IGHV3-30P01768 117 aa12.18□□□□□ -0.46
PSEN1-208ENST00000553719 IGHV3-33P01772 117 aa12.18□□□□□ -0.46
PSEN1-208ENST00000553719 IGHV3-30-3P0DP02 117 aa12.18□□□□□ -0.46
PSEN1-208ENST00000553719 IGHV3-30-5P0DP03 117 aa12.18□□□□□ -0.46
PSEN1-208ENST00000553719 FGF6P10767 208 aa12.18□□□□□ -0.46
PSEN1-208ENST00000553719 Q8N976 141 aa12.18□□□□□ -0.46
PSEN1-208ENST00000553719 FAT2Q9NYQ8 4349 aa12.18□□□□□ -0.46
PSEN1-208ENST00000553719 A0A087WX48 190 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 TMEM262E9PQX1 116 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 HIST1H2BKO60814 126 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 HIST1H2BJP06899 126 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 HIST1H2BOP23527 126 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 HIST1H2BBP33778 126 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 HIST1H2BDP58876 126 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 HIST1H2BCP62807 126 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 RPL39P62891 51 aaKnown RBP12.17□□□□□ -0.46
PSEN1-208ENST00000553719 HIST2H2BEQ16778 126 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 TTC32Q5I0X7 151 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.17□□□□□ -0.46
PSEN1-208ENST00000553719 HIST1H2BHQ93079 126 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 HIST1H2BNQ99877 126 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 HIST1H2BMQ99879 126 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 UBE2D4Q9Y2X8 147 aa12.17□□□□□ -0.46
PSEN1-208ENST00000553719 IGLV4-60A0A075B6I1 120 aa12.16□□□□□ -0.46
PSEN1-208ENST00000553719 ZNF25P17030 456 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-208ENST00000553719 LINC00310P59036 64 aa12.16□□□□□ -0.46
PSEN1-208ENST00000553719 FA2HQ7L5A8 372 aa12.16□□□□□ -0.46
PSEN1-208ENST00000553719 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
PSEN1-208ENST00000553719 FAM104AQ969W3 186 aa12.16□□□□□ -0.46
PSEN1-208ENST00000553719 TIMM21Q9BVV7 248 aa12.16□□□□□ -0.46
PSEN1-208ENST00000553719 AP5S1Q9NUS5 200 aa12.16□□□□□ -0.46
PSEN1-208ENST00000553719 A0A096LNJ9 63 aa12.15□□□□□ -0.46
PSEN1-208ENST00000553719 IBA57-AS1B1ANH7 110 aa12.15□□□□□ -0.46
PSEN1-208ENST00000553719 LINC00614P0C842 121 aa12.15□□□□□ -0.46
PSEN1-208ENST00000553719 CSDC2Q9Y534 153 aaKnown RBP12.15□□□□□ -0.46
PSEN1-208ENST00000553719 TRAV9-2A0A087WT02 112 aa12.14□□□□□ -0.47
PSEN1-208ENST00000553719 RAB5BP61020 215 aa12.14□□□□□ -0.47
PSEN1-208ENST00000553719 C2orf66Q6UXQ4 117 aa12.14□□□□□ -0.47
PSEN1-208ENST00000553719 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
PSEN1-208ENST00000553719 PRR34Q9NV39 138 aa12.14□□□□□ -0.47
PSEN1-208ENST00000553719 M0R2N4 97 aa12.13□□□□□ -0.47
PSEN1-208ENST00000553719 TOMM6Q96B49 74 aa12.13□□□□□ -0.47
PSEN1-208ENST00000553719 CHCHD1Q96BP2 118 aaKnown RBP12.13□□□□□ -0.47
PSEN1-208ENST00000553719 SPANXA1Q9NS26 97 aa12.13□□□□□ -0.47
PSEN1-208ENST00000553719 CYSLTR1Q9Y271 337 aa12.13□□□□□ -0.47
PSEN1-208ENST00000553719 BTF3P20290 206 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms