RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 MGPP08493 103 aa8.21□□□□□ -1.1
PRPF39-204ENST00000553605 CXCL1P09341 107 aa8.21□□□□□ -1.1
PRPF39-204ENST00000553605 FGF6P10767 208 aa8.21□□□□□ -1.1
PRPF39-204ENST00000553605 SUMO4Q6EEV6 95 aa8.21□□□□□ -1.1
PRPF39-204ENST00000553605 MPC2O95563 127 aa8.2□□□□□ -1.1
PRPF39-204ENST00000553605 LTAP01374 205 aa8.2□□□□□ -1.1
PRPF39-204ENST00000553605 MBP02144 154 aa8.2□□□□□ -1.1
PRPF39-204ENST00000553605 BCL2P10415 239 aa8.2□□□□□ -1.1
PRPF39-204ENST00000553605 XCL1P47992 114 aa8.2□□□□□ -1.1
PRPF39-204ENST00000553605 COTL1Q14019 142 aa8.2□□□□□ -1.1
PRPF39-204ENST00000553605 NKX6-2Q9C056 277 aaPredicted RBP8.2□□□□□ -1.1
PRPF39-204ENST00000553605 ACTR3CQ9C0K3 210 aaPredicted RBP8.2□□□□□ -1.1
PRPF39-204ENST00000553605 MED28Q9H204 178 aa8.2□□□□□ -1.1
PRPF39-204ENST00000553605 CCDC160A6NGH7 325 aa8.19□□□□□ -1.1
PRPF39-204ENST00000553605 PET100P0DJ07 73 aa8.19□□□□□ -1.1
PRPF39-204ENST00000553605 ATP6V0CP27449 155 aa8.19□□□□□ -1.1
PRPF39-204ENST00000553605 AMMECR1LQ6DCA0 310 aa8.19□□□□□ -1.1
PRPF39-204ENST00000553605 RASL11AQ6T310 242 aa8.19□□□□□ -1.1
PRPF39-204ENST00000553605 ISOC2Q96AB3 205 aa8.19□□□□□ -1.1
PRPF39-204ENST00000553605 CDIP1Q9H305 208 aa8.19□□□□□ -1.1
PRPF39-204ENST00000553605 CARHSP1Q9Y2V2 147 aaKnown RBP8.19□□□□□ -1.1
PRPF39-204ENST00000553605 FAM74A7A6NL05 159 aa8.18□□□□□ -1.1
PRPF39-204ENST00000553605 CAMPP49913 170 aa8.18□□□□□ -1.1
PRPF39-204ENST00000553605 LINC01547P58512 204 aaPredicted RBP8.18□□□□□ -1.1
PRPF39-204ENST00000553605 RNASEKQ6P5S7 137 aaKnown RBP8.18□□□□□ -1.1
PRPF39-204ENST00000553605 NIT2Q9NQR4 276 aa8.18□□□□□ -1.1
PRPF39-204ENST00000553605 FAM240BA0A1B0GVZ2 78 aa8.17□□□□□ -1.1
PRPF39-204ENST00000553605 CCL25O15444 150 aa8.17□□□□□ -1.1
PRPF39-204ENST00000553605 H2BFSP57053 126 aa8.17□□□□□ -1.1
PRPF39-204ENST00000553605 SERF2P84101 59 aa8.17□□□□□ -1.1
PRPF39-204ENST00000553605 KRTAP11-1Q8IUC1 163 aa8.17□□□□□ -1.1
PRPF39-204ENST00000553605 PSMG3Q9BT73 122 aaPredicted RBP8.17□□□□□ -1.1
PRPF39-204ENST00000553605 MLST8Q9BVC4 326 aa8.17□□□□□ -1.1
PRPF39-204ENST00000553605 IGLV4-69A0A075B6H9 119 aa8.16□□□□□ -1.1
PRPF39-204ENST00000553605 APOMO95445 188 aa8.16□□□□□ -1.1
PRPF39-204ENST00000553605 RPL18AQ02543 176 aaKnown RBP8.16□□□□□ -1.1
PRPF39-204ENST00000553605 NUP35Q8NFH5 326 aa8.16□□□□□ -1.1
PRPF39-204ENST00000553605 OR5A1Q8NGJ0 315 aa8.16□□□□□ -1.1
PRPF39-204ENST00000553605 TSKUQ8WUA8 353 aa8.16□□□□□ -1.1
PRPF39-204ENST00000553605 TNFSF18Q9UNG2 199 aa8.16□□□□□ -1.1
PRPF39-204ENST00000553605 LINC00959A0A1B0GUT2 108 aa8.15□□□□□ -1.1
PRPF39-204ENST00000553605 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.15□□□□□ -1.1
PRPF39-204ENST00000553605 MEF2BQ02080 365 aaPredicted RBP8.15□□□□□ -1.1
PRPF39-204ENST00000553605 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
PRPF39-204ENST00000553605 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.13□□□□□ -1.11
PRPF39-204ENST00000553605 IGKV2-29A2NJV5 120 aaPredicted RBP8.13□□□□□ -1.11
PRPF39-204ENST00000553605 H7C423 109 aa8.13□□□□□ -1.11
PRPF39-204ENST00000553605 ZNF726P1Q15940 193 aa8.13□□□□□ -1.11
PRPF39-204ENST00000553605 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
PRPF39-204ENST00000553605 AKR1C3P42330 323 aa8.12□□□□□ -1.11
PRPF39-204ENST00000553605 TPRXLQ17RH7 258 aa8.12□□□□□ -1.11
PRPF39-204ENST00000553605 CD164L2Q6UWJ8 174 aa8.12□□□□□ -1.11
PRPF39-204ENST00000553605 RPP21Q9H633 154 aaKnown RBP8.12□□□□□ -1.11
PRPF39-204ENST00000553605 CTXND1A0A1B0GTU2 59 aa8.11□□□□□ -1.11
PRPF39-204ENST00000553605 NTF3P20783 257 aa8.11□□□□□ -1.11
PRPF39-204ENST00000553605 SS18Q15532 418 aa8.11□□□□□ -1.11
PRPF39-204ENST00000553605 EIF5AL1Q6IS14 154 aaKnown RBP8.11□□□□□ -1.11
PRPF39-204ENST00000553605 OPRPNQ99935 248 aaPredicted RBP8.11□□□□□ -1.11
PRPF39-204ENST00000553605 RETNLBQ9BQ08 111 aa8.11□□□□□ -1.11
PRPF39-204ENST00000553605 CCDC32Q9BV29 185 aa8.11□□□□□ -1.11
PRPF39-204ENST00000553605 TPPP3Q9BW30 176 aa8.11□□□□□ -1.11
PRPF39-204ENST00000553605 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
PRPF39-204ENST00000553605 ZNF25P17030 456 aaPredicted RBP8.1□□□□□ -1.11
PRPF39-204ENST00000553605 MZT2BQ6NZ67 158 aa8.1□□□□□ -1.11
PRPF39-204ENST00000553605 Q6ZNX1 250 aa8.1□□□□□ -1.11
PRPF39-204ENST00000553605 STOML3Q8TAV4 291 aa8.1□□□□□ -1.11
PRPF39-204ENST00000553605 BTF3L4Q96K17 158 aa8.1□□□□□ -1.11
PRPF39-204ENST00000553605 TCEAL7Q9BRU2 100 aa8.1□□□□□ -1.11
PRPF39-204ENST00000553605 NCR2O95944 276 aa8.09□□□□□ -1.11
PRPF39-204ENST00000553605 MALP21145 153 aa8.09□□□□□ -1.11
PRPF39-204ENST00000553605 CST9LP1Q5W188 147 aa8.09□□□□□ -1.11
PRPF39-204ENST00000553605 TMEM101Q96IK0 257 aa8.09□□□□□ -1.11
PRPF39-204ENST00000553605 C2orf48Q96LS8 159 aa8.09□□□□□ -1.11
PRPF39-204ENST00000553605 BCL2L11O43521 198 aa8.08□□□□□ -1.12
PRPF39-204ENST00000553605 APCSP02743 223 aa8.08□□□□□ -1.12
PRPF39-204ENST00000553605 S100A9P06702 114 aaKnown RBP8.08□□□□□ -1.12
PRPF39-204ENST00000553605 FHITP49789 147 aa8.08□□□□□ -1.12
PRPF39-204ENST00000553605 BAGE2Q86Y30 109 aa8.08□□□□□ -1.12
PRPF39-204ENST00000553605 IGLC6P0CF74 106 aa8.07□□□□□ -1.12
PRPF39-204ENST00000553605 CRYGAP11844 174 aa8.07□□□□□ -1.12
PRPF39-204ENST00000553605 UBE2BP63146 152 aa8.07□□□□□ -1.12
PRPF39-204ENST00000553605 RNF151Q2KHN1 245 aa8.07□□□□□ -1.12
PRPF39-204ENST00000553605 FAM19A5Q7Z5A7 132 aaPredicted RBP8.07□□□□□ -1.12
PRPF39-204ENST00000553605 TYMSOSQ8TAI1 123 aa8.07□□□□□ -1.12
PRPF39-204ENST00000553605 IGLV7-46A0A075B6I9 117 aa8.06□□□□□ -1.12
PRPF39-204ENST00000553605 A0A087X002 238 aa8.06□□□□□ -1.12
PRPF39-204ENST00000553605 C19orf71A6NCJ1 209 aa8.06□□□□□ -1.12
PRPF39-204ENST00000553605 INMT-MINDY4F8WBC2 141 aa8.06□□□□□ -1.12
PRPF39-204ENST00000553605 TRGC1P0CF51 173 aa8.06□□□□□ -1.12
PRPF39-204ENST00000553605 ESDP10768 282 aa8.06□□□□□ -1.12
PRPF39-204ENST00000553605 OR2D3Q8NGH3 330 aa8.06□□□□□ -1.12
PRPF39-204ENST00000553605 COX7A2LO14548 114 aa8.05□□□□□ -1.12
PRPF39-204ENST00000553605 SSNA1O43805 119 aa8.05□□□□□ -1.12
PRPF39-204ENST00000553605 ZNF861PO60384 105 aa8.05□□□□□ -1.12
PRPF39-204ENST00000553605 GATD1Q8NB37 220 aa8.05□□□□□ -1.12
PRPF39-204ENST00000553605 ENKURQ8TC29 256 aa8.04□□□□□ -1.12
PRPF39-204ENST00000553605 CDC42SE2Q9NRR3 84 aa8.04□□□□□ -1.12
PRPF39-204ENST00000553605 IMMP2LQ96T52 175 aa8.03□□□□□ -1.12
PRPF39-204ENST00000553605 MAP1LC3B2A6NCE7 125 aa8.02□□□□□ -1.13
PRPF39-204ENST00000553605 F2Z2F3 143 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms