RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 AMTP48728 403 aa13.24□□□□□ -0.29
PSEN1-207ENST00000553599 Q8N8P6 123 aa13.24□□□□□ -0.29
PSEN1-207ENST00000553599 LCE6AA0A183 80 aa13.23□□□□□ -0.29
PSEN1-207ENST00000553599 K7EP13 123 aa13.23□□□□□ -0.29
PSEN1-207ENST00000553599 TRGC2P03986 189 aa13.23□□□□□ -0.29
PSEN1-207ENST00000553599 TMEM243Q9BU79 118 aa13.23□□□□□ -0.29
PSEN1-207ENST00000553599 CHCHD7Q9BUK0 85 aa13.23□□□□□ -0.29
PSEN1-207ENST00000553599 Q9H8V8 135 aa13.23□□□□□ -0.29
PSEN1-207ENST00000553599 IGLV2-18A0A075B6J9 118 aa13.22□□□□□ -0.29
PSEN1-207ENST00000553599 LOC389332A0A1B0GUA5 103 aa13.22□□□□□ -0.29
PSEN1-207ENST00000553599 H7C423 109 aa13.22□□□□□ -0.29
PSEN1-207ENST00000553599 CHCHD5Q9BSY4 110 aa13.22□□□□□ -0.29
PSEN1-207ENST00000553599 DNAH10OSP0CZ25 163 aa13.21□□□□□ -0.29
PSEN1-207ENST00000553599 WFDC10BQ8IUB3 73 aa13.21□□□□□ -0.29
PSEN1-207ENST00000553599 ESDP10768 282 aa13.2□□□□□ -0.3
PSEN1-207ENST00000553599 LINC01556Q5JQF7 62 aa13.2□□□□□ -0.3
PSEN1-207ENST00000553599 NIT1Q86X76 327 aa13.2□□□□□ -0.3
PSEN1-207ENST00000553599 PRSS3P2Q8NHM4 247 aa13.2□□□□□ -0.3
PSEN1-207ENST00000553599 C18orf32Q8TCD1 76 aa13.2□□□□□ -0.3
PSEN1-207ENST00000553599 TRAV9-2A0A087WT02 112 aa13.19□□□□□ -0.3
PSEN1-207ENST00000553599 UBE2L6O14933 153 aa13.19□□□□□ -0.3
PSEN1-207ENST00000553599 IFI27P40305 119 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-207ENST00000553599 ORMDL2Q53FV1 153 aa13.19□□□□□ -0.3
PSEN1-207ENST00000553599 TMEM18Q96B42 140 aa13.19□□□□□ -0.3
PSEN1-207ENST00000553599 ALMS1Q8TCU4 4167 aa13.18□□□□□ -0.3
PSEN1-207ENST00000553599 A0A087WX48 190 aa13.18□□□□□ -0.3
PSEN1-207ENST00000553599 SMAGPQ0VAQ4 97 aa13.18□□□□□ -0.3
PSEN1-207ENST00000553599 TTC32Q5I0X7 151 aa13.18□□□□□ -0.3
PSEN1-207ENST00000553599 LINC01546A6NGU7 62 aa13.17□□□□□ -0.3
PSEN1-207ENST00000553599 TMEM262E9PQX1 116 aa13.17□□□□□ -0.3
PSEN1-207ENST00000553599 G0S2P27469 103 aa13.17□□□□□ -0.3
PSEN1-207ENST00000553599 RAB5BP61020 215 aa13.17□□□□□ -0.3
PSEN1-207ENST00000553599 LAGE3Q14657 143 aa13.17□□□□□ -0.3
PSEN1-207ENST00000553599 C10orf126Q8N4M7 172 aa13.17□□□□□ -0.3
PSEN1-207ENST00000553599 DEFB104AQ8WTQ1 72 aa13.17□□□□□ -0.3
PSEN1-207ENST00000553599 LYSTQ99698 3801 aa13.17□□□□□ -0.3
PSEN1-207ENST00000553599 VPS13DQ5THJ4 4388 aa13.16□□□□□ -0.3
PSEN1-207ENST00000553599 A0A1B0GUV1 79 aa13.16□□□□□ -0.3
PSEN1-207ENST00000553599 FA2HQ7L5A8 372 aa13.16□□□□□ -0.3
PSEN1-207ENST00000553599 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
PSEN1-207ENST00000553599 ZNF25P17030 456 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-207ENST00000553599 Q0VG73 95 aa13.15□□□□□ -0.3
PSEN1-207ENST00000553599 GAGE6Q13070 117 aa13.15□□□□□ -0.3
PSEN1-207ENST00000553599 NBDYA0A0U1RRE5 68 aa13.14□□□□□ -0.31
PSEN1-207ENST00000553599 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.13□□□□□ -0.31
PSEN1-207ENST00000553599 IGKV2-29A2NJV5 120 aaPredicted RBP13.13□□□□□ -0.31
PSEN1-207ENST00000553599 LINC01549A6NIU2 74 aa13.13□□□□□ -0.31
PSEN1-207ENST00000553599 LINC00614P0C842 121 aa13.13□□□□□ -0.31
PSEN1-207ENST00000553599 AMMECR1LQ6DCA0 310 aa13.13□□□□□ -0.31
PSEN1-207ENST00000553599 MRPL52Q86TS9 123 aaKnown RBP13.13□□□□□ -0.31
PSEN1-207ENST00000553599 TIMM21Q9BVV7 248 aa13.13□□□□□ -0.31
PSEN1-207ENST00000553599 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
PSEN1-207ENST00000553599 DNAH1Q9P2D7 4330 aa13.12□□□□□ -0.31
PSEN1-207ENST00000553599 FGF6P10767 208 aa13.12□□□□□ -0.31
PSEN1-207ENST00000553599 BTF3P20290 206 aaKnown RBP13.12□□□□□ -0.31
PSEN1-207ENST00000553599 RBX1P62877 108 aa13.12□□□□□ -0.31
PSEN1-207ENST00000553599 MPV17L2Q567V2 206 aa13.12□□□□□ -0.31
PSEN1-207ENST00000553599 CSDC2Q9Y534 153 aaKnown RBP13.12□□□□□ -0.31
PSEN1-207ENST00000553599 IGHV3-30P01768 117 aa13.11□□□□□ -0.31
PSEN1-207ENST00000553599 IGHV3-33P01772 117 aa13.11□□□□□ -0.31
PSEN1-207ENST00000553599 IGHV3-30-3P0DP02 117 aa13.11□□□□□ -0.31
PSEN1-207ENST00000553599 IGHV3-30-5P0DP03 117 aa13.11□□□□□ -0.31
PSEN1-207ENST00000553599 BAGE3Q86Y29 109 aa13.11□□□□□ -0.31
PSEN1-207ENST00000553599 CHCHD1Q96BP2 118 aaKnown RBP13.11□□□□□ -0.31
PSEN1-207ENST00000553599 TMEM101Q96IK0 257 aa13.11□□□□□ -0.31
PSEN1-207ENST00000553599 C1orf196B1AJZ1 125 aa13.1□□□□□ -0.31
PSEN1-207ENST00000553599 RNASEKQ6P5S7 137 aaKnown RBP13.1□□□□□ -0.31
PSEN1-207ENST00000553599 Q6ZR54 194 aa13.1□□□□□ -0.31
PSEN1-207ENST00000553599 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
PSEN1-207ENST00000553599 CYSLTR1Q9Y271 337 aa13.1□□□□□ -0.31
PSEN1-207ENST00000553599 HIST1H2BKO60814 126 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 HIST1H2BJP06899 126 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 HIST1H2BOP23527 126 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 HIST1H2BBP33778 126 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 HIST1H2BDP58876 126 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 HIST1H2BCP62807 126 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 HIST2H2BEQ16778 126 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.09□□□□□ -0.31
PSEN1-207ENST00000553599 C2orf66Q6UXQ4 117 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 Q8N976 141 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 HIST1H2BHQ93079 126 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 URB1-AS1Q96HZ7 61 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 HIST1H2BNQ99877 126 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 HIST1H2BMQ99879 126 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 UBE2D4Q9Y2X8 147 aa13.09□□□□□ -0.31
PSEN1-207ENST00000553599 IBA57-AS1B1ANH7 110 aa13.08□□□□□ -0.32
PSEN1-207ENST00000553599 DGAT2L7PQ6IED9 249 aa13.08□□□□□ -0.32
PSEN1-207ENST00000553599 OR5A1Q8NGJ0 315 aa13.08□□□□□ -0.32
PSEN1-207ENST00000553599 PYGO1Q9Y3Y4 419 aa13.08□□□□□ -0.32
PSEN1-207ENST00000553599 ANGP03950 147 aaKnown RBP13.07□□□□□ -0.32
PSEN1-207ENST00000553599 NPSP0C0P6 89 aa13.07□□□□□ -0.32
PSEN1-207ENST00000553599 RPL39P62891 51 aaKnown RBP13.07□□□□□ -0.32
PSEN1-207ENST00000553599 Q8N3U1 123 aa13.07□□□□□ -0.32
PSEN1-207ENST00000553599 TRAV8-3A0A0A6YYJ7 113 aa13.06□□□□□ -0.32
PSEN1-207ENST00000553599 TOMM6Q96B49 74 aa13.06□□□□□ -0.32
PSEN1-207ENST00000553599 KRTAP1-5Q9BYS1 174 aa13.06□□□□□ -0.32
PSEN1-207ENST00000553599 KLK12Q9UKR0 248 aa13.06□□□□□ -0.32
PSEN1-207ENST00000553599 IGLV4-60A0A075B6I1 120 aa13.05□□□□□ -0.32
PSEN1-207ENST00000553599 MRPS36P82909 103 aaKnown RBP13.05□□□□□ -0.32
PSEN1-207ENST00000553599 PRR34Q9NV39 138 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms