RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 C14orf178Q8N769 122 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-222ENST00000553570 SLC25A29Q8N8R3 303 aa3.2□□□□□ -1.9
ATXN3-222ENST00000553570 OR10AG1Q8NH19 301 aa3.2□□□□□ -1.9
ATXN3-222ENST00000553570 ATP6V0E2Q8NHE4 81 aa3.2□□□□□ -1.9
ATXN3-222ENST00000553570 SMIM7Q9BQ49 75 aa3.2□□□□□ -1.9
ATXN3-222ENST00000553570 SAMD10Q9BYL1 202 aa3.2□□□□□ -1.9
ATXN3-222ENST00000553570 RNASE7Q9H1E1 156 aaKnown RBP3.2□□□□□ -1.9
ATXN3-222ENST00000553570 TRAV9-2A0A087WT02 112 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 TRAV8-6A0A0B4J262 113 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 NBDYA0A0U1RRE5 68 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 H3BNG1 76 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 SIVA1O15304 175 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 IGLV2-8P01709 118 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 IGHV3-30P01768 117 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 IGHV3-33P01772 117 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 SRP19P09132 144 aaKnown RBP3.19□□□□□ -1.9
ATXN3-222ENST00000553570 IGHV3-30-3P0DP02 117 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 IGHV3-30-5P0DP03 117 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 GATA1P15976 413 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-222ENST00000553570 RHOHQ15669 191 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 TMEM241Q24JQ0 296 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 LYZL1Q6UWQ5 148 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-222ENST00000553570 FER1L6-AS1Q8NA97 138 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 ZNRF2Q8NHG8 242 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 BORCS7Q96B45 105 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 SFRP2Q96HF1 295 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 PGLYRP4Q96LB8 373 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 C18orf15Q96N68 181 aa3.19□□□□□ -1.9
ATXN3-222ENST00000553570 TRBV6-4A0A1B0GX49 114 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 LINC00862A6NCI5 91 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 A8MWL6 223 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 TMEM262E9PQX1 116 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 F2Z2F3 143 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 TMEM250H0YL14 139 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 K7EN84 100 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 NTF3P20783 257 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 EVI2AP22794 236 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 CACNG7P62955 275 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 ADIRFQ15847 76 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 DNLZQ5SXM8 178 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 KCNIP4Q6PIL6 250 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 REG3GQ6UW15 175 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 ATRAIDQ6UW56 229 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 ZFP2Q6ZN57 461 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 SMIM15Q7Z3B0 74 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 SH2D6Q7Z4S9 175 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 COMMD7Q86VX2 200 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 C15orf54Q8N8G6 183 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 DEFB104AQ8WTQ1 72 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 PTH2Q96A98 100 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 RPP21Q9H633 154 aaKnown RBP3.18□□□□□ -1.9
ATXN3-222ENST00000553570 Q9UF83 564 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 MRPS16Q9Y3D3 137 aaKnown RBP3.18□□□□□ -1.9
ATXN3-222ENST00000553570 LY96Q9Y6Y9 160 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 URGCP-MRPS24S4R325 110 aa3.18□□□□□ -1.9
ATXN3-222ENST00000553570 DNAH7Q8WXX0 4024 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 TRBV20OR9-2A0A075B6H5 130 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 C19orf71A6NCJ1 209 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 PSCAO43653 123 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 CRYGDP07320 174 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 OR5AL1P0C617 328 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 TRGC1P0CF51 173 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 RAB4BP61018 213 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 LINC00242Q5T6M2 205 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 WFDC10BQ8IUB3 73 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 C6orf223Q8N319 242 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 LYPD6BQ8NI32 183 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 SMIM12Q96EX1 92 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 GTSF1LQ9H1H1 148 aa3.17□□□□□ -1.9
ATXN3-222ENST00000553570 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
ATXN3-222ENST00000553570 C9JQL5 133 aa3.16□□□□□ -1.9
ATXN3-222ENST00000553570 F8WDY8 70 aa3.16□□□□□ -1.9
ATXN3-222ENST00000553570 SNAI2O43623 268 aa3.16□□□□□ -1.9
ATXN3-222ENST00000553570 FAM74A3Q4VXF1 159 aa3.16□□□□□ -1.9
ATXN3-222ENST00000553570 TTC32Q5I0X7 151 aa3.16□□□□□ -1.9
ATXN3-222ENST00000553570 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
ATXN3-222ENST00000553570 UQCC3Q6UW78 93 aa3.16□□□□□ -1.9
ATXN3-222ENST00000553570 SLC7A5P1Q8MH63 180 aa3.16□□□□□ -1.9
ATXN3-222ENST00000553570 AP1S3Q96PC3 154 aa3.16□□□□□ -1.9
ATXN3-222ENST00000553570 NAT8Q9UHE5 227 aa3.16□□□□□ -1.9
ATXN3-222ENST00000553570 A0A087WWC5 75 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 A0A087WX48 190 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 A0A1B0GVY2 172 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 H7C1H1 209 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 RTL8CO15255 209 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 CXCL1P09341 107 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 IGLC6P0CF74 106 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 FOXA3P55318 350 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-222ENST00000553570 RPL23P62829 140 aaKnown RBP3.15□□□□□ -1.91
ATXN3-222ENST00000553570 LELP1Q5T871 98 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 Q6ZR54 194 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 LINC00336Q6ZUF6 198 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 LINC01551Q86U37 167 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 DPH3P1Q9H4G8 78 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 OSTCQ9NRP0 149 aa3.15□□□□□ -1.91
ATXN3-222ENST00000553570 STARD9Q9P2P6 4700 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 TRAV26-2A0A0B4J265 109 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 A0A1B0GUT8 65 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms