RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 AKAP6Q13023 2319 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 A0A0G2JMM0 328 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 A0A1W2PPB8 328 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 A0A1W2PRS3 328 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 BBIP1A8MTZ0 92 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 KIR3DP1A8MWS1 328 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 STATHP02808 62 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 DBIP07108 87 aaKnown RBP1.12□□□□□ -2.23
SYNE2-210ENST00000553455 COX7CP15954 63 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 CRYGSP22914 178 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 S100A3P33764 101 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 SELENOWP63302 87 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 ZCCHC23Q6ZST2 131 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 TEN1Q86WV5 123 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 OR5AS1Q8N127 324 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 FAM24BQ8N5W8 94 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 Q8N6K4 173 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 OR8J3Q8NGG0 315 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 C10orf82Q8WW14 230 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 CGREF1Q99674 301 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 LINC00470Q9BZP3 86 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 DPY30Q9C005 99 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 MAP1LC3BQ9GZQ8 125 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 TPT1P8Q9HAU6 139 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 MED11Q9P086 117 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 COL6A5A8TX70 2615 aa1.12□□□□□ -2.23
SYNE2-210ENST00000553455 FLNAP21333 2647 aaKnown RBP1.12□□□□□ -2.23
SYNE2-210ENST00000553455 DNHD1Q96M86 4753 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 CSPG4Q6UVK1 2322 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 ATRQ13535 2644 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 DNAH7Q8WXX0 4024 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 F8P00451 2351 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 TLN2Q9Y4G6 2542 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 TRAV36DV7A0A075B6V5 113 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 hDV103S1A0JD37 113 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 PRORSD1PA6NEY8 169 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 DEFB108AA8MXU0 73 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 H3BRM9 83 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 FXYD1O00168 92 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 NCR3O14931 201 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 TPST1O60507 370 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 FAM107AO95990 144 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 COX4I1P13073 169 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 POLR2HP52434 150 aaKnown RBP1.11□□□□□ -2.23
SYNE2-210ENST00000553455 RPL38P63173 70 aaKnown RBP1.11□□□□□ -2.23
SYNE2-210ENST00000553455 NCMAPQ5T1S8 102 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 C10orf128Q5T292 105 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 C10orf111Q8N326 155 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 ZNF431Q8TF32 576 aaPredicted RBP1.11□□□□□ -2.23
SYNE2-210ENST00000553455 WFDC6Q9BQY6 131 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 OR2H1Q9GZK4 316 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 CCDC167Q9P0B6 97 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.11□□□□□ -2.23
SYNE2-210ENST00000553455 NAV3Q8IVL0 2385 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 PKD1L1Q8TDX9 2849 aa1.11□□□□□ -2.23
SYNE2-210ENST00000553455 ABCA2Q9BZC7 2435 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 ABCA1O95477 2261 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 USF3Q68DE3 2245 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 A0A096LNT2 108 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 A0A1B0GWA3 101 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 TCRBV3S1A0A5B6 114 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 GPR31O00270 319 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 COX6B1P14854 86 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 EFNA4P52798 201 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 SMIM11AP58511 58 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 COPZ1P61923 177 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 PLGLB1Q02325 96 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 HAGHLQ6PII5 290 aaPredicted RBP1.1□□□□□ -2.23
SYNE2-210ENST00000553455 PRR15Q8IV56 129 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 DYDC1Q8WWB3 177 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 RMND5BQ96G75 393 aaPredicted RBP1.1□□□□□ -2.23
SYNE2-210ENST00000553455 ATPIF1Q9UII2 106 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 TNFSF18Q9UNG2 199 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 JMJD1CQ15652 2540 aa1.1□□□□□ -2.23
SYNE2-210ENST00000553455 DOCK11Q5JSL3 2073 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 A0A0G2JND7 137 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 MAP1LC3B2A6NCE7 125 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 C5orf58C9J3I9 102 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 H0YJX3 145 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 MRPL33O75394 65 aaKnown RBP1.09□□□□□ -2.23
SYNE2-210ENST00000553455 CST7O76096 145 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 CD14P08571 375 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 RPL35P42766 123 aaKnown RBP1.09□□□□□ -2.23
SYNE2-210ENST00000553455 FXYD6P3P58550 94 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 TMEM78Q5T7P6 136 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 RPL13AP3Q6NVV1 102 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 LRRC18Q8N456 261 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 FAM216BQ8N7L0 139 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 LZICQ8WZA0 190 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 BORCS8Q96FH0 119 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 CENPHQ9H3R5 247 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 TMEM138Q9NPI0 162 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 CBLN4Q9NTU7 201 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 LAMTOR3Q9UHA4 124 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 NUBP2Q9Y5Y2 271 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 C2CD3Q4AC94 2353 aa1.09□□□□□ -2.23
SYNE2-210ENST00000553455 SONP18583 2426 aaKnown RBP1.09□□□□□ -2.24
SYNE2-210ENST00000553455 NBEAL1Q6ZS30 2694 aa1.09□□□□□ -2.24
SYNE2-210ENST00000553455 STAB1Q9NY15 2570 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 DYNC2H1Q8NCM8 4307 aaKnown RBP1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms