RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 AMTP48728 403 aa12.29□□□□□ -0.44
CPSF2-202ENST00000553427 RBX1P62877 108 aa12.29□□□□□ -0.44
CPSF2-202ENST00000553427 HBBP68871 147 aa12.29□□□□□ -0.44
CPSF2-202ENST00000553427 GAGE6Q13070 117 aa12.29□□□□□ -0.44
CPSF2-202ENST00000553427 FAM104BQ5XKR9 115 aa12.29□□□□□ -0.44
CPSF2-202ENST00000553427 ATP5L2Q7Z4Y8 100 aa12.29□□□□□ -0.44
CPSF2-202ENST00000553427 PGPEP1Q9NXJ5 209 aa12.29□□□□□ -0.44
CPSF2-202ENST00000553427 RYR1P21817 5038 aa12.29□□□□□ -0.44
CPSF2-202ENST00000553427 A0A1B0GUV1 79 aa12.28□□□□□ -0.44
CPSF2-202ENST00000553427 GAS8-AS1O95177 125 aa12.28□□□□□ -0.44
CPSF2-202ENST00000553427 ADCYAP1P18509 176 aa12.28□□□□□ -0.44
CPSF2-202ENST00000553427 UBE2WQ96B02 151 aa12.28□□□□□ -0.44
CPSF2-202ENST00000553427 TMEM70Q9BUB7 260 aa12.28□□□□□ -0.44
CPSF2-202ENST00000553427 ST20Q9HBF5 79 aa12.28□□□□□ -0.44
CPSF2-202ENST00000553427 PRR34Q9NV39 138 aa12.28□□□□□ -0.44
CPSF2-202ENST00000553427 LINC00862A6NCI5 91 aa12.27□□□□□ -0.45
CPSF2-202ENST00000553427 I3L3M4 83 aa12.27□□□□□ -0.45
CPSF2-202ENST00000553427 ANGP03950 147 aaKnown RBP12.27□□□□□ -0.45
CPSF2-202ENST00000553427 RPS10P46783 165 aaKnown RBP12.27□□□□□ -0.45
CPSF2-202ENST00000553427 CAMPP49913 170 aa12.27□□□□□ -0.45
CPSF2-202ENST00000553427 COMMD7Q86VX2 200 aa12.27□□□□□ -0.45
CPSF2-202ENST00000553427 Q8N976 141 aa12.27□□□□□ -0.45
CPSF2-202ENST00000553427 TRBV27A0A0K0K1C4 114 aa12.26□□□□□ -0.45
CPSF2-202ENST00000553427 F8W036 122 aa12.26□□□□□ -0.45
CPSF2-202ENST00000553427 CRPP02741 224 aa12.26□□□□□ -0.45
CPSF2-202ENST00000553427 POLR2KP53803 58 aaKnown RBP12.26□□□□□ -0.45
CPSF2-202ENST00000553427 MRPL54Q6P161 138 aaKnown RBP12.26□□□□□ -0.45
CPSF2-202ENST00000553427 ENHOQ6UWT2 76 aa12.26□□□□□ -0.45
CPSF2-202ENST00000553427 NRACQ8N912 160 aa12.26□□□□□ -0.45
CPSF2-202ENST00000553427 SEC11CQ9BY50 192 aa12.26□□□□□ -0.45
CPSF2-202ENST00000553427 H7C423 109 aa12.25□□□□□ -0.45
CPSF2-202ENST00000553427 APCSP02743 223 aa12.25□□□□□ -0.45
CPSF2-202ENST00000553427 MIAQ16674 131 aa12.25□□□□□ -0.45
CPSF2-202ENST00000553427 MRPL51Q4U2R6 128 aaKnown RBP12.25□□□□□ -0.45
CPSF2-202ENST00000553427 APOBP04114 4563 aaKnown RBP12.25□□□□□ -0.45
CPSF2-202ENST00000553427 IGKV2D-24A0A075B6R9 120 aa12.24□□□□□ -0.45
CPSF2-202ENST00000553427 UBE2L6O14933 153 aa12.24□□□□□ -0.45
CPSF2-202ENST00000553427 PMCHP20382 165 aa12.24□□□□□ -0.45
CPSF2-202ENST00000553427 NTN5Q8WTR8 489 aaPredicted RBP12.24□□□□□ -0.45
CPSF2-202ENST00000553427 Q8N814 137 aa12.23□□□□□ -0.45
CPSF2-202ENST00000553427 MAPKAPK5-AS1Q8N8E1 139 aa12.23□□□□□ -0.45
CPSF2-202ENST00000553427 C20orf203Q8NBC4 194 aa12.23□□□□□ -0.45
CPSF2-202ENST00000553427 IMMP2LQ96T52 175 aa12.23□□□□□ -0.45
CPSF2-202ENST00000553427 C1orf43Q9BWL3 253 aa12.23□□□□□ -0.45
CPSF2-202ENST00000553427 TRBV24-1A0A075B6N3 115 aa12.22□□□□□ -0.45
CPSF2-202ENST00000553427 SMKR1H3BMG3 65 aa12.22□□□□□ -0.45
CPSF2-202ENST00000553427 TSHBP01222 138 aa12.22□□□□□ -0.45
CPSF2-202ENST00000553427 SUMO2P61956 95 aaKnown RBP12.22□□□□□ -0.45
CPSF2-202ENST00000553427 LINC00269Q8N2A0 174 aa12.22□□□□□ -0.45
CPSF2-202ENST00000553427 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
CPSF2-202ENST00000553427 CTDSP1Q9GZU7 261 aa12.22□□□□□ -0.45
CPSF2-202ENST00000553427 HSPG2P98160 4391 aa12.22□□□□□ -0.45
CPSF2-202ENST00000553427 IGLV4-60A0A075B6I1 120 aa12.21□□□□□ -0.45
CPSF2-202ENST00000553427 VCYO14598 125 aa12.21□□□□□ -0.45
CPSF2-202ENST00000553427 PPBPP02775 128 aa12.21□□□□□ -0.45
CPSF2-202ENST00000553427 ESDP10768 282 aa12.21□□□□□ -0.45
CPSF2-202ENST00000553427 RPL32P62910 135 aaKnown RBP12.21□□□□□ -0.45
CPSF2-202ENST00000553427 C10orf91Q5T1B1 145 aa12.21□□□□□ -0.45
CPSF2-202ENST00000553427 BTF3L4Q96K17 158 aa12.21□□□□□ -0.45
CPSF2-202ENST00000553427 C20orf78Q9BR46 151 aa12.21□□□□□ -0.45
CPSF2-202ENST00000553427 PHOX2AO14813 284 aa12.2□□□□□ -0.46
CPSF2-202ENST00000553427 CDK2AP2O75956 126 aa12.2□□□□□ -0.46
CPSF2-202ENST00000553427 CKS2P33552 79 aa12.2□□□□□ -0.46
CPSF2-202ENST00000553427 WFDC2Q14508 124 aa12.2□□□□□ -0.46
CPSF2-202ENST00000553427 TMEM242Q9NWH2 141 aa12.2□□□□□ -0.46
CPSF2-202ENST00000553427 ZNF25P17030 456 aaPredicted RBP12.19□□□□□ -0.46
CPSF2-202ENST00000553427 REG3AQ06141 175 aa12.19□□□□□ -0.46
CPSF2-202ENST00000553427 CARHSP1Q9Y2V2 147 aaKnown RBP12.19□□□□□ -0.46
CPSF2-202ENST00000553427 TRAV8-4A0A0B4J246 113 aa12.18□□□□□ -0.46
CPSF2-202ENST00000553427 BAALCQ8WXS3 180 aa12.18□□□□□ -0.46
CPSF2-202ENST00000553427 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.17□□□□□ -0.46
CPSF2-202ENST00000553427 TRAV9-1A0A075B6T8 112 aa12.17□□□□□ -0.46
CPSF2-202ENST00000553427 IGKV2-29A2NJV5 120 aaPredicted RBP12.17□□□□□ -0.46
CPSF2-202ENST00000553427 D6R8Y8 96 aa12.17□□□□□ -0.46
CPSF2-202ENST00000553427 TNFRSF6BO95407 300 aa12.17□□□□□ -0.46
CPSF2-202ENST00000553427 FGF6P10767 208 aa12.17□□□□□ -0.46
CPSF2-202ENST00000553427 AMMECR1LQ6DCA0 310 aa12.17□□□□□ -0.46
CPSF2-202ENST00000553427 KRTAP26-1Q6PEX3 210 aa12.17□□□□□ -0.46
CPSF2-202ENST00000553427 CLPSL2Q6UWE3 100 aa12.17□□□□□ -0.46
CPSF2-202ENST00000553427 KIR2DL4Q99706 377 aa12.17□□□□□ -0.46
CPSF2-202ENST00000553427 IGLV5-52A0A0A0MRZ9 124 aa12.16□□□□□ -0.46
CPSF2-202ENST00000553427 C7orf77A4D0Y5 90 aa12.16□□□□□ -0.46
CPSF2-202ENST00000553427 TCAPO15273 167 aa12.16□□□□□ -0.46
CPSF2-202ENST00000553427 MRPL52Q86TS9 123 aaKnown RBP12.16□□□□□ -0.46
CPSF2-202ENST00000553427 ORMDL3Q8N138 153 aa12.16□□□□□ -0.46
CPSF2-202ENST00000553427 DNAH8Q96JB1 4490 aa12.15□□□□□ -0.46
CPSF2-202ENST00000553427 LECT2O14960 151 aa12.15□□□□□ -0.46
CPSF2-202ENST00000553427 FCER1GP30273 86 aa12.15□□□□□ -0.46
CPSF2-202ENST00000553427 FUSP35637 526 aaKnown RBP eCLIP12.15□□□□□ -0.46
CPSF2-202ENST00000553427 SMIM2Q9BVW6 85 aa12.15□□□□□ -0.46
CPSF2-202ENST00000553427 LAMTOR2Q9Y2Q5 125 aa12.15□□□□□ -0.46
CPSF2-202ENST00000553427 NPYP01303 97 aa12.14□□□□□ -0.47
CPSF2-202ENST00000553427 RHEBQ15382 184 aa12.14□□□□□ -0.47
CPSF2-202ENST00000553427 C14orf177Q52M58 125 aa12.14□□□□□ -0.47
CPSF2-202ENST00000553427 RNASEKQ6P5S7 137 aaKnown RBP12.14□□□□□ -0.47
CPSF2-202ENST00000553427 GCSHP23434 173 aa12.13□□□□□ -0.47
CPSF2-202ENST00000553427 TMEM136Q6ZRR5 245 aa12.13□□□□□ -0.47
CPSF2-202ENST00000553427 SMAGPQ0VAQ4 97 aa12.12□□□□□ -0.47
CPSF2-202ENST00000553427 OR5A1Q8NGJ0 315 aa12.12□□□□□ -0.47
CPSF2-202ENST00000553427 TMEM101Q96IK0 257 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms