RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 A0A1B0GV50 99 aa5.61□□□□□ -1.51
SYNE2-209ENST00000553308 IGLC6P0CF74 106 aa5.61□□□□□ -1.51
SYNE2-209ENST00000553308 COTL1Q14019 142 aa5.61□□□□□ -1.51
SYNE2-209ENST00000553308 Q6ZRP5 223 aa5.61□□□□□ -1.51
SYNE2-209ENST00000553308 CHCHD10Q8WYQ3 142 aaPredicted RBP5.61□□□□□ -1.51
SYNE2-209ENST00000553308 GIPP09681 153 aaPredicted RBP5.6□□□□□ -1.51
SYNE2-209ENST00000553308 FER1L6-AS1Q8NA97 138 aa5.6□□□□□ -1.51
SYNE2-209ENST00000553308 LINC00526Q96FQ7 95 aa5.6□□□□□ -1.51
SYNE2-209ENST00000553308 NIT2Q9NQR4 276 aa5.6□□□□□ -1.51
SYNE2-209ENST00000553308 CYTL1Q9NRR1 136 aa5.6□□□□□ -1.51
SYNE2-209ENST00000553308 PFDN1O60925 122 aa5.59□□□□□ -1.51
SYNE2-209ENST00000553308 FOXI1Q12951 378 aa5.59□□□□□ -1.51
SYNE2-209ENST00000553308 LINC00474Q9P2X8 69 aa5.59□□□□□ -1.51
SYNE2-209ENST00000553308 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.58□□□□□ -1.52
SYNE2-209ENST00000553308 IGKV2-29A2NJV5 120 aaPredicted RBP5.58□□□□□ -1.52
SYNE2-209ENST00000553308 G3V3Q6 166 aa5.58□□□□□ -1.52
SYNE2-209ENST00000553308 RPL35P42766 123 aaKnown RBP5.58□□□□□ -1.52
SYNE2-209ENST00000553308 CACNG7P62955 275 aa5.58□□□□□ -1.52
SYNE2-209ENST00000553308 AMMECR1LQ6DCA0 310 aa5.58□□□□□ -1.52
SYNE2-209ENST00000553308 Q6ZNX1 250 aa5.58□□□□□ -1.52
SYNE2-209ENST00000553308 TMUB2Q71RG4 321 aa5.58□□□□□ -1.52
SYNE2-209ENST00000553308 OR2D3Q8NGH3 330 aa5.58□□□□□ -1.52
SYNE2-209ENST00000553308 FAM213BQ8TBF2 198 aa5.58□□□□□ -1.52
SYNE2-209ENST00000553308 SFT2D1Q8WV19 159 aa5.58□□□□□ -1.52
SYNE2-209ENST00000553308 CARD19Q96LW7 228 aa5.58□□□□□ -1.52
SYNE2-209ENST00000553308 TRAV26-2A0A0B4J265 109 aa5.57□□□□□ -1.52
SYNE2-209ENST00000553308 ARPC5O15511 151 aa5.57□□□□□ -1.52
SYNE2-209ENST00000553308 TRGC1P0CF51 173 aa5.57□□□□□ -1.52
SYNE2-209ENST00000553308 NTF3P20783 257 aa5.57□□□□□ -1.52
SYNE2-209ENST00000553308 XCL1P47992 114 aa5.57□□□□□ -1.52
SYNE2-209ENST00000553308 CENPWQ5EE01 88 aa5.57□□□□□ -1.52
SYNE2-209ENST00000553308 RNASEKQ6P5S7 137 aaKnown RBP5.57□□□□□ -1.52
SYNE2-209ENST00000553308 LYZL1Q6UWQ5 148 aa5.57□□□□□ -1.52
SYNE2-209ENST00000553308 MBD3L1Q8WWY6 194 aa5.57□□□□□ -1.52
SYNE2-209ENST00000553308 KRTAP9-2Q9BYQ4 174 aa5.57□□□□□ -1.52
SYNE2-209ENST00000553308 LPAP08519 4548 aa5.56□□□□□ -1.52
SYNE2-209ENST00000553308 C19orf71A6NCJ1 209 aa5.56□□□□□ -1.52
SYNE2-209ENST00000553308 FAM231BA6NCW3 169 aa5.56□□□□□ -1.52
SYNE2-209ENST00000553308 FGF6P10767 208 aa5.56□□□□□ -1.52
SYNE2-209ENST00000553308 PTTG1IPP53801 180 aa5.56□□□□□ -1.52
SYNE2-209ENST00000553308 RPS20P60866 119 aaKnown RBP5.56□□□□□ -1.52
SYNE2-209ENST00000553308 KCNRGQ8N5I3 272 aa5.56□□□□□ -1.52
SYNE2-209ENST00000553308 GATD1Q8NB37 220 aa5.56□□□□□ -1.52
SYNE2-209ENST00000553308 PKIGQ9Y2B9 76 aa5.56□□□□□ -1.52
SYNE2-209ENST00000553308 IGHV1-58A0A0C4DH39 117 aa5.55□□□□□ -1.52
SYNE2-209ENST00000553308 A0A1W2PNN7 141 aa5.55□□□□□ -1.52
SYNE2-209ENST00000553308 F2Z2F3 143 aa5.55□□□□□ -1.52
SYNE2-209ENST00000553308 CCL25O15444 150 aa5.55□□□□□ -1.52
SYNE2-209ENST00000553308 SYCNQ0VAF6 134 aa5.55□□□□□ -1.52
SYNE2-209ENST00000553308 GAGE2BQ13066 116 aa5.55□□□□□ -1.52
SYNE2-209ENST00000553308 OR5A1Q8NGJ0 315 aa5.55□□□□□ -1.52
SYNE2-209ENST00000553308 C11orf52Q96A22 123 aa5.55□□□□□ -1.52
SYNE2-209ENST00000553308 RPL39LQ96EH5 51 aaKnown RBP5.55□□□□□ -1.52
SYNE2-209ENST00000553308 PSORS1C2Q9UIG4 136 aa5.55□□□□□ -1.52
SYNE2-209ENST00000553308 LINC00959A0A1B0GUT2 108 aa5.54□□□□□ -1.52
SYNE2-209ENST00000553308 IFNA1P01562 189 aa5.54□□□□□ -1.52
SYNE2-209ENST00000553308 APCSP02743 223 aa5.54□□□□□ -1.52
SYNE2-209ENST00000553308 CTRLP40313 264 aa5.54□□□□□ -1.52
SYNE2-209ENST00000553308 PRR26Q8N8Z3 221 aa5.54□□□□□ -1.52
SYNE2-209ENST00000553308 LOC107984640A0A0U1RRK4 108 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 XKRY2A2RUG3 117 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 RAB19A4D1S5 217 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 UMAD1C9J7I0 102 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 H7C423 109 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 ZNF561-AS1K7EIQ3 104 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 NCR2O95944 276 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 MT-ND6P03923 174 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 H2AFB1P0C5Y9 115 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 BCL2P10415 239 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 ZNF25P17030 456 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-209ENST00000553308 ZNF664Q8N3J9 261 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 C9orf62Q8N4C0 152 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 GNG13Q9P2W3 67 aa5.53□□□□□ -1.52
SYNE2-209ENST00000553308 TRBV20OR9-2A0A075B6H5 130 aa5.52□□□□□ -1.53
SYNE2-209ENST00000553308 SDHAF1A6NFY7 115 aa5.52□□□□□ -1.53
SYNE2-209ENST00000553308 SMLR1H3BR10 107 aa5.52□□□□□ -1.53
SYNE2-209ENST00000553308 CAMPP49913 170 aa5.52□□□□□ -1.53
SYNE2-209ENST00000553308 GNG4P50150 75 aa5.52□□□□□ -1.53
SYNE2-209ENST00000553308 CCL20P78556 96 aa5.52□□□□□ -1.53
SYNE2-209ENST00000553308 TWIST1Q15672 202 aa5.52□□□□□ -1.53
SYNE2-209ENST00000553308 C9orf116Q5BN46 136 aaPredicted RBP5.52□□□□□ -1.53
SYNE2-209ENST00000553308 C1orf137Q5JT78 98 aa5.52□□□□□ -1.53
SYNE2-209ENST00000553308 CNFNQ9BYD5 112 aa5.52□□□□□ -1.53
SYNE2-209ENST00000553308 MANBALQ9NQG1 85 aa5.52□□□□□ -1.53
SYNE2-209ENST00000553308 IGLV4-69A0A075B6H9 119 aa5.51□□□□□ -1.53
SYNE2-209ENST00000553308 FOXA3P55318 350 aaPredicted RBP5.51□□□□□ -1.53
SYNE2-209ENST00000553308 CD164L2Q6UWJ8 174 aa5.51□□□□□ -1.53
SYNE2-209ENST00000553308 PHF5AQ7RTV0 110 aaKnown RBP5.51□□□□□ -1.53
SYNE2-209ENST00000553308 SMIM12Q96EX1 92 aa5.51□□□□□ -1.53
SYNE2-209ENST00000553308 TMEM101Q96IK0 257 aa5.51□□□□□ -1.53
SYNE2-209ENST00000553308 BTF3L4Q96K17 158 aa5.51□□□□□ -1.53
SYNE2-209ENST00000553308 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.5□□□□□ -1.53
SYNE2-209ENST00000553308 APOMO95445 188 aa5.5□□□□□ -1.53
SYNE2-209ENST00000553308 MEF2BQ02080 365 aaPredicted RBP5.5□□□□□ -1.53
SYNE2-209ENST00000553308 RPL18AQ02543 176 aaKnown RBP5.5□□□□□ -1.53
SYNE2-209ENST00000553308 SS18Q15532 418 aa5.5□□□□□ -1.53
SYNE2-209ENST00000553308 NUP35Q8NFH5 326 aa5.5□□□□□ -1.53
SYNE2-209ENST00000553308 NUDT10Q8NFP7 164 aa5.5□□□□□ -1.53
SYNE2-209ENST00000553308 ISOC2Q96AB3 205 aa5.5□□□□□ -1.53
SYNE2-209ENST00000553308 NUDT11Q96G61 164 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms