RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 RASL11AQ6T310 242 aa10.42□□□□□ -0.74
CDK4-215ENST00000553237 GFRA4Q9GZZ7 299 aa10.42□□□□□ -0.74
CDK4-215ENST00000553237 DNAH8Q96JB1 4490 aa10.41□□□□□ -0.74
CDK4-215ENST00000553237 TRBV25-1A0A075B6N4 114 aa10.41□□□□□ -0.74
CDK4-215ENST00000553237 FAM231BA6NCW3 169 aa10.41□□□□□ -0.74
CDK4-215ENST00000553237 PKIAP61925 76 aa10.41□□□□□ -0.74
CDK4-215ENST00000553237 RBX1P62877 108 aa10.41□□□□□ -0.74
CDK4-215ENST00000553237 CLPSL2Q6UWE3 100 aa10.41□□□□□ -0.74
CDK4-215ENST00000553237 BORCS7Q96B45 105 aa10.41□□□□□ -0.74
CDK4-215ENST00000553237 NIT2Q9NQR4 276 aa10.41□□□□□ -0.74
CDK4-215ENST00000553237 TRAV26-2A0A0B4J265 109 aa10.4□□□□□ -0.74
CDK4-215ENST00000553237 A0A1B0GUT8 65 aa10.4□□□□□ -0.74
CDK4-215ENST00000553237 Q6ZSA8 131 aa10.4□□□□□ -0.74
CDK4-215ENST00000553237 GATD1Q8NB37 220 aa10.4□□□□□ -0.74
CDK4-215ENST00000553237 DEFB104AQ8WTQ1 72 aa10.4□□□□□ -0.74
CDK4-215ENST00000553237 VPS13BQ7Z7G8 4022 aa10.4□□□□□ -0.74
CDK4-215ENST00000553237 IGHV1-24A0A0C4DH33 117 aa10.39□□□□□ -0.75
CDK4-215ENST00000553237 HLA-DQA1P01909 254 aa10.39□□□□□ -0.75
CDK4-215ENST00000553237 IQCJQ1A5X6 159 aa10.39□□□□□ -0.75
CDK4-215ENST00000553237 LINC00269Q8N2A0 174 aa10.39□□□□□ -0.75
CDK4-215ENST00000553237 IFITM2Q01629 132 aa10.38□□□□□ -0.75
CDK4-215ENST00000553237 CLLU1Q5K131 121 aa10.38□□□□□ -0.75
CDK4-215ENST00000553237 NUP35Q8NFH5 326 aa10.38□□□□□ -0.75
CDK4-215ENST00000553237 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
CDK4-215ENST00000553237 MIAQ16674 131 aa10.37□□□□□ -0.75
CDK4-215ENST00000553237 C14orf177Q52M58 125 aa10.37□□□□□ -0.75
CDK4-215ENST00000553237 NAT8BQ9UHF3 227 aa10.37□□□□□ -0.75
CDK4-215ENST00000553237 FLG2Q5D862 2391 aaPredicted RBP10.37□□□□□ -0.75
CDK4-215ENST00000553237 USP17L23D6RBM5 183 aa10.36□□□□□ -0.75
CDK4-215ENST00000553237 RIGQ13278 110 aa10.36□□□□□ -0.75
CDK4-215ENST00000553237 RPL39LQ96EH5 51 aaKnown RBP10.36□□□□□ -0.75
CDK4-215ENST00000553237 TMEM243Q9BU79 118 aa10.36□□□□□ -0.75
CDK4-215ENST00000553237 PRR34Q9NV39 138 aa10.36□□□□□ -0.75
CDK4-215ENST00000553237 SMIM27A0A1W2PRY6 76 aa10.35□□□□□ -0.75
CDK4-215ENST00000553237 SCXQ7RTU7 201 aa10.35□□□□□ -0.75
CDK4-215ENST00000553237 TMEM191AQ9H0A3 160 aa10.35□□□□□ -0.75
CDK4-215ENST00000553237 IGLV10-54A0A075B6I4 117 aa10.34□□□□□ -0.75
CDK4-215ENST00000553237 KRTAP26-1Q6PEX3 210 aa10.34□□□□□ -0.75
CDK4-215ENST00000553237 LINC00528Q8N1L1 170 aa10.34□□□□□ -0.75
CDK4-215ENST00000553237 C20orf203Q8NBC4 194 aa10.34□□□□□ -0.75
CDK4-215ENST00000553237 IGLV4-60A0A075B6I1 120 aa10.33□□□□□ -0.76
CDK4-215ENST00000553237 GAS8-AS1O95177 125 aa10.33□□□□□ -0.76
CDK4-215ENST00000553237 PRSS1P07477 247 aa10.33□□□□□ -0.76
CDK4-215ENST00000553237 REG3AQ06141 175 aa10.33□□□□□ -0.76
CDK4-215ENST00000553237 COTL1Q14019 142 aa10.33□□□□□ -0.76
CDK4-215ENST00000553237 RNF185Q96GF1 192 aa10.33□□□□□ -0.76
CDK4-215ENST00000553237 RAB4AP20338 218 aa10.32□□□□□ -0.76
CDK4-215ENST00000553237 AMTP48728 403 aa10.32□□□□□ -0.76
CDK4-215ENST00000553237 AMN1Q8IY45 258 aa10.32□□□□□ -0.76
CDK4-215ENST00000553237 CHAC1Q9BUX1 264 aa10.32□□□□□ -0.76
CDK4-215ENST00000553237 DMBT1Q9UGM3 2413 aaPredicted RBP10.32□□□□□ -0.76
CDK4-215ENST00000553237 SDHAF1A6NFY7 115 aa10.31□□□□□ -0.76
CDK4-215ENST00000553237 UBE2L6O14933 153 aa10.31□□□□□ -0.76
CDK4-215ENST00000553237 PLA2G1BP04054 148 aaKnown RBP10.31□□□□□ -0.76
CDK4-215ENST00000553237 TRBV6-5A0A0K0K1A5 114 aa10.3□□□□□ -0.76
CDK4-215ENST00000553237 A0A1B0GUV1 79 aa10.3□□□□□ -0.76
CDK4-215ENST00000553237 CAMPP49913 170 aa10.3□□□□□ -0.76
CDK4-215ENST00000553237 PNRC1Q12796 327 aaPredicted RBP10.3□□□□□ -0.76
CDK4-215ENST00000553237 CIRBP-AS1Q8TBR5 109 aa10.3□□□□□ -0.76
CDK4-215ENST00000553237 MRAP2Q96G30 205 aa10.3□□□□□ -0.76
CDK4-215ENST00000553237 PPP1R2P9O14990 202 aa10.29□□□□□ -0.76
CDK4-215ENST00000553237 MYCBP2O75592 4640 aa10.28□□□□□ -0.76
CDK4-215ENST00000553237 TRAV8-4A0A0B4J246 113 aa10.28□□□□□ -0.76
CDK4-215ENST00000553237 A0A1B0GW15 77 aa10.28□□□□□ -0.76
CDK4-215ENST00000553237 SMKR1H3BMG3 65 aa10.28□□□□□ -0.76
CDK4-215ENST00000553237 PMCHP20382 165 aa10.28□□□□□ -0.76
CDK4-215ENST00000553237 RPS10P46783 165 aaKnown RBP10.28□□□□□ -0.76
CDK4-215ENST00000553237 MRPL54Q6P161 138 aaKnown RBP10.28□□□□□ -0.76
CDK4-215ENST00000553237 UQCC3Q6UW78 93 aa10.28□□□□□ -0.76
CDK4-215ENST00000553237 ST20Q9HBF5 79 aa10.28□□□□□ -0.76
CDK4-215ENST00000553237 HERC1Q15751 4861 aa10.27□□□□□ -0.77
CDK4-215ENST00000553237 I3L3M4 83 aa10.27□□□□□ -0.77
CDK4-215ENST00000553237 NCR2O95944 276 aa10.27□□□□□ -0.77
CDK4-215ENST00000553237 FAM104BQ5XKR9 115 aa10.27□□□□□ -0.77
CDK4-215ENST00000553237 DGAT2L7PQ6IED9 249 aa10.27□□□□□ -0.77
CDK4-215ENST00000553237 IGKV3OR2-268A0A0C4DH90 116 aa10.26□□□□□ -0.77
CDK4-215ENST00000553237 hDV102S1A0JD36 115 aa10.26□□□□□ -0.77
CDK4-215ENST00000553237 MT-ND4LP03901 98 aa10.26□□□□□ -0.77
CDK4-215ENST00000553237 HBBP68871 147 aa10.26□□□□□ -0.77
CDK4-215ENST00000553237 MRPL51Q4U2R6 128 aaKnown RBP10.26□□□□□ -0.77
CDK4-215ENST00000553237 C9orf163Q8N9P6 203 aa10.26□□□□□ -0.77
CDK4-215ENST00000553237 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.25□□□□□ -0.77
CDK4-215ENST00000553237 A0A1B0GXF2 115 aa10.25□□□□□ -0.77
CDK4-215ENST00000553237 IGKV2-29A2NJV5 120 aaPredicted RBP10.25□□□□□ -0.77
CDK4-215ENST00000553237 TMEM218A2RU14 115 aa10.25□□□□□ -0.77
CDK4-215ENST00000553237 APCSP02743 223 aa10.25□□□□□ -0.77
CDK4-215ENST00000553237 S100A8P05109 93 aa10.25□□□□□ -0.77
CDK4-215ENST00000553237 POLR2KP53803 58 aaKnown RBP10.25□□□□□ -0.77
CDK4-215ENST00000553237 AMMECR1LQ6DCA0 310 aa10.25□□□□□ -0.77
CDK4-215ENST00000553237 CLRN3Q8NCR9 226 aa10.25□□□□□ -0.77
CDK4-215ENST00000553237 ANAPC16Q96DE5 110 aa10.25□□□□□ -0.77
CDK4-215ENST00000553237 PPP1R17O96001 155 aa10.24□□□□□ -0.77
CDK4-215ENST00000553237 ADCYAP1P18509 176 aa10.24□□□□□ -0.77
CDK4-215ENST00000553237 RNASEKQ6P5S7 137 aaKnown RBP10.24□□□□□ -0.77
CDK4-215ENST00000553237 COMMD7Q86VX2 200 aa10.24□□□□□ -0.77
CDK4-215ENST00000553237 NRACQ8N912 160 aa10.24□□□□□ -0.77
CDK4-215ENST00000553237 TMEM242Q9NWH2 141 aa10.24□□□□□ -0.77
CDK4-215ENST00000553237 TRBV27A0A0K0K1C4 114 aa10.23□□□□□ -0.77
CDK4-215ENST00000553237 GAGE12HA6NDE8 117 aa10.23□□□□□ -0.77
CDK4-215ENST00000553237 F8W036 122 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms