RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 RPL39P62891 51 aaKnown RBP13.85□□□□□ -0.19
RBFOX1-215ENST00000553186 MAJINQ3KP22 176 aa13.85□□□□□ -0.19
RBFOX1-215ENST00000553186 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.84□□□□□ -0.19
RBFOX1-215ENST00000553186 ERASQ7Z444 233 aa13.84□□□□□ -0.19
RBFOX1-215ENST00000553186 ZNRF2Q8NHG8 242 aa13.84□□□□□ -0.19
RBFOX1-215ENST00000553186 TRGV4A0A0C4DH28 118 aa13.83□□□□□ -0.19
RBFOX1-215ENST00000553186 IGIPA6NJ69 53 aa13.83□□□□□ -0.19
RBFOX1-215ENST00000553186 PRSS1P07477 247 aa13.83□□□□□ -0.19
RBFOX1-215ENST00000553186 LINC01549A6NIU2 74 aa13.83□□□□□ -0.2
RBFOX1-215ENST00000553186 C20orf203Q8NBC4 194 aa13.83□□□□□ -0.2
RBFOX1-215ENST00000553186 ZMAT4Q9H898 229 aa13.83□□□□□ -0.2
RBFOX1-215ENST00000553186 TRAV9-2A0A087WT02 112 aa13.82□□□□□ -0.2
RBFOX1-215ENST00000553186 ODF1Q14990 250 aa13.82□□□□□ -0.2
RBFOX1-215ENST00000553186 PHLDA1Q8WV24 401 aaPredicted RBP13.82□□□□□ -0.2
RBFOX1-215ENST00000553186 MGAM2Q2M2H8 2515 aa13.82□□□□□ -0.2
RBFOX1-215ENST00000553186 IGHV3-38A0A0C4DH36 116 aa13.82□□□□□ -0.2
RBFOX1-215ENST00000553186 RPL36AP83881 106 aaKnown RBP13.82□□□□□ -0.2
RBFOX1-215ENST00000553186 RPL36ALQ969Q0 106 aaKnown RBP13.82□□□□□ -0.2
RBFOX1-215ENST00000553186 UBE2D3P61077 147 aa13.81□□□□□ -0.2
RBFOX1-215ENST00000553186 UBE2D2P62837 147 aa13.81□□□□□ -0.2
RBFOX1-215ENST00000553186 MIEN1Q9BRT3 115 aa13.81□□□□□ -0.2
RBFOX1-215ENST00000553186 SPATA45Q537H7 98 aa13.8□□□□□ -0.2
RBFOX1-215ENST00000553186 Q6ZN92 141 aa13.8□□□□□ -0.2
RBFOX1-215ENST00000553186 CELA1Q9UNI1 258 aa13.8□□□□□ -0.2
RBFOX1-215ENST00000553186 LOC100131303A0A0U1RQF7 123 aa13.79□□□□□ -0.2
RBFOX1-215ENST00000553186 GAGE12JA6NER3 117 aa13.79□□□□□ -0.2
RBFOX1-215ENST00000553186 GAGE1Q13065 139 aa13.79□□□□□ -0.2
RBFOX1-215ENST00000553186 GAGE4Q13068 117 aa13.79□□□□□ -0.2
RBFOX1-215ENST00000553186 GAGE5Q13069 117 aa13.79□□□□□ -0.2
RBFOX1-215ENST00000553186 GAGE13Q4V321 117 aa13.79□□□□□ -0.2
RBFOX1-215ENST00000553186 BAALCQ8WXS3 180 aa13.79□□□□□ -0.2
RBFOX1-215ENST00000553186 TIMM17AQ99595 171 aa13.79□□□□□ -0.2
RBFOX1-215ENST00000553186 CHCHD7Q9BUK0 85 aa13.79□□□□□ -0.2
RBFOX1-215ENST00000553186 RETNQ9HD89 108 aa13.79□□□□□ -0.2
RBFOX1-215ENST00000553186 KPRPQ5T749 579 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-215ENST00000553186 hDV102S1A0JD36 115 aa13.78□□□□□ -0.2
RBFOX1-215ENST00000553186 PRB2P02812 416 aaPredicted RBP13.78□□□□□ -0.2
RBFOX1-215ENST00000553186 COTL1Q14019 142 aa13.78□□□□□ -0.2
RBFOX1-215ENST00000553186 DAZ4Q86SG3 579 aaKnown RBP13.78□□□□□ -0.2
RBFOX1-215ENST00000553186 DAZ3Q9NR90 486 aaKnown RBP13.78□□□□□ -0.2
RBFOX1-215ENST00000553186 HHLA3Q9XRX5 114 aa13.78□□□□□ -0.2
RBFOX1-215ENST00000553186 A0A087WX48 190 aa13.78□□□□□ -0.2
RBFOX1-215ENST00000553186 TRAV12-1A0A0B4J245 112 aa13.78□□□□□ -0.2
RBFOX1-215ENST00000553186 TMEM141Q96I45 108 aa13.78□□□□□ -0.2
RBFOX1-215ENST00000553186 PRADC1Q9BSG0 188 aa13.76□□□□□ -0.21
RBFOX1-215ENST00000553186 SPART-AS1P0CW21 52 aa13.76□□□□□ -0.21
RBFOX1-215ENST00000553186 LINC00694P0DN24 101 aa13.76□□□□□ -0.21
RBFOX1-215ENST00000553186 MRPL52Q86TS9 123 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-215ENST00000553186 MRPL35Q9NZE8 188 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-215ENST00000553186 DAD1P61803 113 aa13.75□□□□□ -0.21
RBFOX1-215ENST00000553186 K7EIL1 84 aa13.75□□□□□ -0.21
RBFOX1-215ENST00000553186 CRYBA4P53673 196 aa13.75□□□□□ -0.21
RBFOX1-215ENST00000553186 NTM-AS1Q6ZSK4 140 aa13.75□□□□□ -0.21
RBFOX1-215ENST00000553186 PRSS29PA6NIE9 313 aa13.74□□□□□ -0.21
RBFOX1-215ENST00000553186 FAM104AQ969W3 186 aa13.73□□□□□ -0.21
RBFOX1-215ENST00000553186 OPRPNQ99935 248 aaPredicted RBP13.73□□□□□ -0.21
RBFOX1-215ENST00000553186 PRO0255Q9UI72 69 aa13.73□□□□□ -0.21
RBFOX1-215ENST00000553186 PYGO1Q9Y3Y4 419 aa13.73□□□□□ -0.21
RBFOX1-215ENST00000553186 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.72□□□□□ -0.21
RBFOX1-215ENST00000553186 IGKV2-29A2NJV5 120 aaPredicted RBP13.72□□□□□ -0.21
RBFOX1-215ENST00000553186 HSBP1L1C9JCN9 74 aa13.72□□□□□ -0.21
RBFOX1-215ENST00000553186 F8VRH5 84 aa13.72□□□□□ -0.21
RBFOX1-215ENST00000553186 DPM2O94777 84 aa13.72□□□□□ -0.21
RBFOX1-215ENST00000553186 IGKCP01834 107 aa13.72□□□□□ -0.21
RBFOX1-215ENST00000553186 IGLC3P0DOY3 106 aa13.72□□□□□ -0.21
RBFOX1-215ENST00000553186 ZC2HC1BQ5TFG8 222 aa13.72□□□□□ -0.21
RBFOX1-215ENST00000553186 SBSPONQ8IVN8 264 aa13.72□□□□□ -0.21
RBFOX1-215ENST00000553186 PMVKQ15126 192 aa13.72□□□□□ -0.21
RBFOX1-215ENST00000553186 CST9LQ9H4G1 147 aa13.72□□□□□ -0.21
RBFOX1-215ENST00000553186 IGLV4-3A0A075B6K6 122 aa13.71□□□□□ -0.21
RBFOX1-215ENST00000553186 STPG4Q8N801 248 aa13.71□□□□□ -0.21
RBFOX1-215ENST00000553186 GTSF1LQ9H1H1 148 aa13.71□□□□□ -0.21
RBFOX1-215ENST00000553186 UQCR10Q9UDW1 63 aa13.71□□□□□ -0.21
RBFOX1-215ENST00000553186 UBE2D4Q9Y2X8 147 aa13.71□□□□□ -0.21
RBFOX1-215ENST00000553186 CHTOPQ9Y3Y2 248 aaKnown RBP13.71□□□□□ -0.21
RBFOX1-215ENST00000553186 ATP5G1P05496 136 aa13.71□□□□□ -0.22
RBFOX1-215ENST00000553186 ZNF25P17030 456 aaPredicted RBP13.71□□□□□ -0.22
RBFOX1-215ENST00000553186 CEMP1Q6PRD7 247 aaPredicted RBP13.71□□□□□ -0.22
RBFOX1-215ENST00000553186 GYPEP15421 78 aa13.7□□□□□ -0.22
RBFOX1-215ENST00000553186 PLNP26678 52 aa13.69□□□□□ -0.22
RBFOX1-215ENST00000553186 VSIG2Q96IQ7 327 aa13.69□□□□□ -0.22
RBFOX1-215ENST00000553186 C11orf68Q9H3H3 251 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-215ENST00000553186 TENM3Q9P273 2699 aa13.69□□□□□ -0.22
RBFOX1-215ENST00000553186 TEX48A0A1B0GUV7 120 aa13.69□□□□□ -0.22
RBFOX1-215ENST00000553186 ANKRD39Q53RE8 183 aa13.69□□□□□ -0.22
RBFOX1-215ENST00000553186 SPANXA1Q9NS26 97 aa13.69□□□□□ -0.22
RBFOX1-215ENST00000553186 PAX4O43316 350 aa13.68□□□□□ -0.22
RBFOX1-215ENST00000553186 NPSP0C0P6 89 aa13.68□□□□□ -0.22
RBFOX1-215ENST00000553186 C12orf74Q32Q52 190 aa13.68□□□□□ -0.22
RBFOX1-215ENST00000553186 IGLV4-69A0A075B6H9 119 aa13.67□□□□□ -0.22
RBFOX1-215ENST00000553186 BATFQ16520 125 aa13.67□□□□□ -0.22
RBFOX1-215ENST00000553186 AMELXQ99217 191 aa13.66□□□□□ -0.22
RBFOX1-215ENST00000553186 TIMM21Q9BVV7 248 aa13.66□□□□□ -0.22
RBFOX1-215ENST00000553186 DEFB121Q5J5C9 76 aa13.65□□□□□ -0.22
RBFOX1-215ENST00000553186 PAPPA-AS1Q5QFB9 102 aa13.65□□□□□ -0.22
RBFOX1-215ENST00000553186 VCX2Q9H322 139 aa13.65□□□□□ -0.22
RBFOX1-215ENST00000553186 A0A0J9YY99 117 aa13.65□□□□□ -0.22
RBFOX1-215ENST00000553186 F5H768 121 aa13.65□□□□□ -0.22
RBFOX1-215ENST00000553186 DLEU1O43261 78 aa13.65□□□□□ -0.22
RBFOX1-215ENST00000553186 TM2D3Q9BRN9 247 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms