RNA–Protein interactions for RNA: ENST00000552917.1

RFX4-212, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-212ENST00000552917 TMEM241Q24JQ0 296 aa8.04□□□□□ -1.12
RFX4-212ENST00000552917 A0A1B0GUV1 79 aa8.03□□□□□ -1.12
RFX4-212ENST00000552917 AMTP48728 403 aa8.03□□□□□ -1.12
RFX4-212ENST00000552917 PEA15Q15121 130 aa8.03□□□□□ -1.12
RFX4-212ENST00000552917 C14orf177Q52M58 125 aa8.03□□□□□ -1.12
RFX4-212ENST00000552917 CLPSL2Q6UWE3 100 aa8.03□□□□□ -1.12
RFX4-212ENST00000552917 DEFB104AQ8WTQ1 72 aa8.03□□□□□ -1.12
RFX4-212ENST00000552917 ISOC2Q96AB3 205 aa8.03□□□□□ -1.12
RFX4-212ENST00000552917 RPL39LQ96EH5 51 aaKnown RBP8.03□□□□□ -1.12
RFX4-212ENST00000552917 FAM30AQ9NZY2 134 aa8.03□□□□□ -1.12
RFX4-212ENST00000552917 C9JQL5 133 aa8.02□□□□□ -1.13
RFX4-212ENST00000552917 UBE2L6O14933 153 aa8.02□□□□□ -1.13
RFX4-212ENST00000552917 HLA-DQA1P01909 254 aa8.02□□□□□ -1.13
RFX4-212ENST00000552917 HAMPP81172 84 aa8.02□□□□□ -1.13
RFX4-212ENST00000552917 REG3AQ06141 175 aa8.02□□□□□ -1.13
RFX4-212ENST00000552917 C20orf203Q8NBC4 194 aa8.02□□□□□ -1.13
RFX4-212ENST00000552917 TMEM191AQ9H0A3 160 aa8.02□□□□□ -1.13
RFX4-212ENST00000552917 SMDT1Q9H4I9 107 aa8.02□□□□□ -1.13
RFX4-212ENST00000552917 V9GYV3 84 aa8.02□□□□□ -1.13
RFX4-212ENST00000552917 IGLV4-60A0A075B6I1 120 aa8.01□□□□□ -1.13
RFX4-212ENST00000552917 SDHAF1A6NFY7 115 aa8.01□□□□□ -1.13
RFX4-212ENST00000552917 NCR2O95944 276 aa8.01□□□□□ -1.13
RFX4-212ENST00000552917 SMR3BP02814 79 aaPredicted RBP8.01□□□□□ -1.13
RFX4-212ENST00000552917 RPL23P62829 140 aaKnown RBP8.01□□□□□ -1.13
RFX4-212ENST00000552917 NAT8Q9UHE5 227 aa8.01□□□□□ -1.13
RFX4-212ENST00000552917 DNAH8Q96JB1 4490 aa8□□□□□ -1.13
RFX4-212ENST00000552917 TRAV8-4A0A0B4J246 113 aa8□□□□□ -1.13
RFX4-212ENST00000552917 TRBV6-5A0A0K0K1A5 114 aa8□□□□□ -1.13
RFX4-212ENST00000552917 USP17L23D6RBM5 183 aa8□□□□□ -1.13
RFX4-212ENST00000552917 SRSF3P84103 164 aaKnown RBP8□□□□□ -1.13
RFX4-212ENST00000552917 RIGQ13278 110 aa8□□□□□ -1.13
RFX4-212ENST00000552917 ADIRFQ15847 76 aa8□□□□□ -1.13
RFX4-212ENST00000552917 LINC01620Q4KN68 170 aa8□□□□□ -1.13
RFX4-212ENST00000552917 Q5VSD8 79 aa8□□□□□ -1.13
RFX4-212ENST00000552917 KRTAP26-1Q6PEX3 210 aa8□□□□□ -1.13
RFX4-212ENST00000552917 Q6ZSA8 131 aa8□□□□□ -1.13
RFX4-212ENST00000552917 NUP35Q8NFH5 326 aa8□□□□□ -1.13
RFX4-212ENST00000552917 IGLV10-54A0A075B6I4 117 aa7.99□□□□□ -1.13
RFX4-212ENST00000552917 FAM229AH3BQW9 127 aa7.99□□□□□ -1.13
RFX4-212ENST00000552917 APCSP02743 223 aa7.99□□□□□ -1.13
RFX4-212ENST00000552917 NAT8BQ9UHF3 227 aa7.99□□□□□ -1.13
RFX4-212ENST00000552917 H7C423 109 aa7.98□□□□□ -1.13
RFX4-212ENST00000552917 I3L3M4 83 aa7.98□□□□□ -1.13
RFX4-212ENST00000552917 RAB4AP20338 218 aa7.98□□□□□ -1.13
RFX4-212ENST00000552917 PMCHP20382 165 aa7.98□□□□□ -1.13
RFX4-212ENST00000552917 AMN1Q8IY45 258 aa7.98□□□□□ -1.13
RFX4-212ENST00000552917 MRAP2Q96G30 205 aa7.98□□□□□ -1.13
RFX4-212ENST00000552917 RNF185Q96GF1 192 aa7.98□□□□□ -1.13
RFX4-212ENST00000552917 ST20Q9HBF5 79 aa7.98□□□□□ -1.13
RFX4-212ENST00000552917 GAS8-AS1O95177 125 aa7.97□□□□□ -1.13
RFX4-212ENST00000552917 PRSS1P07477 247 aa7.97□□□□□ -1.13
RFX4-212ENST00000552917 AMMECR1LQ6DCA0 310 aa7.97□□□□□ -1.13
RFX4-212ENST00000552917 DGAT2L7PQ6IED9 249 aa7.97□□□□□ -1.13
RFX4-212ENST00000552917 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.96□□□□□ -1.14
RFX4-212ENST00000552917 SMIM27A0A1W2PRY6 76 aa7.96□□□□□ -1.14
RFX4-212ENST00000552917 IGKV2-29A2NJV5 120 aaPredicted RBP7.96□□□□□ -1.14
RFX4-212ENST00000552917 INAFM2P0DMQ5 153 aa7.96□□□□□ -1.14
RFX4-212ENST00000552917 RNASEKQ6P5S7 137 aaKnown RBP7.96□□□□□ -1.14
RFX4-212ENST00000552917 CLRN3Q8NCR9 226 aa7.96□□□□□ -1.14
RFX4-212ENST00000552917 TSHBP01222 138 aa7.95□□□□□ -1.14
RFX4-212ENST00000552917 FGF6P10767 208 aa7.95□□□□□ -1.14
RFX4-212ENST00000552917 ZNF25P17030 456 aaPredicted RBP7.95□□□□□ -1.14
RFX4-212ENST00000552917 RPS10P46783 165 aaKnown RBP7.95□□□□□ -1.14
RFX4-212ENST00000552917 POLR2KP53803 58 aaKnown RBP7.95□□□□□ -1.14
RFX4-212ENST00000552917 TMEM242Q9NWH2 141 aa7.95□□□□□ -1.14
RFX4-212ENST00000552917 IGKV3OR2-268A0A0C4DH90 116 aa7.94□□□□□ -1.14
RFX4-212ENST00000552917 TRBV27A0A0K0K1C4 114 aa7.94□□□□□ -1.14
RFX4-212ENST00000552917 A0A1B0GW15 77 aa7.94□□□□□ -1.14
RFX4-212ENST00000552917 PPP1R17O96001 155 aa7.94□□□□□ -1.14
RFX4-212ENST00000552917 ESDP10768 282 aa7.94□□□□□ -1.14
RFX4-212ENST00000552917 RAB14P61106 215 aa7.94□□□□□ -1.14
RFX4-212ENST00000552917 SCXQ7RTU7 201 aa7.94□□□□□ -1.14
RFX4-212ENST00000552917 BTF3L4Q96K17 158 aa7.94□□□□□ -1.14
RFX4-212ENST00000552917 CHAC1Q9BUX1 264 aa7.94□□□□□ -1.14
RFX4-212ENST00000552917 SMKR1H3BMG3 65 aa7.93□□□□□ -1.14
RFX4-212ENST00000552917 VCYO14598 125 aa7.93□□□□□ -1.14
RFX4-212ENST00000552917 CAMPP49913 170 aa7.93□□□□□ -1.14
RFX4-212ENST00000552917 FAM104BQ5XKR9 115 aa7.93□□□□□ -1.14
RFX4-212ENST00000552917 C9orf163Q8N9P6 203 aa7.93□□□□□ -1.14
RFX4-212ENST00000552917 TMEM101Q96IK0 257 aa7.93□□□□□ -1.14
RFX4-212ENST00000552917 hDV102S1A0JD36 115 aa7.92□□□□□ -1.14
RFX4-212ENST00000552917 GAGE12HA6NDE8 117 aa7.92□□□□□ -1.14
RFX4-212ENST00000552917 SUMO2P61956 95 aaKnown RBP7.92□□□□□ -1.14
RFX4-212ENST00000552917 MRPL51Q4U2R6 128 aaKnown RBP7.92□□□□□ -1.14
RFX4-212ENST00000552917 NRACQ8N912 160 aa7.92□□□□□ -1.14
RFX4-212ENST00000552917 OR5A1Q8NGJ0 315 aa7.92□□□□□ -1.14
RFX4-212ENST00000552917 CHCHD10Q8WYQ3 142 aaPredicted RBP7.92□□□□□ -1.14
RFX4-212ENST00000552917 C7orf77A4D0Y5 90 aa7.91□□□□□ -1.14
RFX4-212ENST00000552917 LINC00862A6NCI5 91 aa7.91□□□□□ -1.14
RFX4-212ENST00000552917 PPP1R2P9O14990 202 aa7.91□□□□□ -1.14
RFX4-212ENST00000552917 S100A8P05109 93 aa7.91□□□□□ -1.14
RFX4-212ENST00000552917 FCER1GP30273 86 aa7.91□□□□□ -1.14
RFX4-212ENST00000552917 CNBPP62633 177 aaKnown RBP7.91□□□□□ -1.14
RFX4-212ENST00000552917 CFAP161Q6P656 301 aa7.91□□□□□ -1.14
RFX4-212ENST00000552917 MRPL52Q86TS9 123 aaKnown RBP7.91□□□□□ -1.14
RFX4-212ENST00000552917 LINC00528Q8N1L1 170 aa7.91□□□□□ -1.14
RFX4-212ENST00000552917 CIRBP-AS1Q8TBR5 109 aa7.91□□□□□ -1.14
RFX4-212ENST00000552917 AP5S1Q9NUS5 200 aa7.91□□□□□ -1.14
RFX4-212ENST00000552917 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.9□□□□□ -1.14
RFX4-212ENST00000552917 PLA2G1BP04054 148 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms