RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-210ENST00000552180 ABCA13Q86UQ4 5058 aa12.83□□□□□ -0.36
GPN3-210ENST00000552180 IGKV2D-24A0A075B6R9 120 aa12.82□□□□□ -0.36
GPN3-210ENST00000552180 TRBV6-5A0A0K0K1A5 114 aa12.82□□□□□ -0.36
GPN3-210ENST00000552180 ANGP03950 147 aaKnown RBP12.82□□□□□ -0.36
GPN3-210ENST00000552180 RIGQ13278 110 aa12.82□□□□□ -0.36
GPN3-210ENST00000552180 TMEM243Q9BU79 118 aa12.82□□□□□ -0.36
GPN3-210ENST00000552180 PRR34Q9NV39 138 aa12.82□□□□□ -0.36
GPN3-210ENST00000552180 KRTAP10-1P60331 282 aa12.81□□□□□ -0.36
GPN3-210ENST00000552180 COTL1Q14019 142 aa12.81□□□□□ -0.36
GPN3-210ENST00000552180 BAALCQ8WXS3 180 aa12.81□□□□□ -0.36
GPN3-210ENST00000552180 A0A1B0GUV1 79 aa12.8□□□□□ -0.36
GPN3-210ENST00000552180 SDHAF1A6NFY7 115 aa12.8□□□□□ -0.36
GPN3-210ENST00000552180 AMN1Q8IY45 258 aa12.8□□□□□ -0.36
GPN3-210ENST00000552180 NTN5Q8WTR8 489 aaPredicted RBP12.8□□□□□ -0.36
GPN3-210ENST00000552180 LECT2O14960 151 aa12.79□□□□□ -0.36
GPN3-210ENST00000552180 C20orf203Q8NBC4 194 aa12.79□□□□□ -0.36
GPN3-210ENST00000552180 IGLV4-60A0A075B6I1 120 aa12.78□□□□□ -0.36
GPN3-210ENST00000552180 RPS10P46783 165 aaKnown RBP12.78□□□□□ -0.36
GPN3-210ENST00000552180 AMTP48728 403 aa12.78□□□□□ -0.36
GPN3-210ENST00000552180 LINC00269Q8N2A0 174 aa12.78□□□□□ -0.36
GPN3-210ENST00000552180 MRAP2Q96G30 205 aa12.78□□□□□ -0.36
GPN3-210ENST00000552180 IGLV5-52A0A0A0MRZ9 124 aa12.77□□□□□ -0.37
GPN3-210ENST00000552180 NCR2O95944 276 aa12.77□□□□□ -0.37
GPN3-210ENST00000552180 CRPP02741 224 aa12.77□□□□□ -0.37
GPN3-210ENST00000552180 GCSHP23434 173 aa12.77□□□□□ -0.37
GPN3-210ENST00000552180 MIAQ16674 131 aa12.77□□□□□ -0.37
GPN3-210ENST00000552180 KRTAP26-1Q6PEX3 210 aa12.77□□□□□ -0.37
GPN3-210ENST00000552180 C1orf43Q9BWL3 253 aa12.77□□□□□ -0.37
GPN3-210ENST00000552180 POLR2KP53803 58 aaKnown RBP12.76□□□□□ -0.37
GPN3-210ENST00000552180 FAM104BQ5XKR9 115 aa12.76□□□□□ -0.37
GPN3-210ENST00000552180 TMEM70Q9BUB7 260 aa12.76□□□□□ -0.37
GPN3-210ENST00000552180 A0A1B0GW15 77 aa12.75□□□□□ -0.37
GPN3-210ENST00000552180 I3L3M4 83 aa12.75□□□□□ -0.37
GPN3-210ENST00000552180 ST20Q9HBF5 79 aa12.75□□□□□ -0.37
GPN3-210ENST00000552180 A0A1B0GXF2 115 aa12.74□□□□□ -0.37
GPN3-210ENST00000552180 SMKR1H3BMG3 65 aa12.74□□□□□ -0.37
GPN3-210ENST00000552180 PMCHP20382 165 aa12.74□□□□□ -0.37
GPN3-210ENST00000552180 CAMPP49913 170 aa12.74□□□□□ -0.37
GPN3-210ENST00000552180 XGP55808 180 aa12.74□□□□□ -0.37
GPN3-210ENST00000552180 REG3AQ06141 175 aa12.74□□□□□ -0.37
GPN3-210ENST00000552180 CLPSL2Q6UWE3 100 aa12.74□□□□□ -0.37
GPN3-210ENST00000552180 NRACQ8N912 160 aa12.74□□□□□ -0.37
GPN3-210ENST00000552180 KRTAP4-5Q9BYR2 181 aa12.74□□□□□ -0.37
GPN3-210ENST00000552180 FAT1Q14517 4588 aa12.73□□□□□ -0.37
GPN3-210ENST00000552180 TRBV27A0A0K0K1C4 114 aa12.73□□□□□ -0.37
GPN3-210ENST00000552180 UBE2L6O14933 153 aa12.73□□□□□ -0.37
GPN3-210ENST00000552180 PPP1R2P9O14990 202 aa12.73□□□□□ -0.37
GPN3-210ENST00000552180 TSHBP01222 138 aa12.73□□□□□ -0.37
GPN3-210ENST00000552180 PNRC1Q12796 327 aaPredicted RBP12.73□□□□□ -0.37
GPN3-210ENST00000552180 MRPL51Q4U2R6 128 aaKnown RBP12.73□□□□□ -0.37
GPN3-210ENST00000552180 H7C423 109 aa12.72□□□□□ -0.37
GPN3-210ENST00000552180 APCSP02743 223 aa12.72□□□□□ -0.37
GPN3-210ENST00000552180 ESDP10768 282 aa12.72□□□□□ -0.37
GPN3-210ENST00000552180 MRPL54Q6P161 138 aaKnown RBP12.72□□□□□ -0.37
GPN3-210ENST00000552180 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.71□□□□□ -0.37
GPN3-210ENST00000552180 IGKV2-29A2NJV5 120 aaPredicted RBP12.71□□□□□ -0.37
GPN3-210ENST00000552180 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.7□□□□□ -0.38
GPN3-210ENST00000552180 HBBP68871 147 aa12.7□□□□□ -0.38
GPN3-210ENST00000552180 UQCC3Q6UW78 93 aa12.7□□□□□ -0.38
GPN3-210ENST00000552180 TMEM242Q9NWH2 141 aa12.7□□□□□ -0.38
GPN3-210ENST00000552180 TRAV8-4A0A0B4J246 113 aa12.69□□□□□ -0.38
GPN3-210ENST00000552180 LINC00862A6NCI5 91 aa12.69□□□□□ -0.38
GPN3-210ENST00000552180 PPP1R17O96001 155 aa12.69□□□□□ -0.38
GPN3-210ENST00000552180 ANAPC16Q96DE5 110 aa12.69□□□□□ -0.38
GPN3-210ENST00000552180 VPS13BQ7Z7G8 4022 aa12.69□□□□□ -0.38
GPN3-210ENST00000552180 IGLV10-54A0A075B6I4 117 aa12.68□□□□□ -0.38
GPN3-210ENST00000552180 TRBV24-1A0A075B6N3 115 aa12.68□□□□□ -0.38
GPN3-210ENST00000552180 VCYO14598 125 aa12.68□□□□□ -0.38
GPN3-210ENST00000552180 MT-ND4LP03901 98 aa12.68□□□□□ -0.38
GPN3-210ENST00000552180 S100A8P05109 93 aa12.68□□□□□ -0.38
GPN3-210ENST00000552180 FGF6P10767 208 aa12.68□□□□□ -0.38
GPN3-210ENST00000552180 ADCYAP1P18509 176 aa12.68□□□□□ -0.38
GPN3-210ENST00000552180 SUMO2P61956 95 aaKnown RBP12.68□□□□□ -0.38
GPN3-210ENST00000552180 Q8N1X5 172 aa12.68□□□□□ -0.38
GPN3-210ENST00000552180 TMEM218A2RU14 115 aa12.67□□□□□ -0.38
GPN3-210ENST00000552180 USP17L23D6RBM5 183 aa12.67□□□□□ -0.38
GPN3-210ENST00000552180 HLA-DQA1P01909 254 aa12.67□□□□□ -0.38
GPN3-210ENST00000552180 ATP5L2Q7Z4Y8 100 aa12.67□□□□□ -0.38
GPN3-210ENST00000552180 FAM30AQ9NZY2 134 aa12.67□□□□□ -0.38
GPN3-210ENST00000552180 F8W036 122 aa12.66□□□□□ -0.38
GPN3-210ENST00000552180 CKS2P33552 79 aa12.66□□□□□ -0.38
GPN3-210ENST00000552180 AMMECR1LQ6DCA0 310 aa12.66□□□□□ -0.38
GPN3-210ENST00000552180 C14orf177Q52M58 125 aa12.65□□□□□ -0.38
GPN3-210ENST00000552180 RNASEKQ6P5S7 137 aaKnown RBP12.65□□□□□ -0.38
GPN3-210ENST00000552180 C20orf78Q9BR46 151 aa12.65□□□□□ -0.38
GPN3-210ENST00000552180 ZNF25P17030 456 aaPredicted RBP12.64□□□□□ -0.39
GPN3-210ENST00000552180 RPL32P62910 135 aaKnown RBP12.64□□□□□ -0.39
GPN3-210ENST00000552180 MRPL52Q86TS9 123 aaKnown RBP12.64□□□□□ -0.39
GPN3-210ENST00000552180 D6R8Y8 96 aa12.63□□□□□ -0.39
GPN3-210ENST00000552180 TNFRSF6BO95407 300 aa12.63□□□□□ -0.39
GPN3-210ENST00000552180 PRSS1P07477 247 aa12.63□□□□□ -0.39
GPN3-210ENST00000552180 LINC01620Q4KN68 170 aa12.63□□□□□ -0.39
GPN3-210ENST00000552180 Q6ZSA8 131 aa12.63□□□□□ -0.39
GPN3-210ENST00000552180 C7orf77A4D0Y5 90 aa12.62□□□□□ -0.39
GPN3-210ENST00000552180 PPBPP02775 128 aa12.61□□□□□ -0.39
GPN3-210ENST00000552180 COMMD7Q86VX2 200 aa12.61□□□□□ -0.39
GPN3-210ENST00000552180 KIR2DL4Q99706 377 aa12.61□□□□□ -0.39
GPN3-210ENST00000552180 CDC42SE2Q9NRR3 84 aa12.61□□□□□ -0.39
GPN3-210ENST00000552180 IGKV3OR2-268A0A0C4DH90 116 aa12.6□□□□□ -0.39
GPN3-210ENST00000552180 PHOX2AO14813 284 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms