RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 H3BMQ9 156 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 M0R036 132 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 MBP02144 154 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 TCRAP04437 139 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 IGKV2-30P06310 120 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 ARMS2P0C7Q2 107 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 BTCP35070 178 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 CACNG7P62955 275 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 FLI1Q01543 452 aaPredicted RBP3.27□□□□□ -1.89
HOXB3-213ENST00000552000 IL15RAQ13261 267 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 COTL1Q14019 142 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 NTM-AS1Q6ZSK4 140 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 ZNF664Q8N3J9 261 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 C15orf56Q8N910 161 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 C5orf17Q8NAS9 161 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 SEC22CQ9BRL7 303 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 GFRA4Q9GZZ7 299 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 NUDT15Q9NV35 164 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 CSDC2Q9Y534 153 aaKnown RBP3.27□□□□□ -1.89
HOXB3-213ENST00000552000 PHLDA3Q9Y5J5 127 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 TRBV25-1A0A075B6N4 114 aa3.26□□□□□ -1.89
HOXB3-213ENST00000552000 TRAV8-4A0A0B4J246 113 aa3.26□□□□□ -1.89
HOXB3-213ENST00000552000 A0A1W2PPV4 95 aa3.26□□□□□ -1.89
HOXB3-213ENST00000552000 FABP5P3A8MUU1 101 aa3.26□□□□□ -1.89
HOXB3-213ENST00000552000 HMGB3O15347 200 aaKnown RBP3.26□□□□□ -1.89
HOXB3-213ENST00000552000 P01737 135 aa3.26□□□□□ -1.89
HOXB3-213ENST00000552000 TPT1P13693 172 aaKnown RBP3.26□□□□□ -1.89
HOXB3-213ENST00000552000 ZNF56Q15929 161 aa3.26□□□□□ -1.89
HOXB3-213ENST00000552000 TRIQKQ629K1 86 aa3.26□□□□□ -1.89
HOXB3-213ENST00000552000 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.26□□□□□ -1.89
HOXB3-213ENST00000552000 C20orf203Q8NBC4 194 aa3.26□□□□□ -1.89
HOXB3-213ENST00000552000 DERL1Q9BUN8 251 aa3.26□□□□□ -1.89
HOXB3-213ENST00000552000 IGLV4-60A0A075B6I1 120 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 TRAV6A0A075B6T7 132 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 TMSB15BA0A087X1C1 80 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 TRBV6-1A0A0K0K1D8 114 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 CENPXA8MT69 81 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 KRBOX1C9JBD0 128 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 ARL14EPLP0DKL9 152 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 GZMBP10144 247 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 RAB4BP61018 213 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 RAB2AP61019 212 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 LRRC37A5PQ49AS3 106 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 TMEM97Q5BJF2 176 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 SAPCD1Q5SSQ6 148 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 DNLZQ5SXM8 178 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 ZFP82Q8N141 532 aa3.25□□□□□ -1.89
HOXB3-213ENST00000552000 IGHV1-24A0A0C4DH33 117 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 IGKV3OR2-268A0A0C4DH90 116 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 TEX46H3BTG2 121 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 SH2D1AO60880 128 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 MT-ND6P03923 174 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 S100A5P33763 92 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 SULT1A2P50226 295 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 CRIP1P50238 77 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 TMBIM6P55061 237 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 DEFA3P59666 94 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 IQCJQ1A5X6 159 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 CNPY1Q3B7I2 92 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 SUMO4Q6EEV6 95 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 UQCC3Q6UW78 93 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 LINC00518Q8N0U6 118 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 INO80EQ8NBZ0 244 aaPredicted RBP3.24□□□□□ -1.89
HOXB3-213ENST00000552000 SCGB1C1Q8TD33 95 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 SMIM3Q9BZL3 60 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 LINC00474Q9P2X8 69 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 EPDR1Q9UM22 224 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 ARL2-SNX15V9GYD0 113 aa3.24□□□□□ -1.89
HOXB3-213ENST00000552000 GVQW2A0A096LPI5 108 aaPredicted RBP3.23□□□□□ -1.89
HOXB3-213ENST00000552000 A0A1B0GUV1 79 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 SIX6O95475 246 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 GCHFRP30047 84 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 C1orf137Q5JT78 98 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 Q86TA4 180 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 FER1L6-AS1Q8NA97 138 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 OR10AG1Q8NH19 301 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 DIRC1Q969H9 104 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 LINC00526Q96FQ7 95 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 URB1-AS1Q96HZ7 61 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 AQP10Q96PS8 301 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 TMEM243Q9BU79 118 aa3.23□□□□□ -1.89
HOXB3-213ENST00000552000 RBM38Q9H0Z9 239 aaKnown RBP3.23□□□□□ -1.89
HOXB3-213ENST00000552000 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
HOXB3-213ENST00000552000 MUC21A0A140T8X8 626 aa3.22□□□□□ -1.89
HOXB3-213ENST00000552000 A0A1W2PNN7 141 aa3.22□□□□□ -1.89
HOXB3-213ENST00000552000 TSPAN13O95857 204 aa3.22□□□□□ -1.89
HOXB3-213ENST00000552000 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
HOXB3-213ENST00000552000 AMTP48728 403 aa3.22□□□□□ -1.89
HOXB3-213ENST00000552000 CDC34P49427 236 aaPredicted RBP3.22□□□□□ -1.89
HOXB3-213ENST00000552000 FAM162BQ5T6X4 162 aa3.22□□□□□ -1.89
HOXB3-213ENST00000552000 CHCHD10Q8WYQ3 142 aaPredicted RBP3.22□□□□□ -1.89
HOXB3-213ENST00000552000 CARD19Q96LW7 228 aa3.22□□□□□ -1.89
HOXB3-213ENST00000552000 SDHCQ99643 169 aaPredicted RBP3.22□□□□□ -1.89
HOXB3-213ENST00000552000 ZNF471Q9BX82 626 aaPredicted RBP3.22□□□□□ -1.89
HOXB3-213ENST00000552000 PKIGQ9Y2B9 76 aa3.22□□□□□ -1.89
HOXB3-213ENST00000552000 HSPB11Q9Y547 144 aa3.22□□□□□ -1.89
HOXB3-213ENST00000552000 TRAV1-1A0A0B4J248 108 aa3.21□□□□□ -1.9
HOXB3-213ENST00000552000 FAM74A7A6NL05 159 aa3.21□□□□□ -1.9
HOXB3-213ENST00000552000 H0Y9J4 135 aa3.21□□□□□ -1.9
HOXB3-213ENST00000552000 PEX7O00628 323 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms